| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,106,960 | A→T | 9.2% | I89I (ATT→ATA) | wbbH ← | putative O‑antigen polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,106,960 | 0 | A | T | 9.2% | 571.0 / 34.2 | 191 | I89I (ATT→ATA) | wbbH | putative O‑antigen polymerase |
| Reads supporting (aligned to +/- strand): ref base A (95/78); new base T (13/5); total (108/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
TTCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCATATC > NC_000913/2106813‑2107108 | ttCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAAt > 1:500170/1‑150 (MQ=255) aaCATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGAaataaatacc > 1:213498/1‑148 (MQ=255) cATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCat < 1:219970/150‑1 (MQ=255) cATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCGGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGa > 2:513821/1‑150 (MQ=255) cATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGa < 2:908386/150‑1 (MQ=255) aTCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATTTATAGCataccatcg < 1:620374/150‑8 (MQ=255) aTCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGAc < 1:1617530/150‑1 (MQ=255) tctcTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACt > 1:854820/1‑150 (MQ=255) tctcTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACt < 1:144287/150‑1 (MQ=255) actTATCAAATTCATATAGCTAAGTAAGCTAGTCGCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACttt < 2:1578557/149‑1 (MQ=255) ttATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTc < 2:805245/150‑1 (MQ=255) tATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCt > 2:1143807/1‑150 (MQ=255) cAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGat < 1:695571/150‑1 (MQ=255) aaaTTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGata > 2:1426507/1‑150 (MQ=255) aaaTTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGata < 1:1279317/150‑1 (MQ=255) aTTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATAtt < 2:1394983/150‑1 (MQ=255) aTTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATAtt > 1:928399/1‑150 (MQ=255) cATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGAATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAg > 2:609413/1‑150 (MQ=255) atatAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGa > 1:310908/1‑150 (MQ=255) ataGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAAGAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATc < 2:1173352/150‑1 (MQ=255) taGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCt < 1:182489/150‑1 (MQ=255) taagtaagCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACATTTCTGATATTTAGATCTAATa > 2:103556/1‑150 (MQ=255) aagtaagCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATac > 1:1454222/1‑150 (MQ=255) agCTAGTCCGGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACttt < 1:513821/150‑1 (MQ=255) agCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACttt > 2:1596214/1‑150 (MQ=255) gTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATTATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTc < 1:418216/150‑1 (MQ=255) gTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTc < 1:733330/150‑1 (MQ=255) gTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTc > 1:794184/1‑150 (MQ=255) cccGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCaa < 1:809335/150‑1 (MQ=255) ccGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATGGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAAt > 1:975682/1‑150 (MQ=255) ccGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAAt < 1:131175/150‑1 (MQ=255) ccGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAAt < 2:1338144/150‑1 (MQ=255) ccGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAAt < 1:451301/150‑1 (MQ=255) cGAACTGCTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTTTGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATa < 1:1361098/150‑1 (MQ=255) cTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACa < 1:1573393/150‑1 (MQ=255) cTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTCCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACa < 1:339829/150‑1 (MQ=255) ggTTGTTACTTAACCTCATGCATATTTATATCATCGAAAAAGATATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATAATTGAGTTTTCTGATATTTAGATCTAATACACTTTCGGTCTATAAACATg < 2:1610670/150‑1 (MQ=255) ggTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATg > 1:1129214/1‑150 (MQ=255) gTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAg > 1:1325092/1‑150 (MQ=255) aCTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGt > 1:275779/1‑150 (MQ=255) tAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTaaa > 1:594234/1‑150 (MQ=255) aCCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATg < 2:1056569/150‑1 (MQ=255) cTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGta > 1:922005/1‑149 (MQ=255) aTGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaaa < 1:1551463/150‑1 (MQ=255) aTGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGCCaaa < 2:1561193/150‑1 (MQ=255) tGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaaaa > 1:1240221/1‑150 (MQ=255) gCATATATATATCATCAAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAAc < 2:690239/150‑1 (MQ=255) cATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACa < 2:339034/150‑1 (MQ=255) atatatatatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACAt < 1:110789/150‑1 (MQ=255) atatatatCATCGAAAAAGAAATTACTAACAATCCTACATTATGCACTTTCTTCGATTGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGTGTAAATGTCAAAACATTg < 2:29375/150‑1 (MQ=255) tatatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCaa > 1:1338252/1‑150 (MQ=255) atatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCaaa > 1:1221042/1‑150 (MQ=255) atatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCaaa > 1:867400/1‑150 (MQ=255) catcGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAg > 2:525405/1‑150 (MQ=255) catcGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAg < 1:709305/150‑1 (MQ=255) atcGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAg < 2:1482054/89‑1 (MQ=255) atcGAAAAAGAAATAACTAACAAGCCTACATTATGCAATTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGa < 1:1421989/150‑1 (MQ=255) atagAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAg > 1:1482054/4‑89 (MQ=255) cGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGaaa > 2:892959/1‑150 (MQ=255) gAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGaaaa > 1:1345706/1‑150 (MQ=255) aaaaaGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGaaaaa < 1:256502/150‑1 (MQ=255) aaaaGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAAt > 1:1149526/1‑150 (MQ=255) aaaGAAATAACTAACAAGCCTACATTATGCGCTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACCCTGTCCGTCAATAAACCTGACAGGGTAAATGTCAAAACATTGCAAAGTAGatggatc > 2:784293/1‑144 (MQ=255) aaGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCa > 1:893862/1‑150 (MQ=255) aaGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCa > 1:678825/1‑150 (MQ=255) aaaTAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACg < 1:1505185/150‑1 (MQ=255) aaTAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGt < 2:423547/150‑1 (MQ=255) taactaacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAg > 2:1411796/1‑150 (MQ=255) aaacaaacaACCCTACATAATGCACTTTCTACGATGGTATCCTAAAAATAGCATTATAGACTTTTCTGATATTTAGATCTAAAACACTATCCGTCAAAAAACATGACAGCGTAAATGTCAAAACATTCCAAAGTAGAAAAATCAACGTAg < 2:539789/149‑1 (MQ=255) aactaacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGc > 1:565094/1‑150 (MQ=255) aacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCa < 1:647515/150‑1 (MQ=255) cAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCAtt > 2:861288/1‑150 (MQ=255) tACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTg < 2:1604412/150‑1 (MQ=255) ttATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGaaaa > 2:507209/1‑150 (MQ=255) tGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCa < 1:1037344/150‑1 (MQ=255) gCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCat < 2:401799/150‑1 (MQ=255) gCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCat > 1:835739/1‑150 (MQ=255) cTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatata > 2:763267/1‑150 (MQ=255) ttcttcGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAATGCatataaa > 1:589627/1‑148 (MQ=255) ttcGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCt > 1:441394/1‑150 (MQ=255) tcGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTg < 1:783309/150‑1 (MQ=255) cGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGa > 1:995006/1‑150 (MQ=255) tcaataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGAc > 2:1217238/7‑150 (MQ=255) caataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACg > 1:1529056/6‑150 (MQ=255) caataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACg > 1:396951/6‑150 (MQ=255) tGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGt < 2:928575/150‑1 (MQ=255) tGGTATGCAATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGt < 2:213498/150‑1 (MQ=255) ataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGtt > 1:1025796/4‑150 (MQ=255) gTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTa < 2:1200046/150‑1 (MQ=255) gTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTa > 1:1296923/1‑150 (MQ=255) gTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTa > 1:385559/1‑150 (MQ=255) aaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGtt > 1:1608240/2‑148 (MQ=255) gCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTc > 1:1043828/1‑150 (MQ=255) gCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTc < 2:1116159/150‑1 (MQ=255) cTATAAATGGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCa < 2:975682/150‑1 (MQ=255) cTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCa < 1:892959/150‑1 (MQ=255) cTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCa > 1:572782/1‑150 (MQ=255) taAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCatat > 2:720585/1‑150 (MQ=255) taAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCatat > 1:754374/1‑150 (MQ=255) taAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCatat > 1:135338/1‑150 (MQ=255) | TTCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCATATC > NC_000913/2106813‑2107108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |