Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,496,612 C→T 5.6% intergenic (+47/‑309) lpxP → / → ypdK palmitoleoyl acyltransferase/putative membrane protein YpdK

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,496,6120CT 5.6% 333.8 / 6.2 106intergenic (+47/‑309)lpxP/ypdKpalmitoleoyl acyltransferase/putative membrane protein YpdK
Reads supporting (aligned to +/- strand):  ref base C (59/41);  new base T (2/4);  total (61/45)
Fisher's exact test for biased strand distribution p-value = 3.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.12e-01

Only 100 of 109 total aligned reads displayed.

CAAGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAGGC  >  NC_000913/2496463‑2496761
                                                                                                                                                     |                                                                                                                                                     
cAAGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTc                                                                                                                                                       >  1:508842/1‑150 (MQ=255)
  aGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTGCCTCCTCAAATCGGCCATAATAACCTCAt                                                                                                                                                     >  1:691371/1‑150 (MQ=255)
  aGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCATCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCAt                                                                                                                                                     >  2:1350588/1‑150 (MQ=255)
     ttATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGt                                                                                                                                                  >  1:952059/1‑150 (MQ=255)
        tCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGtttt                                                                                                                                               <  2:389976/150‑1 (MQ=255)
          gagaAAGAGATCATGCGCGCACCGGTGCTGTACCTCTGGAGCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTTACAAACTGCTCTTACTCTTTCCCTCCTCAACTCGGCCATAATTACCTCATGGTTTTTa                                                                                                                                             <  2:489099/150‑1 (MQ=255)
          gagaAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTa                                                                                                                                             >  1:119148/1‑150 (MQ=255)
          gagaAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTa                                                                                                                                             >  2:48701/1‑150 (MQ=255)
           agaAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTAt                                                                                                                                            >  1:1004056/1‑150 (MQ=255)
            gaAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATg                                                                                                                                           >  1:1076209/1‑150 (MQ=255)
             aaaGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAAAAACCATGAGGTTATTATgg                                                                                                                                          <  1:1072686/150‑1 (MQ=255)
               agagATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAAAAACCATGAGGTTATTATGGcc                                                                                                                                        <  1:1115926/150‑2 (MQ=255)
               agagATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAAAAACCATGAGGTTATTATGGcc                                                                                                                                        <  2:169848/150‑2 (MQ=255)
                gagaTCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCtt                                                                                                                                       >  2:162528/1‑150 (MQ=255)
                  gaTCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCtttt                                                                                                                                     >  2:1502742/1‑150 (MQ=255)
                  gaTCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAAAAACCATGAGGTTATTATGGccgat                                                                                                                                     <  1:667105/150‑5 (MQ=255)
                     cATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTc                                                                                                                                  >  2:193591/1‑150 (MQ=255)
                      aTGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCt                                                                                                                                 >  1:1391728/1‑150 (MQ=255)
                              aCCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGttt                                                                                                                         >  2:532456/1‑150 (MQ=255)
                                 ggAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGtttttt                                                                                                                      <  1:1445504/150‑1 (MQ=255)
                                    gCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCt                                                                                                                   >  2:1213936/1‑150 (MQ=255)
                                      aGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTc                                                                                                                 >  1:675074/1‑150 (MQ=255)
                                      aGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGACTTTTTTCTTAAGGTTTTTTCCTTc                                                                                                                 >  2:1148351/1‑150 (MQ=255)
                                        tACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGc                                                                                                               <  1:1292896/150‑1 (MQ=255)
                                          ccTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTg                                                                                                             <  1:1344951/150‑1 (MQ=255)
                                          ccTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTg                                                                                                             <  1:796017/150‑1 (MQ=255)
                                            tctGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGaa                                                                                                           <  1:1343342/150‑1 (MQ=255)
                                                 aTCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCt                                                                                                      >  2:212109/1‑150 (MQ=255)
                                                 aTCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCt                                                                                                      <  1:713839/150‑1 (MQ=255)
                                                 aTCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCt                                                                                                      <  2:1310117/150‑1 (MQ=255)
                                                 aTCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCt                                                                                                      >  1:669736/1‑150 (MQ=255)
                                                    cACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAat                                                                                                   >  2:262966/1‑150 (MQ=255)
                                                    cACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAat                                                                                                   <  2:1049703/150‑1 (MQ=255)
                                                          cGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTAc                                                                                             <  2:1291929/150‑1 (MQ=255)
                                                            cTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCg                                                                                           <  1:193591/150‑1 (MQ=255)
                                                               tAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCa                                                                                        >  1:410809/1‑150 (MQ=255)
                                                                aaaaCGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAg                                                                                       <  2:371425/150‑1 (MQ=255)
                                                                aaaaCGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAg                                                                                       >  1:1369549/1‑150 (MQ=255)
                                                                 aaaCGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGa                                                                                      >  2:56047/1‑150 (MQ=255)
                                                                    cgcgCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCTTGGTTTTTATGGCTTTTTTCTTAATGTTTTTTACTTGGCTTAATATCTAATTATTACCGTAAGAAAt                                                                                   <  2:427399/150‑1 (MQ=255)
                                                                    cgcgCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAAt                                                                                   <  2:508842/150‑1 (MQ=255)
                                                                    cgcgCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAAt                                                                                   >  1:1259442/1‑150 (MQ=255)
                                                                         ccGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGTCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAAc                                                                              <  1:1148351/150‑1 (MQ=255)
                                                                         ccGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAAc                                                                              <  1:544766/150‑1 (MQ=255)
                                                                          cGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTAACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACt                                                                             <  2:542936/150‑1 (MQ=255)
                                                                              gggAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCg                                                                         >  1:145225/1‑150 (MQ=255)
                                                                              gggAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTCCGTCAGAAATTAAACTGTCGc                                                                        >  1:374710/1‑150 (MQ=255)
                                                                                    aTCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGata                                                                   >  1:520287/1‑150 (MQ=255)
                                                                                    aTCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGata                                                                   <  2:685112/150‑1 (MQ=255)
                                                                                       gtcgtTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTAACTTAAGGTTTTTTCCTTCGCTCAATATCTAATTTTTACCGTCAGAAATTAAACTTTCGCAGAAATga                                                                >  2:819975/1‑150 (MQ=255)
                                                                                        tcgtTGTACATTTAACAAACTTCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATgag                                                               <  2:1110642/150‑1 (MQ=255)
                                                                                        tcgtTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATAGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATgag                                                               >  1:846290/1‑150 (MQ=255)
                                                                                          gtTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGac                                                             <  1:281554/150‑1 (MQ=255)
                                                                                             ttACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACt                                                          <  2:352737/149‑1 (MQ=255)
                                                                                             gTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCCGCCATAATAACCTCATGGTTTTTATTGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACt                                                          <  2:1604747/150‑1 (MQ=255)
                                                                                              tACATTTAACAAACTGCTCTTACTCTTACCCTCCTCAAATCGGCCATAAAAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACAGTCAGAAATTAAACTGTAGCCGATATGAGACACtt                                                         >  2:1185092/1‑150 (MQ=255)
                                                                                                cATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGt                                                       <  1:689762/150‑1 (MQ=255)
                                                                                                cATTTAACAAACTGCTCTTACTCTGTCCCTCCTAAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGt                                                       >  1:1251868/1‑150 (MQ=255)
                                                                                                 aTTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTa                                                      >  2:230058/1‑150 (MQ=255)
                                                                                                  tttAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTaa                                                     >  1:1541550/1‑150 (MQ=255)
                                                                                                    tAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTg                                                        >  2:121475/1‑145 (MQ=255)
                                                                                                    tAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTg                                                        <  1:121475/145‑1 (MQ=255)
                                                                                                    tAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGt                                                   >  1:82206/1‑150 (MQ=255)
                                                                                                            tGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTaaaa                                           <  2:1369549/150‑1 (MQ=255)
                                                                                                              ctctTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGt                                         >  2:1378086/1‑150 (MQ=255)
                                                                                                               tctTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTa                                        >  1:1600860/1‑150 (MQ=255)
                                                                                                               tctTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTa                                        <  2:1325382/150‑1 (MQ=255)
                                                                                                                ctTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTaa                                       >  2:73809/1‑150 (MQ=255)
                                                                                                                  tACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAAt                                     >  1:56474/1‑150 (MQ=255)
                                                                                                                   aCTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATa                                    <  1:363378/150‑1 (MQ=255)
                                                                                                                   aCTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATa                                    <  1:1156095/150‑1 (MQ=255)
                                                                                                                     tctTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAATTAAg                                  <  2:28745/150‑1 (MQ=255)
                                                                                                                     tctTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAg                                  >  1:1430133/1‑150 (MQ=255)
                                                                                                                      ctTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGa                                 <  2:1396267/150‑1 (MQ=255)
                                                                                                                         tCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGaaaa                              >  1:1520829/1‑150 (MQ=255)
                                                                                                                          cccTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAAt                             <  1:918859/150‑1 (MQ=255)
                                                                                                                           cctcctCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATg                            <  2:1541550/150‑1 (MQ=255)
                                                                                                                               ctcAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCctc                        >  2:275552/1‑150 (MQ=255)
                                                                                                                                tcAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCctct                       >  1:109586/1‑150 (MQ=255)
                                                                                                                                 cAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCtt                      >  2:1479323/1‑150 (MQ=255)
                                                                                                                                 cAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCtt                      >  1:1598077/1‑150 (MQ=255)
                                                                                                                                  aaaTCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTg                     <  2:119148/150‑1 (MQ=255)
                                                                                                                                   aaTCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGt                    <  1:726014/150‑1 (MQ=255)
                                                                                                                                    aTCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGTAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTaa                                             <  2:1535876/124‑1 (MQ=255)
                                                                                                                                       cgCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCg                >  1:1401284/2‑150 (MQ=255)
                                                                                                                                       agCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCAGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCg                >  1:428180/2‑150 (MQ=255)
                                                                                                                                       agCCATAAAAACCATGAGGTTATTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCg                >  1:140585/2‑150 (MQ=255)
                                                                                                                                        gCCATAAAAACCATGAGGTTATTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGt               >  2:1584519/1‑150 (MQ=255)
                                                                                                                                           ataataACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTc            <  2:1004056/150‑1 (MQ=255)
                                                                                                                                            taataaCCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCa           >  1:947975/1‑150 (MQ=255)
                                                                                                                                             aataaCCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGGAAATGCCTCTTGTCTCGTTTCAg          >  2:1053435/1‑150 (MQ=255)
                                                                                                                                              ataaCCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGt         >  2:1223270/1‑150 (MQ=255)
                                                                                                                                               taaCCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGtt        >  1:701502/1‑150 (MQ=255)
                                                                                                                                                  ccTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTa     >  1:275119/1‑150 (MQ=255)
                                                                                                                                                  ccTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTa     >  1:832368/1‑150 (MQ=255)
                                                                                                                                                   cTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTAGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAg    >  2:227927/1‑150 (MQ=255)
                                                                                                                                                    tCATGGTTTTTATTGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAgg   <  1:1502742/150‑1 (MQ=255)
                                                                                                                                                    tCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAgg   >  2:787673/1‑150 (MQ=255)
                                                                                                                                                     cATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAGGc  >  2:122600/1‑150 (MQ=255)
                                                                                                                                                     cATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAGGc  <  2:1391728/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAAGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAATATCTAATTATTACCGTCAGAAATTAAACTGTCGCCGATATGAGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTCTCGTTTCAGTTTTAGGC  >  NC_000913/2496463‑2496761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: