| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,542,928 | C→T | 6.0% | A201T (GCG→ACG) | cysP ← | thiosulfate/sulfate ABC transporter periplasmic binding protein CysP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,542,928 | 0 | C | T | 6.0% | 362.9 / 6.9 | 116 | A201T (GCG→ACG) | cysP | thiosulfate/sulfate ABC transporter periplasmic binding protein CysP |
| Reads supporting (aligned to +/- strand): ref base C (49/59); new base T (2/5); total (51/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
CGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGTTTTCGGG > NC_000913/2542782‑2543076 | cGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGcc < 1:1042268/150‑1 (MQ=255) gCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCa < 1:97866/150‑1 (MQ=255) gCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCa < 2:1096660/150‑1 (MQ=255) ccACCGGGAATTCCGACAGAATGTTCGATTTCGTAATCACCACTTCAAACCCCTGCTCTTCATACTGTTTACGGATGTTGTTAACTTCCGATTCGAAGCTAATCAGCACATCGCCAAGGCCGCGCTCGCCAAAAGTCGTGGTCGCGCCAc > 2:902710/1‑150 (MQ=255) cACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTCACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACg > 1:177759/1‑150 (MQ=255) ccGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGAc > 1:1067085/1‑150 (MQ=255) cGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGAcc < 1:1480519/150‑1 (MQ=255) aaTTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCa < 2:69375/150‑1 (MQ=255) aaTTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGCGGTCGTGGCGCGAccacca < 1:1475724/150‑1 (MQ=255) aTTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGCGGTCGTGGCGCGAccaccac < 1:22207/150‑2 (MQ=255) aTTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGCGGTCGTGGCGCGAccaccac < 1:389813/150‑2 (MQ=255) ccGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTAt < 1:938167/150‑1 (MQ=255) cGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATc < 2:373869/150‑1 (MQ=255) gCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCg < 2:1493094/150‑1 (MQ=255) gCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCg < 1:1028174/150‑1 (MQ=255) ccAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGa < 1:1348522/150‑1 (MQ=255) ccAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGa < 1:1410329/150‑1 (MQ=255) aaTGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAacac < 1:544434/150‑1 (MQ=255) aaTGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAacac > 2:217126/1‑150 (MQ=255) tGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACtt < 1:488947/150‑1 (MQ=255) gTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTc > 2:898922/1‑150 (MQ=255) tGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCaa > 2:902349/1‑150 (MQ=255) tttCGGAATCAACACTTCAAAGCCCTGCGCTTCATACTGTTTACGGAAGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAGCACTTCAACGtt > 2:484752/1‑150 (MQ=255) tCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGTGGCGCGAccaccact < 2:132401/130‑3 (MQ=255) tCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGtttt < 1:239251/150‑1 (MQ=255) tCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGtttt > 2:362927/1‑150 (MQ=255) tCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGtttt < 2:570381/150‑1 (MQ=255) ggAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTc < 2:672806/150‑1 (MQ=255) ggAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGGCGCGCCACGACCGCCAGTATCGAACACTTCATCGTTTTTc < 2:521313/150‑1 (MQ=255) ggAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTGGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTc < 1:1324088/150‑1 (MQ=255) aaTCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAg < 1:1376252/150‑1 (MQ=255) aaTCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAg < 1:1045650/150‑1 (MQ=255) accacTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAAc > 2:1127897/1‑150 (MQ=255) accacTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAAc > 2:1122415/1‑150 (MQ=255) accacTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCAAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAAc > 2:939201/1‑150 (MQ=255) accacTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCAAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAAc > 2:944925/1‑150 (MQ=255) ccacTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACt > 2:1285844/1‑150 (MQ=255) ccacTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACt > 1:703376/1‑150 (MQ=255) ttCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGt < 1:1186719/150‑1 (MQ=255) tCACAGCCCTGCGCGTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTATTCTGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGCGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTc < 2:1377862/150‑1 (MQ=255) tCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTc < 2:1067085/150‑1 (MQ=255) cccTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAAc < 1:1403385/150‑1 (MQ=255) gcgcTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGtt > 2:1301434/1‑150 (MQ=255) aTACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGtttt > 2:1031939/1‑150 (MQ=255) cTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGcc < 1:950093/150‑1 (MQ=255) ttACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTg < 2:434490/150‑1 (MQ=255) ttACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTg < 1:902349/150‑1 (MQ=255) ttACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTg < 2:60430/150‑1 (MQ=255) tACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATAGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGACACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGt > 1:432587/1‑150 (MQ=255) aCGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTc < 2:78286/150‑1 (MQ=255) gATGTTGTTCACTTCCGATTCGAAGCTAATCGGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTcacc < 1:12128/150‑1 (MQ=255) agttgttCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTATTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTcaccac > 1:844006/2‑150 (MQ=255) gttgttCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGGACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCaccacc > 1:9080/1‑150 (MQ=255) ttCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCCCCACCGTcc > 2:64484/1‑149 (MQ=255) ttCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCa > 1:1208715/1‑150 (MQ=255) tCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAg > 2:1084585/1‑150 (MQ=255) tCAATTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAg > 2:766687/1‑150 (MQ=255) aCTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAACAGTGGTGGTCGCGCCACGGCCGCCAGTATCGGACACTGCAGCGTTGTTCGGGAGCTGGGTCATAAACGGTTCGGGTTTGCCTTTGTGGGCGCCGTCAggt > 2:1537087/1‑148 (MQ=255) aCTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACt > 1:843850/1‑118 (MQ=255) aCTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACt < 2:843850/118‑1 (MQ=255) cTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACTCTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCtt > 2:630658/1‑150 (MQ=255) tCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTa < 1:903420/150‑1 (MQ=255) cGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATc > 1:602095/1‑150 (MQ=255) cGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTg > 2:290815/1‑150 (MQ=255) cGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTg > 2:627165/1‑150 (MQ=255) gAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTgc > 2:1384102/1‑150 (MQ=255) cTAATCATCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGccc < 1:885416/150‑1 (MQ=255) aTCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCAt > 2:273994/1‑150 (MQ=255) tCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGAATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATg < 2:177759/150‑1 (MQ=255) acaTCGCAGATGCCGAGCTCGGCTATTGTGGTTGTCGATCCACGAGGGGGAGTATCTAACTATTCTAAGTTTTTCAGGAACTTTTTAATTAACTGTTCGGTTTTGCCTTTCTCACCAACGTCAGCTTTTTCCTCTGCGGCCCTTgccggc < 2:495966/150‑3 (MQ=255) caTCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCa > 2:1163382/1‑150 (MQ=255) aTCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAg < 1:79041/150‑1 (MQ=255) tCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGa > 2:1239858/1‑150 (MQ=255) gCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATa < 1:939201/150‑1 (MQ=255) gCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATa < 1:944925/150‑1 (MQ=255) ccAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAgg < 1:217126/150‑1 (MQ=255) cAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAgg > 2:18983/1‑149 (MQ=255) cAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAgg < 1:18983/149‑1 (MQ=255) cAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGt < 1:1084585/150‑1 (MQ=255) aGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGta < 1:362927/150‑1 (MQ=255) ggCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCTCATGCCGCCAGATAGGtat > 1:1569810/1‑150 (MQ=255) ggCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGtat < 1:1572290/150‑1 (MQ=255) ggCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGtat > 1:432285/1‑150 (MQ=255) ggCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGtat > 1:779517/1‑150 (MQ=255) ccGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGtat < 2:343256/148‑1 (MQ=255) ccGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGtat > 1:343256/1‑148 (MQ=255) cgcTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAAcgc > 2:392690/1‑150 (MQ=255) cTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAAcgcgc < 1:290815/150‑1 (MQ=255) gCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTa > 1:56956/1‑150 (MQ=255) cAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTAc > 1:342268/1‑150 (MQ=255) aaaGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTAccc < 1:1031939/150‑1 (MQ=255) aGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGa < 1:201083/150‑1 (MQ=255) tggtggTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACg < 1:578967/150‑1 (MQ=255) ggcggtCGTGGCGCGACCACCTGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGt > 2:1025157/4‑150 (MQ=255) ggtCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGtttt > 1:1357273/1‑150 (MQ=255) tCGCGCCACGACCGCCAGTATCGGACACTTCAACGTTTTTCAGTAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGTTttcg < 2:9080/150‑1 (MQ=255) cgcgCCACGCCCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCGTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGTTttcgg > 2:121662/1‑150 (MQ=255) cgcgCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGTTttcgg < 1:1301434/150‑1 (MQ=255) gcgcCACGACCGCCAGTATCGTACACTTCAACGTTTTTCAGGAACTGGGTCATAATCTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGGCAGATTGGTATAACGCGCGTTACCCGACGTTttcggg < 2:155272/150‑1 (MQ=255) gcgcCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGTTttcggg < 2:376746/150‑1 (MQ=255) | CGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCGCTTCATACTGTTTACGGATGTTGTTCACTTCCGATTCGAAGCTAATCAGCACATCGCCCAGGCCGCGCTCGGCAAAAGTGGTGGTCGCGCCACGACCGCCAGTATCGAACACTTCAACGTTTTTCAGGAACTGGGTCATAAACTGTTCGGTTTTGCCTTTGTCACCACCGTCAGCTTTATCCGCTGCGCCCCATGCCGCCAGATAGGTATAACGCGCGTTACCCGACGTTTTCGGG > NC_000913/2542782‑2543076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |