| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,620,216 | C→T | 6.3% | intergenic (‑56/+30) | uraA ← / ← upp | hypothetical protein/uracil phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,620,216 | 0 | C | T | 6.3% | 247.4 / 4.4 | 80 | intergenic (‑56/+30) | uraA/upp | hypothetical protein/uracil phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (41/33); new base T (3/2); total (44/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.10e-01 | |||||||||||
CCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTGCGCTTTTTC > NC_000913/2620072‑2620365 | ccAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTaaa > 1:1403973/1‑150 (MQ=255) aTGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGc < 1:240933/150‑1 (MQ=255) tGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAATCAGACTCTTAAAGTCGGCt > 1:715916/1‑150 (MQ=255) tGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCt > 2:403857/1‑150 (MQ=255) gCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTTTAAGAGTCGGCttt < 1:1200995/150‑1 (MQ=255) cGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTa > 1:336982/1‑150 (MQ=255) aaCAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAat > 1:1331111/1‑150 (MQ=255) aCAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTTTAAGAGTCGGCttttttt < 1:842716/150‑5 (MQ=255) aaTGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAattatt > 1:563666/1‑150 (MQ=255) gTTGCAAACTACCCGGGTTTGGCTGTAAAAGGGGCCGTCATTCACTCCCCCCGATAGCACGGCGCCTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCGTTACTCAAAAAAAAACCCGACTCTTAAAGTCGGCTTTAATTAtttt < 1:606651/150‑1 (MQ=255) gTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTAttttt > 1:1492540/1‑150 (MQ=255) ttGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTa > 1:1010941/1‑150 (MQ=255) tGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTAt < 2:1478271/150‑1 (MQ=255) tAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTAt > 1:1092443/1‑150 (MQ=255) gCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTGTTTATTTc > 2:1219555/1‑150 (MQ=255) ggATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTa < 1:1147081/150‑1 (MQ=255) gATTGTCTGTAAAAGTGGCGGTTTTTCACTCACCCCGTTAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTAc < 1:382014/150‑1 (MQ=255) gTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCaaa > 1:833258/1‑150 (MQ=255) gTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGAGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGAtt > 2:584052/1‑150 (MQ=255) aaaGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTg < 2:1303960/150‑1 (MQ=255) aaaGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCCCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTg < 2:1038076/150‑1 (MQ=255) aaaGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGGCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATCATTTTTATTCTTTATTTCGTACCAAAGATTTTg < 2:1078442/150‑1 (MQ=255) aGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTc < 1:403857/150‑1 (MQ=255) gTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCa > 2:597262/1‑150 (MQ=255) tGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCAc > 2:1457835/1‑150 (MQ=255) ggCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCAcc > 1:1191614/1‑150 (MQ=255) acactCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCg > 2:349348/5‑150 (MQ=255) tttCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCg > 1:627541/1‑150 (MQ=255) tttCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCg > 2:921596/1‑150 (MQ=255) ttCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTATTTATTTCGTACCAAAGATTTTGTCACCGGCATCGc > 1:350401/1‑150 (MQ=255) tcactcacCCCGATAGCAAGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGAGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGcc > 2:887457/1‑150 (MQ=255) actcacCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGa < 1:349348/150‑1 (MQ=255) actcacCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGa < 2:563666/150‑1 (MQ=255) tcacCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAgg < 2:185737/150‑1 (MQ=255) cacCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGc > 2:578413/1‑150 (MQ=255) acCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGcc < 1:578413/150‑1 (MQ=255) ccccGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGccc > 1:469424/1‑150 (MQ=255) ccGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCgg < 1:715425/150‑1 (MQ=255) cGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGa > 1:666479/1‑150 (MQ=255) gATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAACGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGaa > 2:25281/1‑150 (MQ=255) ttAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGaat < 2:833258/149‑1 (MQ=255) tAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGaata > 1:759252/1‑150 (MQ=255) gCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGaataat > 2:970351/1‑150 (MQ=255) cACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATg < 1:602796/150‑1 (MQ=255) cACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGCCATCGCCGAGGCCCGGAATAATg < 2:1458395/150‑1 (MQ=255) gcgcGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATc > 1:51411/1‑150 (MQ=255) gcgTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCg < 2:1331111/150‑1 (MQ=255) gTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTg < 1:591680/150‑1 (MQ=255) gTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTg > 2:1434179/1‑150 (MQ=255) tCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGc > 2:949061/1‑150 (MQ=255) cATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCt < 1:1497739/150‑1 (MQ=255) ttattaaCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGtt < 2:1479920/149‑1 (MQ=255) tattatCGTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTc < 1:829436/150‑1 (MQ=255) tattatCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTc < 2:627541/150‑1 (MQ=255) tattatCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTc < 2:1191614/150‑1 (MQ=255) ttatCCTCTGTATTTTGTGTTATTGGCGCTTTACTA‑AAAAAAAAGACGACTATTAAATTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACAGGCATCGCCGAGGCCAGGAATAATGTATCCGTGCTCGTTCAg < 2:1041182/150‑1 (MQ=255) tatCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGt > 2:1561416/1‑150 (MQ=255) ctctGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCt > 2:383955/1‑150 (MQ=255) tctGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTg < 2:1492540/150‑1 (MQ=255) tGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGAt < 2:1403973/150‑1 (MQ=255) gTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGCGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATc > 2:427549/1‑150 (MQ=255) atGTGTTATAGGCGCTTTTCTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCg > 2:1488237/1‑150 (MQ=255) tttATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTCCGTACCAAAGCTTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGc < 1:1436897/149‑1 (MQ=255) ttATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCg > 2:835884/1‑150 (MQ=255) atatGCGCTTTAATC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGt < 2:802308/150‑1 (MQ=255) gcgcTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCTGCATCGCCGAGGCCCGGAATATTGTATCCGTGCTCGTTCAGTCCCTGATGAATCGATGCGGTATAc < 2:1610684/150‑1 (MQ=255) tACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCg > 2:771048/1‑150 (MQ=255) tcTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGTGGCCCGTAATATTGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGa < 2:135644/149‑1 (MQ=255) aCTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGa < 1:584052/150‑1 (MQ=255) cTC‑AAAAAAAAGCCGCCTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGAc > 2:879710/1‑150 (MQ=255) cTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGAc > 2:1561233/1‑150 (MQ=255) tC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACg < 1:597262/150‑1 (MQ=255) aaaaaaaaGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTc > 2:331413/1‑150 (MQ=255) aaaaaaaGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTcc > 2:564100/1‑150 (MQ=255) aaaaaaaGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTcc > 1:845250/1‑150 (MQ=255) aaaGCCGACTTTAAGAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGt > 1:576629/1‑150 (MQ=255) aaGCCGACTTTAAGAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTg > 2:863785/1‑150 (MQ=255) aGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTgc > 1:353605/1‑150 (MQ=255) gCCGACTTTAAGAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTgcg > 1:1368535/1‑150 (MQ=255) aCTCCTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTGCGCttt < 1:1434179/150‑1 (MQ=255) ctTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTGCGCttt > 1:1262683/1‑147 (MQ=255) ctTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTGCGCttt < 2:1262683/147‑1 (MQ=255) ctTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTGCGCTTTTTc < 2:350401/150‑1 (MQ=255) | CCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTCTTTCACTCACCCCGATAGCACGGCGCGTCATAGTATTATCCTCTGTATTATGTGTTATAGGCGCTTTACTC‑AAAAAAAAGCCGACTCTTAAAGTCGGCTTTAATTATTTTTATTCTTTATTTCGTACCAAAGATTTTGTCACCGGCATCGCCGAGGCCCGGAATAATGTATCCGTGCTCGTTCAGTCCCTGATCAATCGATGCGGTATACAGTTCGACGTCCGGGTGCGCTTTTTC > NC_000913/2620072‑2620365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |