| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,243,916 | T→A | 5.2% | K276* (AAA→TAA) ‡ | uxaC ← | D‑glucoronate/D‑galacturonate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,243,916 | 0 | T | A | 5.2% | 311.1 / 5.1 | 96 | K276* (AAA→TAA) ‡ | uxaC | D‑glucoronate/D‑galacturonate isomerase |
| Reads supporting (aligned to +/- strand): ref base T (46/45); new base A (2/3); total (48/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
CGGACGGTCGTTGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCC > NC_000913/3243767‑3244064 | cGGACGGTCGTTGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGtttt < 2:1099747/150‑1 (MQ=255) ggACGGTCGTTGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCACAGTTTTg > 2:1160828/1‑150 (MQ=255) gACGGTCGTTGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGa < 1:1001885/150‑1 (MQ=255) tCGTTGATGGAGTCAAAGCCTAGATGCGGCCGCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGGCATTGTGGTACTGCTGTACCCAGCCGCGACGTGCATTTTCGGCACCAAGGAACACGAGTACCGCAGTTTTGAACTgt < 2:900430/150‑2 (MQ=255) cGTTGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTgcg > 2:1342525/1‑150 (MQ=255) ttGATGGAGTCAAAGCCTACATCCGGCCCCAGGAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCTCGACGTTCATATTCTGCACCAAGGAACACCAGTACCGCAGTTCAAAACTgcggt < 2:964033/150‑3 (MQ=255) ttGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGcc > 2:1133787/1‑150 (MQ=255) ttGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTCAAAACTgcggt < 2:970342/150‑3 (MQ=255) tGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCa < 2:828206/150‑1 (MQ=255) tGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCa < 2:371170/150‑1 (MQ=255) gATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCAc > 2:1061704/1‑150 (MQ=255) gATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTCAAAACTgcggtac < 1:1534090/150‑5 (MQ=255) aTGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGCCGTGCATATTCGGCCCCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACt > 1:702339/1‑150 (MQ=255) tgcaGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACtt > 2:435296/4‑150 (MQ=255) gTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTg < 1:1008732/150‑1 (MQ=255) aaaGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTgctc < 1:233004/150‑1 (MQ=255) aaaGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTgctc > 1:1519032/1‑150 (MQ=255) aGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTgctcgc > 2:1100082/1‑150 (MQ=255) aGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTgctcgc > 2:1094391/1‑150 (MQ=255) aGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTgctcgc > 2:812570/1‑150 (MQ=255) aCATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAgg > 2:468331/1‑150 (MQ=255) aCATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAgg < 1:105098/150‑1 (MQ=255) aTCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGt < 2:599074/150‑1 (MQ=255) tCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGtt > 1:1322405/1‑150 (MQ=255) cGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTc > 1:1022781/1‑150 (MQ=255) ggCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCg > 1:1595176/1‑150 (MQ=255) gCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCgc > 1:460886/1‑150 (MQ=255) ttGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACgg > 1:909858/1‑150 (MQ=255) tGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGgc > 2:1203309/1‑150 (MQ=255) tGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGCGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGcc < 2:512640/150‑1 (MQ=255) gACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCTCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCa > 2:936971/1‑150 (MQ=255) gACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCa > 2:132806/1‑150 (MQ=255) ggTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGGCGGCGCGCCAGAATGc < 1:547790/150‑1 (MQ=255) ggTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGc < 2:1322405/150‑1 (MQ=255) ggTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGc < 2:21375/150‑1 (MQ=255) ggTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGc < 1:508984/150‑1 (MQ=255) ggTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGc > 1:11612/1‑150 (MQ=255) ttgttATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTg < 2:1595176/150‑1 (MQ=255) gttATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTc < 2:318379/150‑1 (MQ=255) ttattaCGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTcc < 1:1133787/150‑1 (MQ=255) attaCGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGc > 2:1127728/1‑143 (MQ=255) attaCGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGc < 1:1127728/143‑1 (MQ=255) taCGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGtt > 1:1335744/1‑150 (MQ=255) gCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCg < 1:472603/150‑1 (MQ=255) gCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCg < 1:466982/150‑1 (MQ=255) gcgcgcCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCtt > 1:1587465/1‑150 (MQ=255) gcgcgcCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCtt > 1:1441694/1‑150 (MQ=255) gcgcCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCTGCACCAAGGAACACCAGTACCGCAGGTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTGTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCttcg < 2:1486437/150‑1 (MQ=255) cgcCAATGTGGTACTGCTGTACCCAGCCGCGCCGTGCATATTCGGCACCAAGGAACACCAGTACCGAAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGCCGGCGCGCCAGAATGCTGTCCAGTTCCGCttcgt > 2:1540250/1‑150 (MQ=255) gcCAATGTTGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCttcgtt < 1:134288/150‑1 (MQ=255) aaTGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGc < 1:61126/150‑1 (MQ=255) tgtgGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCtt < 1:1531076/150‑1 (MQ=255) gtgGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTc < 1:1433091/150‑1 (MQ=255) gTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGc < 1:435296/150‑1 (MQ=255) aCTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCaa > 1:279366/1‑150 (MQ=255) tgctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACTGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAAc < 2:937229/150‑1 (MQ=255) tgctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAAc < 1:1022878/150‑1 (MQ=255) tgctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAAc > 2:1579362/1‑150 (MQ=255) tgctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAAc < 1:1318564/150‑1 (MQ=255) gctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACa < 2:1441694/150‑1 (MQ=255) tgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATc > 2:1266782/1‑150 (MQ=255) aCCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcacc < 2:823602/150‑1 (MQ=255) aCCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcacc > 1:1455383/1‑150 (MQ=255) cccAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcacca > 1:595091/1‑150 (MQ=255) cccAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcacca > 2:790081/1‑150 (MQ=255) cAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACGTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACcaca > 1:496960/1‑150 (MQ=255) gcgACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAg > 2:455227/1‑150 (MQ=255) tGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTg < 1:734045/150‑1 (MQ=255) tGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTATGAACTGCGCCACTTCGTCCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTACGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTg > 2:1184303/1‑150 (MQ=255) gCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCGAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAACCATCACCACATCCAGCGCGTgg > 2:408579/1‑150 (MQ=255) gCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTgg < 2:900495/150‑1 (MQ=255) cATATTCGGCACCAAGGAACACCAGTACCACAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGt < 1:1160828/150‑1 (MQ=255) atatTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTc < 2:734171/150‑1 (MQ=255) tatTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCa > 1:450367/1‑150 (MQ=255) tatTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCa > 1:407323/1‑150 (MQ=255) tatTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCa > 1:1621514/1‑150 (MQ=255) atTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAg < 2:1621514/150‑1 (MQ=255) atTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAg > 1:277425/1‑150 (MQ=255) ttCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGa > 2:250006/1‑150 (MQ=255) cACCAAGGAAGACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACtt < 1:1094391/150‑1 (MQ=255) cACCAAGGAAGACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACtt < 1:1100082/150‑1 (MQ=255) aCCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACttt < 1:297226/150‑1 (MQ=255) ccAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCCGCGCGTGGTCAGACACTTTa > 2:1111108/1‑150 (MQ=255) ccAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTa > 1:1289187/1‑150 (MQ=255) aaGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACa < 1:936971/150‑1 (MQ=255) aaGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACa < 1:1224492/150‑1 (MQ=255) aaGGAACACCAGTACCGCAATTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACa < 1:200484/150‑1 (MQ=255) acCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGa > 1:353565/1‑150 (MQ=255) ccAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAg < 2:1022781/150‑1 (MQ=255) ccAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAg > 1:571562/1‑150 (MQ=255) ccAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAg > 1:198983/1‑150 (MQ=255) cAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCGCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAgc < 1:878428/150‑1 (MQ=255) gtggcGCAGTTCAAAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAgcgg > 1:486413/5‑150 (MQ=255) tACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAgcggc < 1:1061704/150‑1 (MQ=255) ggcGCAGTTCAAAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAgcggcg > 2:1480373/3‑150 (MQ=255) ccGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGa > 1:43718/1‑150 (MQ=255) aGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTAGTCAGACACTTTACAGCCGTGAGCGGCGAAGTg < 2:146628/150‑1 (MQ=255) ttttGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGAt < 1:812570/150‑1 (MQ=255) tttGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATc < 1:132806/150‑1 (MQ=255) ttGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCCGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATcc < 1:1111108/150‑1 (MQ=255) | CGGACGGTCGTTGATGGAGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCC > NC_000913/3243767‑3244064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |