| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,298,438 | T→A | 5.1% | N137Y (AAC→TAC) ‡ | yraR ← | putative nucleoside‑diphosphate‑sugar epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,298,438 | 0 | T | A | 5.1% | 316.9 / 4.9 | 97 | N137Y (AAC→TAC) ‡ | yraR | putative nucleoside‑diphosphate‑sugar epimerase |
| Reads supporting (aligned to +/- strand): ref base T (42/50); new base A (2/3); total (44/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-01 | |||||||||||
CATGACCCGCGCCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGT > NC_000913/3298289‑3298584 | cATGACCCGCGCCACGTCTCTCGCATCAATGGATTTCAAGTTACATGGTAACAAAAGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGtt > 1:991165/1‑150 (MQ=255) cgcgCCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCg < 1:1408792/150‑1 (MQ=255) cgcgCCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCg < 1:1403092/150‑1 (MQ=255) cgcgCCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGCCCAGAACTGGCCg > 1:385698/1‑150 (MQ=255) cgcCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGAt < 2:1520918/150‑1 (MQ=255) gcCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGAtt < 2:52174/150‑1 (MQ=255) gcCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGCCCAGAACTGGCCGaaa < 1:539677/150‑3 (MQ=255) gcCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGCCCAGAACTGGCCGaaa < 2:385698/150‑3 (MQ=255) cACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTaa > 2:1203884/1‑150 (MQ=255) tctctcGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGct > 1:1261683/1‑150 (MQ=255) tctctcGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGct < 1:1113893/150‑1 (MQ=255) ctctcGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGctt > 2:892863/1‑150 (MQ=255) ctcGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGcttct > 1:1312596/1‑150 (MQ=255) ctcGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGcttct > 2:871799/1‑150 (MQ=255) ctcGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGAGATTAATGcttct > 1:14000/1‑150 (MQ=255) gCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTcc > 2:830129/1‑150 (MQ=255) cATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACTATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGACAGTTCTGGGCGATTAATGCttcttcaa > 2:542089/1‑148 (MQ=255) cATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCa < 2:1345165/150‑1 (MQ=255) tCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAtc < 2:1296283/150‑1 (MQ=255) cAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAtct < 2:1312596/150‑1 (MQ=255) cAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAtct > 2:1268961/1‑150 (MQ=255) cAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAtct < 2:924769/150‑1 (MQ=255) aaTGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAtctc > 2:194749/1‑150 (MQ=255) aaTGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAtctc > 1:238104/1‑150 (MQ=255) aTGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTcc < 2:195548/150‑1 (MQ=255) aTGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTcc < 2:1210939/150‑1 (MQ=255) aTGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTcc < 1:1390352/150‑1 (MQ=255) tttCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCttt > 1:655789/1‑150 (MQ=255) ttCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTg > 2:675058/1‑150 (MQ=255) tCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGa < 2:655789/150‑1 (MQ=255) cAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGAcg < 1:206486/150‑1 (MQ=255) gTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGAcgcg < 1:194749/150‑1 (MQ=255) ttACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCgg < 1:1104195/150‑1 (MQ=255) ttACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCgg < 1:1109907/150‑1 (MQ=255) ttACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCgg < 1:1129953/150‑1 (MQ=255) tACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGt < 1:768802/150‑1 (MQ=255) tACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGt < 1:1339536/150‑1 (MQ=255) aCCTGGTAACAAACGGAACAGCGTCGCAAAAAGCGTTTCCTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGAGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAAAGCTTCTACCATCTCCACTTTGACTCGGtt > 1:685478/1‑150 (MQ=255) aCCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGtt < 2:1454785/150‑1 (MQ=255) ccTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTta < 1:520412/150‑1 (MQ=255) ggTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGGTTGCGACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAg < 2:1220182/150‑1 (MQ=255) tAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGCCCAGAACTGGCCGaaat > 1:14454/1‑110 (MQ=255) tAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGCCCAGAACTGGCCGaaat < 2:14454/113‑4 (MQ=255) cAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGaaaaa > 1:1275872/1‑150 (MQ=255) aCGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACgg > 1:968583/1‑150 (MQ=255) ggtatcAGCGGCGCATTAAGCGTTTCGTTCTTGCGGTTTTTGGTACGATAGCCCAGTAACATCGACTGGGTTGCAATGGTAAATTTCGGACAGTTCTGGGCTATTAATGCTTCTTACATCTCGCCTTTGACGCGGTTATAGAAAAACgtc < 2:1437930/145‑3 (MQ=255) cGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGc < 2:1267586/150‑1 (MQ=255) ggAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCAGCTCCCCTTTGACGCGGTTATAGAAAAACGGCg > 2:396240/1‑150 (MQ=255) cAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTg < 1:846543/150‑1 (MQ=255) aGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTgg > 2:38803/1‑150 (MQ=255) aaaaaGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGTTTATAGAAAAACGGCGAGTGGGCATTGGc < 1:1053041/150‑1 (MQ=255) aaaaaGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCAtt < 2:1632540/147‑1 (MQ=255) aaaaaGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCAtt > 1:1632540/1‑147 (MQ=255) aaaaaGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGc < 2:968583/150‑1 (MQ=255) aaGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCAcc < 1:830129/150‑1 (MQ=255) gCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCAAGTGGGCATTGGCACCCa < 2:766536/150‑1 (MQ=255) tttCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCg < 2:1087917/150‑1 (MQ=255) gTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACt < 2:709522/150‑1 (MQ=255) gTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACt > 1:709522/1‑150 (MQ=255) ttCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTg < 2:983778/150‑1 (MQ=255) aTCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACt > 1:687394/1‑150 (MQ=255) aTCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTCGCACCCATCGCACTGAca > 2:1306957/1‑149 (MQ=255) tCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTa < 1:675058/150‑1 (MQ=255) cGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTAcc < 1:1203884/150‑1 (MQ=255) gCTGTTTGCTACGATCGCACAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCATTTCTTGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCa < 1:542089/150‑1 (MQ=255) gTTTGCTACGATCGCCCACTAACATCGACGGGGGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTATTGCTTCTTCCAACTCCCCTTTGACGCGGTTATAGAAATACGGCGAGTGGGCATTGGAACCCATCCCACTGACTACCAACa > 2:71628/1‑150 (MQ=255) ttGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACata < 1:931498/150‑1 (MQ=255) tGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACatat > 1:426286/1‑150 (MQ=255) gCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATAtg < 2:238104/150‑1 (MQ=255) cTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATAtgc > 2:773023/1‑150 (MQ=255) tACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATAtgct > 1:1500008/1‑150 (MQ=255) cGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATAtgctgc > 1:503977/1‑150 (MQ=255) cGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATAtgctgc > 1:922564/1‑150 (MQ=255) cGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATAtgctgc < 2:155186/150‑1 (MQ=255) aTCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTgcgc > 2:1085539/1‑150 (MQ=255) cGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTgcgcgc < 1:773023/150‑1 (MQ=255) gCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGcc > 1:1454596/1‑150 (MQ=255) gCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGcc < 1:1400363/150‑1 (MQ=255) gCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGcc > 1:463705/1‑150 (MQ=255) cccAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGccc > 1:693301/1‑150 (MQ=255) cAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAg > 1:1106586/1‑150 (MQ=255) gTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTc > 2:1448736/1‑150 (MQ=255) gTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTc < 1:339781/150‑1 (MQ=255) aaCATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTcgc < 1:871799/150‑1 (MQ=255) cATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTcgccg > 1:613614/1‑150 (MQ=255) gACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAg > 2:922401/1‑140 (MQ=255) gACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAg < 1:922401/140‑1 (MQ=255) gACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCg > 1:1021187/1‑150 (MQ=255) aCGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCgg < 1:485210/150‑1 (MQ=255) ggCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTa > 1:744498/1‑150 (MQ=255) tGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTAt < 2:1167938/150‑1 (MQ=255) gTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATcc > 2:144560/1‑150 (MQ=255) gTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATcc > 2:1406982/1‑150 (MQ=255) tCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCa > 1:492408/1‑150 (MQ=255) aaTTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACt < 1:930468/150‑1 (MQ=255) aTTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTa < 2:627880/150‑1 (MQ=255) aGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCgtgt < 1:1212942/150‑1 (MQ=255) aGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATAGCACTGACTACCAACATATAATGCGAGCCCAGTCGACGCCCGGTTAAAGCGGTATCCACTAACAGAgtca > 1:705742/1‑148 (MQ=255) | CATGACCCGCGCCACGTCTCTCGCATCAATGGATTTCCAGTTACCTGGTAACAAACGGAACAGCGGCGCAAAAAGCGTTTCGTTCATCCGCTGTTTGCTACGATCGCCCAGTAACATCGACGGGCGAGCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAAAAACGGCGAGTGGGCATTGGCACCCATCGCACTGACTACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGT > NC_000913/3298289‑3298584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |