| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 557,866 | G→T | 5.0% | intergenic (‑125/‑346) | folD ← / → sfmA | bifunctional 5,10‑methylene‑tetrahydrofolate dehydrogenase/ 5,10‑methylene‑tetrahydrofolate cyclohydrolase/putative fimbrial protein SfmA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 557,866 | 0 | G | T | 5.0% | 367.9 / 3.2 | 109 | intergenic (‑125/‑346) | folD/sfmA | bifunctional 5,10‑methylene‑tetrahydrofolate dehydrogenase/ 5,10‑methylene‑tetrahydrofolate cyclohydrolase/putative fimbrial protein SfmA |
| Reads supporting (aligned to +/- strand): ref base G (48/55); new base T (2/4); total (50/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CGTCAATAATCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAATTTACCGCTTCA > NC_000913/557720‑558015 | cGTCAATAATCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCAc < 2:981959/150‑1 (MQ=255) aataatCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTc > 2:1203769/1‑150 (MQ=255) taatCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGc > 2:555054/1‑150 (MQ=255) aatCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGACGGTGCGCCTCACCTTCGca < 2:591993/150‑2 (MQ=255) atCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGACGGTGCGCCTCACCTTCGcaa < 2:1627459/150‑3 (MQ=255) atCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTg < 1:1163776/150‑1 (MQ=255) atCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTg < 1:1169593/150‑1 (MQ=255) atCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTg < 1:130832/150‑1 (MQ=255) cTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTgag < 1:468248/150‑1 (MQ=255) ttGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGACGGTGCGCCTCACCTTCGcaagagg < 2:1218373/150‑7 (MQ=255) ctgcCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCTGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGa < 1:1489497/150‑1 (MQ=255) ctgcCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGa > 1:140391/1‑150 (MQ=255) tgcCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGaa > 1:136679/1‑150 (MQ=255) gcCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGaaa > 1:783629/1‑150 (MQ=255) cATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGc > 1:954320/1‑150 (MQ=255) cATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGc < 2:1378212/150‑1 (MQ=255) aTCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCt < 1:1347871/150‑1 (MQ=255) tCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCtt > 1:96354/1‑150 (MQ=255) gagagagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAt < 2:783629/150‑1 (MQ=255) gagagagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAt < 1:1126063/150‑1 (MQ=255) agagagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAtt > 2:1001228/1‑150 (MQ=255) agagagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAtt > 2:168281/1‑150 (MQ=255) agagagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAtt < 1:1049837/150‑1 (MQ=255) gagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAttttt > 1:1420236/1‑150 (MQ=255) gagGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCAttttt < 2:1075409/150‑1 (MQ=255) gATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGt < 1:413567/150‑1 (MQ=255) ttCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTcc > 2:1052915/1‑150 (MQ=255) tCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCa < 1:1001228/150‑1 (MQ=255) tCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCa < 2:307469/150‑1 (MQ=255) tGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATgg < 2:140852/150‑1 (MQ=255) gTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGc > 2:1243082/1‑150 (MQ=255) tACGTAGATCGAAGGGTATGCGCCTATTTTGTCAGAAGCGTGTCGCGCTTTCAGGTTTCGTTTCATATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGt < 2:177456/150‑1 (MQ=255) tACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGt < 1:1191946/150‑1 (MQ=255) cGTCGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTg < 2:1479457/150‑1 (MQ=255) cGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTg > 1:911548/1‑150 (MQ=255) cGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTg > 1:301821/1‑150 (MQ=255) cGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTg > 1:704480/1‑150 (MQ=255) cGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTg < 1:760641/150‑1 (MQ=255) cGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGGCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTg < 1:1110342/150‑1 (MQ=255) gATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTaaa > 1:144204/1‑150 (MQ=255) gATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTaaa > 1:987582/1‑150 (MQ=255) aacGAAGGGGATGCGCCTATTTAGTCAGAAGCGCGGCGCGCTGTCAGCGATCGTTTCAGATTTAACGCGTGCAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAAt < 2:1563505/148‑1 (MQ=255) tCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATc > 1:739522/1‑150 (MQ=255) gAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTg < 1:900376/150‑1 (MQ=255) ggATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGCTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACt > 2:1253684/1‑150 (MQ=255) gATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTGTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTGATTTTTCGTCCATGATGGCGTTGTAAATCTGGAAGTg < 2:856230/150‑1 (MQ=255) gcgcCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGatt > 2:346619/1‑150 (MQ=255) gcCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGattta > 1:578011/1‑150 (MQ=255) tATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGatttattt < 1:1598940/150‑1 (MQ=255) aTTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTc > 1:1315809/1‑150 (MQ=255) ttttGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTcc < 1:26704/150‑1 (MQ=255) tGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTg < 2:386259/150‑1 (MQ=255) gTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGt < 1:1189964/150‑1 (MQ=255) tCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTc > 2:211852/1‑150 (MQ=255) aGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTa < 2:80673/150‑1 (MQ=255) aaGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAg > 1:1215240/1‑150 (MQ=255) aGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAgg > 1:812245/1‑150 (MQ=255) aGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAgg > 2:722115/1‑150 (MQ=255) ggggCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGAtt < 2:911548/150‑1 (MQ=255) gggCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTa > 1:374314/1‑150 (MQ=255) ggCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTaa < 2:301821/150‑1 (MQ=255) gcgcgcTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAg < 1:77668/150‑1 (MQ=255) tGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAAtt > 1:453198/1‑150 (MQ=255) gTCAGGTTTCTTTTCTGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGATGCTCAGCTTCGCTGAGACTGAAAGCTTGATTTTTCGTCCATGATGGCGTTGTTAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAAttt < 1:746060/150‑1 (MQ=255) aGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAg < 1:72201/150‑1 (MQ=255) cgtttccattcAGATTTATCGCGTGAAGAGAACTCTTGCGAAGGTGAGGCGAAACGTAGATGAGACTGAAAGCTTCATTTTTAGTACATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGa > 2:715089/2‑150 (MQ=255) cgtttcAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATAc < 1:429172/150‑1 (MQ=255) gtttcAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATAcc < 2:738267/150‑1 (MQ=255) gtttcAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATAcc > 2:339824/1‑150 (MQ=255) gtttcAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATAcc < 1:171028/150‑1 (MQ=255) cAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTCAGGATTAAGATAATTTAAGAAATACCTGAc < 2:1020781/150‑1 (MQ=255) cAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGAc < 2:525747/150‑1 (MQ=255) cAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGAc < 1:26235/150‑1 (MQ=255) cAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGAc > 2:1125185/1‑150 (MQ=255) cAGATTTATCGCGTGAAGAGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTAATTGTATAAGGATTAAGATAATTTAAGAAATACCTGAc > 2:41913/1‑150 (MQ=255) gATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACaa > 1:1582591/1‑150 (MQ=255) aTTTATCGCGGGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTTGACCTGATTTAATTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAat < 2:12220/150‑1 (MQ=255) tttATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAata < 1:1052915/150‑1 (MQ=255) ttATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAatat < 2:957098/150‑1 (MQ=255) tATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTATAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAAtata < 1:363632/150‑1 (MQ=255) gcgTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATaaaaa < 1:874628/150‑1 (MQ=255) gcgTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATaaaaa > 1:894250/1‑150 (MQ=255) gAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAAt > 1:647796/1‑150 (MQ=255) aGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAAttt > 1:561781/1‑150 (MQ=255) cGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTc < 2:50269/150‑1 (MQ=255) gACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCa > 1:244654/1‑150 (MQ=255) gtctcagCGACGGTGCGCCTCACCTTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGc > 1:1311973/7‑150 (MQ=255) tctcagCGACGGTGCGCCTCACCTTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGcc > 1:391067/6‑150 (MQ=255) ctctTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGcc < 2:181830/150‑1 (MQ=255) ctctTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGcc < 2:1119145/150‑1 (MQ=255) ctTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGatt > 1:1024193/1‑82 (MQ=255) ctTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGatt < 2:1024193/82‑1 (MQ=255) tGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGt > 1:762842/1‑150 (MQ=255) tGCGAAGGTGAGGCGCACCGTCGCTGAGACAGAAAGCTTCATTTTTAGTACATGATGGCGTTGTAAATATGGAACTGATTTATTTGCTTGTCTAAGGATTAAGATAATTTAAGAAAAAACTGACAAAATAAAAAGAATTTTAACCCTGGt > 2:985803/1‑150 (MQ=255) gCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTa > 1:917278/1‑150 (MQ=255) gAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAAt < 2:1393249/150‑1 (MQ=255) ggTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAATTTa > 1:196809/1‑150 (MQ=255) gcgcACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAATTTACCGCtt > 2:149629/1‑150 (MQ=255) cgcACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAATTTACCGCTTc > 2:406920/1‑150 (MQ=255) gcACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAATTTACCGCTTCa > 2:745308/1‑150 (MQ=255) | CGTCAATAATCTTTGCTGCCATCAGAGAGAGGATTCCATCTGTTACGTAGATCGAAGGGGATGCGCCTATTTTGTCAGAAGCGGGGCGCGCTGTCAGGTTTCGTTTCAGATTTATCGCGTGAAGCGACCTCTTGCGAAGGTGAGGCGCACCGTCGCTGAGACTGAAAGCTTCATTTTTCGTCCATGATGGCGTTGTAAATCTGGAACTGATTTATTTCCTTGTCTAAGGATTAAGATAATTTAAGAAATACCTGACAATATAAAAAGAATTTTCAGCCTGGTAATTTACCGCTTCA > NC_000913/557720‑558015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |