| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,351,776 | T→G | 5.6% | intergenic (‑16/+52) | ycjD ← / ← sapF | DUF559 domain‑containing protein YcjD/putrescine ABC exporter ATP binding protein SapF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,351,776 | 0 | T | G | 5.6% | 403.4 / 12.0 | 126 | intergenic (‑16/+52) | ycjD/sapF | DUF559 domain‑containing protein YcjD/putrescine ABC exporter ATP binding protein SapF |
| Reads supporting (aligned to +/- strand): ref base T (55/64); new base G (5/2); total (60/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TCCCCACTGGATGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGCCAGCA > NC_000913/1351628‑1351922 | tCCCCACTGGATGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGAtt > 1:1103469/1‑150 (MQ=255)tCCCCACTGGATGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGAtt > 2:1124805/1‑150 (MQ=255) ccccACTGGATGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGAttt < 1:1617023/150‑1 (MQ=255) ccACTGGATGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTaa > 2:953885/1‑150 (MQ=255) aTGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTg > 1:578373/1‑150 (MQ=255) gTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCATTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGta > 2:342340/1‑149 (MQ=255) tGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAg > 1:44113/1‑150 (MQ=255) tGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAg > 2:902569/1‑150 (MQ=255) gACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGa > 2:23352/1‑150 (MQ=255) cGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAAt < 2:1542677/150‑1 (MQ=255) cGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAAt < 1:902569/150‑1 (MQ=255) cGGCGAAATTTGAAACCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAAt < 2:512792/150‑1 (MQ=255) ggCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATg < 1:180227/150‑1 (MQ=255) gCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGa < 1:177181/150‑1 (MQ=255) cGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAg > 1:645936/1‑150 (MQ=255) cGAAATTTCAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTACTGCAAAGTGAGATTGCGTCTTAAATCACGCCCATTTCATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAg > 2:1602759/1‑150 (MQ=255) aaaTTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGt > 1:1366742/1‑150 (MQ=255) aaTTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTg < 1:1265129/150‑1 (MQ=255) aaTTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTg < 1:1388807/150‑1 (MQ=255) aaTTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTg < 2:587406/150‑1 (MQ=255) aTTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGa > 1:1242935/1‑150 (MQ=255) tttGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGaa < 2:332944/150‑1 (MQ=255) tttGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTAAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAAAGATTAAATCTTGTCAGAATGAGGTGat < 2:810463/150‑2 (MQ=37) tGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGaat < 1:1002765/149‑1 (MQ=255) tGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGaat > 2:1002765/1‑149 (MQ=255) tCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTg < 1:1144242/150‑1 (MQ=255) cACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTgg > 1:567088/1‑150 (MQ=255) acaaaacCGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGAGTGCGTCTTAAATCACGCCCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGa < 2:570887/147‑1 (MQ=255) aCTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGa < 1:531451/150‑1 (MQ=255) aCTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGa < 1:526008/150‑1 (MQ=255) aCTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCAATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGa < 2:1542672/150‑1 (MQ=255) cTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGaa > 2:645966/1‑150 (MQ=255) tAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAag < 1:285515/150‑1 (MQ=255) aaaCGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAagga < 1:871971/150‑1 (MQ=255) cGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAggagga < 1:1294167/150‑1 (MQ=255) tCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGAtt > 2:64638/1‑150 (MQ=255) ggCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTTCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCa < 2:404040/150‑1 (MQ=255) ggCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCa < 1:1191324/150‑1 (MQ=255) ggCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCa < 1:455655/150‑1 (MQ=255) ggCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCa < 1:1321759/150‑1 (MQ=255) gCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAg < 2:1055027/150‑1 (MQ=255) aGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTa < 2:1103469/150‑1 (MQ=255) atatCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGc < 1:64638/150‑1 (MQ=255) cGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGAta > 1:425067/1‑149 (MQ=255) gCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCt > 1:896459/1‑150 (MQ=255) gCCAGAGCTTTCGTTCCTGCAAACTGACATTGCGTCTTAAATCACGCGAATATGATTTAATTTTATCAATCACCTCATTCTGAC‑‑AAGATTTTATCTTTTCTCAGAATGATGTGAATAATCTGGAAGGAGGATTCAGAAACTTAGCGATCt < 2:1003553/150‑1 (MQ=255) cTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGcc < 1:829011/150‑1 (MQ=255) cTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGcc > 2:506721/1‑150 (MQ=255) cTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGcc > 2:539160/1‑150 (MQ=255) tCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACg < 1:23352/150‑1 (MQ=255) gTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCa > 1:109910/1‑150 (MQ=255) gTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCa < 1:910115/150‑1 (MQ=255) ccTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATcc > 2:564837/1‑150 (MQ=255) tGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAaggagg < 2:804392/113‑1 (MQ=255) tGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAaggagg > 1:804392/1‑113 (MQ=255) tGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATccgc > 2:1251067/1‑150 (MQ=255) cAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATccgccg > 2:1216518/1‑150 (MQ=255) aaGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTc > 1:367463/1‑150 (MQ=255) aGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCa < 1:1216518/150‑1 (MQ=255) aTTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCt > 1:1277388/1‑150 (MQ=255) cTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCaaa > 2:1418877/1‑150 (MQ=255) ttAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCaaaa > 2:405565/1‑150 (MQ=255) tAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAAt > 1:983473/1‑150 (MQ=255) tAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAAt < 1:166695/150‑1 (MQ=255) tAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAAt < 2:1292159/150‑1 (MQ=255) tAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAAt > 1:1108931/1‑150 (MQ=255) tCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGcc > 2:581506/1‑141 (MQ=255) tCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGcc < 1:581506/141‑1 (MQ=255) tCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGAcc < 1:101155/150‑1 (MQ=255) cgcgCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGc < 2:877737/150‑1 (MQ=255) cgcgCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGc < 1:1124805/150‑1 (MQ=255) cgcgCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGc < 2:1120367/150‑1 (MQ=255) aTTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCa > 2:42539/1‑150 (MQ=255) ttGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGc < 2:1284888/150‑1 (MQ=255) ttGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGc > 2:1094906/1‑150 (MQ=255) tGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGcc > 2:734813/1‑150 (MQ=255) tGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGcc < 1:1414701/150‑1 (MQ=255) gATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCAACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCg > 2:553631/1‑150 (MQ=255) ttAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATATGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGttt > 2:608887/1‑150 (MQ=255) tAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTg > 1:40156/1‑150 (MQ=255) tAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTg < 1:342340/150‑1 (MQ=255) ttttATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTg < 1:53787/150‑1 (MQ=255) ttttATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTg < 1:1094906/150‑1 (MQ=255) tttATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGa > 2:1088352/1‑150 (MQ=255) ttcACCTCATTCTGAC‑‑AAAAGATTAAATCTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATg > 1:450902/2‑150 (MQ=38) atcACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATg < 2:1506785/150‑1 (MQ=255) tcACCTCATTCTGAC‑‑AAAAGATTAAATCTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGc > 2:384355/1‑150 (MQ=38) cACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCa < 2:983473/150‑1 (MQ=255) ccTCATTCTGAC‑‑AAGATTTAATCTTTTCTCAGAATGAGCTCAATAATCTGGAAGCAGGATTCAGAAAATTACCGATCTTTACGCCACGCATCCGCCGTCAATGCAACGCAAAAATGAACGGCAATAACCCGAATCGAGACTTCATGCacc > 2:705790/1‑148 (MQ=255) ccTCATTCTGAC‑‑AAAAGATTAAATCTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGAGTCAGAAAATTAGCGATCTTTAGGCCACGCATCCGCAGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCCTGCAgc > 2:334518/1‑150 (MQ=37) cTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAgcg < 2:1083009/150‑1 (MQ=255) aTTCTGACAAAAGATTAAATC‑‑TTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAgcggcg > 1:1444491/1‑150 (MQ=38) cTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATg < 1:1088352/150‑1 (MQ=255) tGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGc > 2:412957/1‑150 (MQ=255) gAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGcc < 1:420836/150‑1 (MQ=255) gAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGcc < 2:1266832/150‑1 (MQ=255) c‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGCCAg > 2:1228683/1‑150 (MQ=255) c‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGCCAg > 2:1410469/1‑150 (MQ=255) aaGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGCCAGc < 2:1366742/150‑1 (MQ=255) aGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGCCAGca > 1:1387156/1‑150 (MQ=255) | TCCCCACTGGATGTTGACGGCGAAATTTGAAATCACTAAAACGTCGGCTGCGAAGATATCGCCAGAGCTTTCGTTCCTGCAAAGTGAGATTGCGTCTTAAATCACGCGCATTTGATTTAATTTTATCTATCACCTCATTCTGAC‑‑AAGATTTAATCTTTTGTCAGAATGAGGTGAATAATCTGGAAGGAGGATTCAGAAAATTAGCGATCTTTACGCCACGCATCCGCCGTCAATGCCTCGCCAAAATGACCGGCAATCAGCCGTTTGGTGAGTTCATGCAGCGGCGATGCCAGCA > NC_000913/1351628‑1351922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |