| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,586,948 | C→A | 6.2% | V263F (GTC→TTC) | ydeQ ← | putative fimbrial adhesin protein YdeQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,586,948 | 0 | C | A | 6.2% | 375.8 / 8.6 | 112 | V263F (GTC→TTC) | ydeQ | putative fimbrial adhesin protein YdeQ |
| Reads supporting (aligned to +/- strand): ref base C (58/47); new base A (4/3); total (62/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GACTAAGGTCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGC > NC_000913/1586800‑1587097 | gACTAAGGTCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACa < 1:1539408/150‑1 (MQ=255) aaGGTCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACAtttt < 1:732032/150‑1 (MQ=255) agttCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTtc < 1:280283/147‑1 (MQ=255) aGGTCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTtc < 1:243301/150‑1 (MQ=255) ggTCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTtct < 1:170226/150‑1 (MQ=255) cAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTccc < 2:1344935/150‑1 (MQ=255) aaaTCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGt > 1:164371/1‑150 (MQ=255) aaTCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGAAAATGTCTccctgg < 2:508186/150‑4 (MQ=255) aTCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGAAAATGTCTccctggg < 2:1030615/150‑5 (MQ=255) tCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGAAAATGTCTccctgggg < 2:186031/150‑6 (MQ=255) cacaATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGcc > 2:905545/1‑150 (MQ=255) attattCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTa > 1:1314946/1‑150 (MQ=255) ttattCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTAt < 2:321137/150‑1 (MQ=255) ttattCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTAt < 1:738562/150‑1 (MQ=255) attCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTAttt > 1:1431200/1‑150 (MQ=255) tCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTAttttt < 1:1468610/150‑1 (MQ=255) cATAGATAAAAGTGACACCAATGAATGACTGGACGGATCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGATTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTc > 2:287696/1‑150 (MQ=255) aTAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTcc > 1:957078/1‑150 (MQ=255) tAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCa > 2:664424/1‑150 (MQ=255) aGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCAt > 1:65783/1‑150 (MQ=255) tAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTAc > 1:735003/1‑150 (MQ=255) aGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCAt > 2:914502/1‑150 (MQ=255) acacCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTaga > 2:1236570/1‑150 (MQ=255) cacCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCCGGGAGCCATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTagag > 1:1547864/1‑150 (MQ=255) cacCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTagag > 2:46736/1‑150 (MQ=255) cacCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTagag > 2:611126/1‑150 (MQ=255) ccAATGACTGACTGGACGGTTGCGGCTGAAAACTTGTTTCCTTGTTGTCCATAGGTTTCGCTTAAACCCAGATGTACTTTTCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTATCCATTATTTTTCCATTACGCATTAGAGTg < 2:1085193/150‑1 (MQ=255) ccAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTg > 1:57646/1‑150 (MQ=255) ccAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTg > 2:267353/1‑150 (MQ=255) cAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGa > 1:469873/1‑150 (MQ=255) cAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGa > 2:293405/1‑150 (MQ=255) tgactgacTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGacac < 1:480654/150‑1 (MQ=255) actgacttGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGATTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTACCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACAccc < 2:1119959/150‑1 (MQ=255) ctgactgGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCa > 2:710667/1‑150 (MQ=255) gactgGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACt < 1:844664/150‑1 (MQ=255) ggACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCg < 2:663713/150‑1 (MQ=255) aCGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGAATTAGAGTGACACCCACTCCCGAt > 1:653651/1‑150 (MQ=255) ccGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACACATTAGAGTGACACCCACTCCCGATGC‑tttt > 1:1490614/1‑150 (MQ=255) ggCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTttgt > 2:1551379/1‑150 (MQ=255) ggCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTAACACCCACTCCCGATGC‑TTttgt > 2:1218853/1‑150 (MQ=255) cggAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTATACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTAGTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTttgttg < 2:951482/148‑1 (MQ=255) cTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTttgttg < 1:907091/150‑1 (MQ=255) gAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACa < 1:1254290/81‑1 (MQ=255) gAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACa > 2:1254290/1‑81 (MQ=255) gAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCa > 2:831665/1‑150 (MQ=255) aaaCCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCAt < 1:710667/150‑1 (MQ=255) aaCCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCGATTACGCATTAGAGTGACTCGCACTCTCGATGA‑TTTTGTTTCATc < 2:1494461/150‑1 (MQ=255) aaCCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATc > 2:335117/1‑150 (MQ=255) aCCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCa > 1:558658/1‑150 (MQ=255) aCCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCa < 2:164371/150‑1 (MQ=255) ttGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGt < 1:532112/150‑1 (MQ=255) gTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGc < 1:893470/150‑1 (MQ=255) tCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCCCTCCCGATGC‑TTTTGTTGCATCAGGTGCtgt > 2:345561/1‑150 (MQ=255) cTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTgtgt > 2:492242/1‑150 (MQ=255) tttGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTAACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAg < 1:1218853/150‑1 (MQ=255) ttGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGc > 1:827381/1‑150 (MQ=255) tGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCa < 1:611126/150‑1 (MQ=255) ccATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGACGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCaaaa > 2:500226/1‑149 (MQ=255) ccATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTATCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAac > 2:351315/1‑150 (MQ=255) aGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACt < 2:469873/150‑1 (MQ=255) ggTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTg < 2:957078/150‑1 (MQ=255) ggTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTg < 1:1205159/150‑1 (MQ=255) ggTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTg > 1:90873/1‑150 (MQ=255) ttGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTc > 2:488133/1‑150 (MQ=255) ttGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTc < 1:943376/150‑1 (MQ=255) cgcTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGc > 2:1326060/1‑150 (MQ=255) gcTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCt > 2:1259647/1‑150 (MQ=255) ttAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTAc < 2:923102/150‑1 (MQ=255) ttAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTAc < 1:281298/150‑1 (MQ=255) aaaCCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTg > 2:517656/1‑150 (MQ=255) cccAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCa > 1:322057/1‑150 (MQ=255) cAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAgt > 1:798738/1‑150 (MQ=255) agGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAgtggt < 1:1411105/150‑1 (MQ=255) ggTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAgtggtg > 1:590606/1‑150 (MQ=255) gTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGtggtgg < 1:287696/150‑1 (MQ=255) aCTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCa > 1:1095742/1‑150 (MQ=255) ttGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGTTGCTGTGTTAGCAAACACTTGTCGGCTACTTTCAGTTGTGGCAccc < 2:170797/150‑1 (MQ=255) cTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGaa < 1:905545/150‑1 (MQ=255) tttatttaCTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCGATTACGCATTAGAGTTACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTAGTGTCAGTGGTGTGACCCGAAAg < 2:735003/150‑1 (MQ=255) tttatttaCTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAg < 2:663557/150‑1 (MQ=255) tttatttaCTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAg < 2:1585889/150‑1 (MQ=255) tttatttaCTGGCCCCAGGGAGACATTTTCACCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAg < 2:1591378/150‑1 (MQ=255) tatttaCTGTCACCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTATGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGAt > 2:1200672/1‑150 (MQ=255) cTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATg < 2:57646/150‑1 (MQ=255) gTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATgag > 2:1604236/1‑150 (MQ=255) ggctacgggAGAAAATGTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATgaga > 1:1536387/7‑150 (MQ=255) gctacgggAGAAAATGTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGagag > 1:1017380/6‑150 (MQ=255) ccccAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TATTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGagag > 2:1108773/1‑150 (MQ=255) ctacgggAGAAAATGTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGc > 2:896127/5‑150 (MQ=255) cccAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGc > 1:1568884/1‑150 (MQ=255) ccAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt > 2:629222/1‑150 (MQ=255) cAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCtt > 1:1152908/1‑150 (MQ=255) acgggAGAAAATGTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGGGAGCtt > 1:1099631/3‑150 (MQ=255) gggAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCAcc > 2:234072/1‑127 (MQ=255) gggAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCAcc < 1:234072/127‑1 (MQ=255) gggAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCtttt > 2:1626393/1‑150 (MQ=255) ggAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTg < 1:914502/150‑1 (MQ=255) gagaCATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGt > 2:720969/1‑150 (MQ=255) agaCATTTTCTCCCGTAGCCAGTATTTTTCCATTACACATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGtt < 2:1490614/150‑1 (MQ=255) cATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGc > 2:1178578/1‑150 (MQ=255) | GACTAAGGTCAAAATCACAATTATTCATAGATAAAAGTGACACCAATGACTGACTGGACGGTTCCGGCTGAAACCTTGTTTCCTGTTTGTCCATAGGTTGCGCTTAAACCCAGAGGTACTTTGCTTTTATTTACTGTCCCCAGGGAGACATTTTCTCCCGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGC‑TTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGC > NC_000913/1586800‑1587097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |