| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,724,618 | A→G | 12.6% | V13A (GTT→GCT) ‡ | sodC ← | superoxide dismutase (Cu‑Zn) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,724,618 | 0 | A | G | 12.6% | 264.0 / 26.3 | 103 | V13A (GTT→GCT) ‡ | sodC | superoxide dismutase (Cu‑Zn) |
| Reads supporting (aligned to +/- strand): ref base A (42/48); new base G (7/6); total (49/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.45e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CACCGGGGGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTAC > NC_000913/1724469‑1724767 | cACCGGGGGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGcaa > 2:599639/1‑150 (MQ=255) ccGGGGGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGcaaca > 2:836912/1‑150 (MQ=255) ggTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgc < 1:376840/150‑1 (MQ=255) ggTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgc > 1:923419/1‑150 (MQ=255) gTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcg < 1:4233/150‑1 (MQ=255) gTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgcg > 2:283739/1‑150 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgc < 2:621228/150‑1 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgc < 1:1190943/150‑1 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgcgc < 1:1275397/150‑1 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTAACAATTGACTGCGCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgc < 2:1112887/150‑1 (MQ=255) tGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgcaca < 1:1298786/150‑4 (MQ=255) gCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGa < 1:1502100/150‑1 (MQ=255) gCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGa > 1:978687/1‑150 (MQ=255) cTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGaa < 2:735498/150‑1 (MQ=255) tttCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgcacaagc < 1:1017346/150‑7 (MQ=255) ttCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATa > 1:1152135/1‑150 (MQ=255) ttCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGAGCCAGAATa > 2:938485/1‑150 (MQ=255) aTCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAg < 1:129421/150‑1 (MQ=255) ggCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGTAACAACCAGCGCCAGAATAGCCAGACTa > 1:858962/1‑150 (MQ=255) ggCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGTAACAACCAGCGCCAGAATAGCCAGACTa > 1:858966/1‑150 (MQ=255) ggCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTa > 1:1072989/1‑150 (MQ=255) gCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGTGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTaa > 1:1057374/1‑150 (MQ=255) gCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTaa > 1:158207/1‑150 (MQ=255) gAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTaaaa < 2:1608504/150‑1 (MQ=255) aCTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGtt < 2:679729/150‑1 (MQ=255) cTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGttt > 1:1425582/1‑150 (MQ=255) cTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGttt < 2:1072989/150‑1 (MQ=255) tCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTc < 2:242501/150‑1 (MQ=255) tCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCACCAGAATAGCCAGACTAAAACGTTTc < 2:653390/150‑1 (MQ=255) ctgACGTTTATCGGTTTCAGTAATGGTTACGCTTCCAATTGACTGCCGTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACAAGCGCCAGAATATCCAGAGTAAAACGTTTCAt < 2:1526810/148‑1 (MQ=255) aGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATa < 2:1624981/150‑1 (MQ=255) ccTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTACAACGTTTCATAggc > 2:1484133/1‑149 (MQ=255) tttATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGAcc > 1:577228/1‑150 (MQ=255) tATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTc < 1:888125/150‑1 (MQ=255) ggTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGtt > 1:227401/1‑150 (MQ=255) tttCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCa < 2:779294/150‑1 (MQ=255) cAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATtg < 2:923419/150‑1 (MQ=255) cAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATtg < 2:929096/150‑1 (MQ=255) cAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATtg > 2:1372147/1‑150 (MQ=255) tGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCAtt > 2:1004874/1‑150 (MQ=255) gTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTcc < 1:559263/150‑1 (MQ=255) gTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTcc < 1:545393/150‑1 (MQ=255) gACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCTCCGGTTGCAACAACGAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTg < 2:1284728/150‑1 (MQ=255) cGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGaa < 1:313929/150‑1 (MQ=255) gCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGTAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATTGGACCTCCGTTCATTGTGCATTCCTGAAt < 2:858966/150‑1 (MQ=255) gCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAAt < 1:938485/150‑1 (MQ=255) tACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATaa > 2:899451/1‑150 (MQ=255) aCCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAg > 1:1276480/1‑150 (MQ=255) ccAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGCCCTCCGTTCATTGTGCATTCCTGAATAAgt > 1:375805/1‑150 (MQ=255) cAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAgtg < 2:800103/150‑1 (MQ=255) aCTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAAcc > 1:1519267/1‑150 (MQ=255) gCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGt < 1:599639/150‑1 (MQ=255) gCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGt > 1:465295/1‑150 (MQ=255) gCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGt > 1:1497188/1‑150 (MQ=255) cccTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTg < 2:656525/150‑1 (MQ=255) cccTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCCGAATAAGTGTAAACCAGTg > 2:76872/1‑150 (MQ=255) cTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGac < 2:234878/150‑1 (MQ=255) aCCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGacac < 1:873892/150‑1 (MQ=255) cccTTGCGACGTGACGAGCTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACAt > 2:1336520/1‑150 (MQ=255) tGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACAttttt < 1:1108333/150‑1 (MQ=255) gCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTg < 2:579999/150‑1 (MQ=255) gCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTg < 1:721607/150‑1 (MQ=255) gACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGACAGAATACCCAGACTAAAACGTTTCATAGGACATCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGaa > 2:1489786/1‑150 (MQ=255) aCGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGTGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAc < 2:1057374/150‑1 (MQ=255) cGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcg > 2:1042588/1‑150 (MQ=255) tGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcggc > 1:1006995/1‑150 (MQ=255) tGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcggc > 1:235709/1‑150 (MQ=255) gACGCGGTTCAACTCGACTTATTCACTGGCATCTTGTGCGCCGCTTGCAACAACCAGAGCCAGAATAGCCAGCCTAAAACGTTTCATAGGACCTCCCTTCATTGTGCATTCCTGAATTAGTGTAAACCAGTGACACATTTTTGAAcggcg > 2:614514/1‑150 (MQ=255) gACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcggcg > 2:341118/1‑150 (MQ=255) cGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACggcggc < 2:858232/150‑1 (MQ=255) aTCTCGACTTTTTCACTGGCAGCTTGTGCTCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTa < 1:788841/150‑1 (MQ=255) aTCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTa < 2:1171314/150‑1 (MQ=255) tcGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCCGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTaaaa < 1:76872/150‑1 (MQ=255) aCTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg < 2:884298/150‑1 (MQ=255) tttCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTa < 2:227401/150‑1 (MQ=255) tttCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGATCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTa < 1:97569/150‑1 (MQ=255) aCTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGt < 1:442404/150‑1 (MQ=255) ggCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAcg > 1:212407/1‑150 (MQ=255) gCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAcgt > 2:784492/1‑150 (MQ=255) cAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAcgtc < 1:1196539/150‑1 (MQ=255) cTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTa > 2:1588031/1‑150 (MQ=255) ttGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAc < 1:1489786/150‑1 (MQ=255) ctggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcc > 2:1020825/4‑150 (MQ=255) ctggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcc > 1:449728/4‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTGATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 1:813623/2‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 2:874822/2‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 1:12914/2‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 1:801206/2‑150 (MQ=255) gcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCa > 1:896811/1‑150 (MQ=255) gcgcCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCa > 2:135955/1‑150 (MQ=255) gcgcCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCa > 1:1554428/1‑150 (MQ=255) ccGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTg < 2:1519267/150‑1 (MQ=255) gCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCtt > 2:157771/1‑150 (MQ=255) caacaaCCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGCCCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCttt > 1:1578574/1‑150 (MQ=255) caacaaCCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCttt > 2:1175830/1‑150 (MQ=255) aacaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTa < 1:585163/150‑1 (MQ=255) aacaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTa < 1:899451/150‑1 (MQ=255) acaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACTGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTAc < 1:1372147/150‑1 (MQ=255) acaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg > 1:263088/1‑117 (MQ=255) acaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg < 2:263088/117‑1 (MQ=255) | CACCGGGGGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTAC > NC_000913/1724469‑1724767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |