| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,724,624 | A→G | 12.3% | L11P (CTG→CCG) | sodC ← | superoxide dismutase (Cu‑Zn) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,724,624 | 0 | A | G | 12.3% | 296.2 / 27.4 | 114 | L11P (CTG→CCG) | sodC | superoxide dismutase (Cu‑Zn) |
| Reads supporting (aligned to +/- strand): ref base A (46/54); new base G (7/7); total (53/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTACGGATA > NC_000913/1724477‑1724772 | ggTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgc > 1:929096/1‑150 (MQ=255) gTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcg < 1:4233/150‑1 (MQ=255) gTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgcg > 2:283739/1‑150 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgc < 2:621228/150‑1 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAgcgc < 1:1275397/150‑1 (MQ=255) tAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTAACAATTGACTGCGCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgc < 2:1112887/150‑1 (MQ=255) tGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgcaca < 1:1298786/150‑4 (MQ=255) gCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGa > 1:978687/1‑150 (MQ=255) gCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGa < 1:1502100/150‑1 (MQ=255) cTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGaa < 2:735498/150‑1 (MQ=255) tttCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCTGGTTGTTGCAACCGgcgcacaagc < 1:1017346/150‑7 (MQ=255) ttCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATa > 1:1152135/1‑150 (MQ=255) ttCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGAGCCAGAATa > 2:938485/1‑150 (MQ=255) aTCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAg < 1:129421/150‑1 (MQ=255) ggCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGTAACAACCAGCGCCAGAATAGCCAGACTa > 1:858962/1‑150 (MQ=255) ggCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGTAACAACCAGCGCCAGAATAGCCAGACTa > 1:858966/1‑150 (MQ=255) ggCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTa > 1:1072989/1‑150 (MQ=255) gCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGTGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTaa > 1:1057374/1‑150 (MQ=255) gCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTaa > 1:158207/1‑150 (MQ=255) cTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGttt > 1:1425582/1‑150 (MQ=255) tCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTc < 2:242501/150‑1 (MQ=255) tCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCACCAGAATAGCCAGACTAAAACGTTTc < 2:653390/150‑1 (MQ=255) ctgACGTTTATCGGTTTCAGTAATGGTTACGCTTCCAATTGACTGCCGTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACAAGCGCCAGAATATCCAGAGTAAAACGTTTCAt < 2:1526810/148‑1 (MQ=255) aGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATa < 2:1624981/150‑1 (MQ=255) gACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAg < 2:3985/150‑1 (MQ=255) ccTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTACAACGTTTCATAggc > 2:1484133/1‑149 (MQ=255) tATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTc < 1:888125/150‑1 (MQ=255) ggTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGtt > 1:227401/1‑150 (MQ=255) ggttCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTc < 1:1232640/148‑1 (MQ=255) tttCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCa < 2:779294/150‑1 (MQ=255) cAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATtg < 2:923419/150‑1 (MQ=255) cAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATtg < 2:929096/150‑1 (MQ=255) gTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATtgtg > 2:1469558/1‑150 (MQ=255) tGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCAtt > 2:1004874/1‑150 (MQ=255) gTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTcc < 1:545393/150‑1 (MQ=255) gTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTcc < 1:559263/150‑1 (MQ=255) gACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCTCCGGTTGCAACAACGAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTg < 2:1284728/150‑1 (MQ=255) cGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGaa > 1:386892/1‑150 (MQ=255) cGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGaa < 1:313929/150‑1 (MQ=255) gCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGTAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATTGGACCTCCGTTCATTGTGCATTCCTGAAt < 2:858966/150‑1 (MQ=255) gCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAAt < 1:938485/150‑1 (MQ=255) cTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATa < 1:1469558/150‑1 (MQ=255) tACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATaa > 2:899451/1‑150 (MQ=255) aCCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAg > 1:1276480/1‑150 (MQ=255) ccAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGCCCTCCGTTCATTGTGCATTCCTGAATAAgt > 1:375805/1‑150 (MQ=255) cAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAgtg < 2:800103/150‑1 (MQ=255) aCTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAAcc > 1:1519267/1‑150 (MQ=255) cTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCa > 1:579999/1‑150 (MQ=255) gCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGt < 1:599639/150‑1 (MQ=255) gCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGt > 1:465295/1‑150 (MQ=255) gCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGt > 1:1497188/1‑150 (MQ=255) cccTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTg < 2:656525/150‑1 (MQ=255) cccTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCCGAATAAGTGTAAACCAGTg > 2:76872/1‑150 (MQ=255) cTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGac < 2:234878/150‑1 (MQ=255) tACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGaca > 2:1108333/1‑150 (MQ=255) aCCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGacac < 1:873892/150‑1 (MQ=255) cccTTGCGACGTGACGAGCTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACAt > 2:1336520/1‑150 (MQ=255) ccTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAACACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACAtt > 2:6848/1‑150 (MQ=255) tGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACAttttt < 1:1108333/150‑1 (MQ=255) gCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTg < 2:579999/150‑1 (MQ=255) gCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTg < 1:721607/150‑1 (MQ=255) gACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGACAGAATACCCAGACTAAAACGTTTCATAGGACATCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGaa > 2:1489786/1‑150 (MQ=255) aCGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGTGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAc < 2:1057374/150‑1 (MQ=255) aCGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAc < 1:836912/150‑1 (MQ=255) cGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcg > 2:1042588/1‑150 (MQ=255) tGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcggc > 1:1006995/1‑150 (MQ=255) tGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcggc > 1:235709/1‑150 (MQ=255) gACGCGGTTCAACTCGACTTATTCACTGGCATCTTGTGCGCCGCTTGCAACAACCAGAGCCAGAATAGCCAGCCTAAAACGTTTCATAGGACCTCCCTTCATTGTGCATTCCTGAATTAGTGTAAACCAGTGACACATTTTTGAAcggcg > 2:614514/1‑150 (MQ=255) cGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACggcggc < 2:858232/150‑1 (MQ=255) aTCTCGACTTTTTCACTGGCAGCTTGTGCTCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTa < 1:788841/150‑1 (MQ=255) aTCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTa < 2:1171314/150‑1 (MQ=255) tcGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCCGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTaaaa < 1:76872/150‑1 (MQ=255) aCTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg < 2:884298/150‑1 (MQ=255) tttCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTa < 2:227401/150‑1 (MQ=255) tttCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGATCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTa < 1:97569/150‑1 (MQ=255) aCTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGt < 1:442404/150‑1 (MQ=255) ggCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAcg > 1:212407/1‑150 (MQ=255) gCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAcgt > 2:784492/1‑150 (MQ=255) cAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAcgtc < 1:1196539/150‑1 (MQ=255) cTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTa > 2:1588031/1‑150 (MQ=255) ttGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAc < 1:1489786/150‑1 (MQ=255) ctggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcc > 2:1020825/4‑150 (MQ=255) ctggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcc > 1:449728/4‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 1:12914/2‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 2:874822/2‑150 (MQ=255) ggcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTAcccc > 1:801206/2‑150 (MQ=255) gcgcTGGTTGTTGCAACCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCa > 1:896811/1‑150 (MQ=255) gcgcCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCa > 2:135955/1‑150 (MQ=255) gcgcCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCa > 1:1554428/1‑150 (MQ=255) ccGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTg < 2:1519267/150‑1 (MQ=255) gCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCtt > 2:157771/1‑150 (MQ=255) caacaaCCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCttt > 2:1175830/1‑150 (MQ=255) aacaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTa < 1:899451/150‑1 (MQ=255) aacaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTa < 1:585163/150‑1 (MQ=255) acaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg < 2:263088/117‑1 (MQ=255) acaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg > 1:263088/1‑117 (MQ=255) acaacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTAc > 2:1624438/1‑150 (MQ=255) caacCGGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTACg < 2:449728/150‑1 (MQ=255) caacCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTACg < 1:1042588/150‑1 (MQ=255) cAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTACGGATa < 1:1175830/150‑1 (MQ=255) | GGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTACGTCGTACCCCAGTGCCGCTTTACGGATA > NC_000913/1724477‑1724772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |