Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,341,824 | T→G | 100% | intergenic (‑196/‑87) | melR ← / → melA | DNA‑binding transcriptional dual regulator MelR/alpha‑galactosidase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,341,824 | 0 | T | G | 100.0% | 149.6 / ‑6.7 | 53 | intergenic (‑196/‑87) | melR/melA | DNA‑binding transcriptional dual regulator MelR/alpha‑galactosidase |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (27/25); minor base C (0/1); total (27/26) | |||||||||||
Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
TGCGAGTGGGAGCACGGTTTTCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTTTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGTTCGACGATTTTC > NC_000913/4341684‑4341961 | tGCGAGTGGGAGCACGGTTTTCACCCTCTTCCCAGAGGGGCGAGGGGACTCTACGAGTATAATAAGACCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTa > 1:330599/1‑143 (MQ=255) cgggTGGGAGCGCGGTTTTCACCCTCTGCCCAGAGGGGCGCGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATg < 2:473397/140‑1 (MQ=255) tGGAAGCACGGTTTTCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACGCAGATTAACTGCTGCTTCACGCAGGATCTGAGTGTATGGGaa < 1:47490/143‑1 (MQ=255) gggAGGACGGTTTTGACCCTCTGCCCAGAGGGGCGAGGGGCCTCTCCGAGTATCATGAGGCCGGAGACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAAt < 2:503977/143‑1 (MQ=255) gAGCACGGTTTTCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGTATCTGAGTGTATGGGAATGc > 2:570181/1‑143 (MQ=255) cGGTTTTCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATAAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAGAGTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAAc > 1:121838/1‑143 (MQ=255) cGGTTTTCACCCTCTTCCCAGAAGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTACCATAAACTCAGATTTACTGCTGCTTCACGCAGGCTCAGAGTGTCTGAGAATGCTCAAc > 2:500258/1‑143 (MQ=255) tttCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGGGTATGGGAATGCTCAACCTgg > 1:83350/1‑143 (MQ=255) tCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTggga > 2:242360/1‑141 (MQ=255) cACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAg > 1:459067/1‑143 (MQ=255) ccTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCCTGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGGTCTGAGTGTGTGGGACTGCTCGACCTGGAAGCCg > 1:407034/1‑143 (MQ=255) ccTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCg > 1:472963/1‑143 (MQ=255) ccTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCCGCCTCACTTAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCg < 1:453770/143‑1 (MQ=255) tctTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCCTGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTACTATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGGATGCTCAACCTGGAAGCCGGa > 2:477952/1‑143 (MQ=255) ctTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGTAAACTCTGCTTTTCAGGTACTTTTTTCCTATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAg < 2:715004/143‑1 (MQ=255) ttCCCCGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGCGCGATCTACTTTGCAGGTAATTTATCCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAgg < 1:369298/143‑1 (MQ=255) cgggggggCGAGGGGACTCCCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTCATTTATTCCCATAAACTCAGATTTACTGCTGCTTCCCGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGtttt < 2:375983/139‑1 (MQ=255) cAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGtttt > 1:782888/1‑143 (MQ=255) agagGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTc < 1:307879/143‑1 (MQ=255) agGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTg < 1:513882/143‑1 (MQ=255) gggCGAGGGGACTCTCCGAGTATCATGAGGCCGAAACCTCTGCTTTTCAGGTAATTTATTCCCATAAACTCCGATTGACTGCTGCTTCACGCAGGAGCCGCCGGTGTGGGAAGGCTCCACCTGCACGCCGGCGGCTTTCTGCa > 2:446918/1‑143 (MQ=255) gACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTGCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCt < 2:374880/143‑1 (MQ=255) tctcCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGcc > 1:8193/1‑143 (MQ=255) ctcCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTGTGCAGATTCGCCTGCCa > 2:55980/1‑143 (MQ=255) tcCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCat > 1:358859/1‑143 (MQ=255) gTATCATGACGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGCTCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCAtgatga < 2:427438/143‑1 (MQ=255) ccGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGTTCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGCGGTTTTCTGCAGATTCGCCTGCCATGATGCAGTTATTcacg > 2:293384/1‑141 (MQ=255) gAAAACTCTGCTTTTCAGGAAATTTATTCCAATAAACTCAGATTTACTGCCGCTTCACGCAGGATCTCAGCGTATGGGAATGCTCCACCTGGAAACCGGAGGTGTTCTGCAGATTCGCCTGCCATGATGACGATATTcacgca > 2:454337/1‑143 (MQ=255) tGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGga > 2:366282/1‑143 (MQ=255) ttttCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGAt > 2:147585/1‑143 (MQ=255) tttCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGgagacc > 1:79873/1‑141 (MQ=255) aGGTAATTTAGTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCa < 1:819959/143‑1 (MQ=255) ggTAATTTATTCCCATGAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCat < 1:574821/143‑1 (MQ=255) tAATTTATTCCCATAACCTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCatga < 2:546701/143‑1 (MQ=255) aTTTATTCCGATAAACTCAGATTTACTGCTGCTTGACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCatgatg < 2:89026/143‑1 (MQ=255) tttATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGt > 2:533610/1‑143 (MQ=255) ttATTCCCATGAACTCTGGTTTACTGCTGCTCAGACCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTc < 2:180622/143‑1 (MQ=255) tATTCCCAGAAGCTCCGATTTACTGCTGCGTCACGCAGGAGCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCt < 1:714806/143‑1 (MQ=255) cccATGAGCTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCAc < 2:353949/143‑1 (MQ=255) aaaGTCAGGTGTACCGCTGCGTCACCCAGGATCTGAGTCTATCGGAATGCTCAACCTGGAAGCCGGAGCTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCaaa < 2:335577/143‑1 (MQ=255) tCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTa > 1:471725/1‑143 (MQ=255) tCAGATTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCGGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTa < 2:653088/143‑1 (MQ=255) tCAGATTTACTGCTGCTTCACGCAGGATATGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCAATGATGAAGTTATTAAAGCAAGACAGGAGAGCTGAATGATGTCTGCGCCCaaaaaga > 2:283171/1‑140 (MQ=255) aGATTTACTGCTGCTGCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACa < 2:337257/143‑1 (MQ=255) aTTTACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACAtt < 2:690332/143‑1 (MQ=255) tttACTGCTGCTTCACGCAGGATCTGAGTGTATGGAAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCAGGATGAAGTTATGCAAGCAAGCCAGGAGATCTGCATGATGGCTGCACCCCAACTTACCttt > 1:643607/1‑143 (MQ=255) tACTGCTGCTTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACATTTAt < 2:472963/143‑1 (MQ=255) gctgctTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGACGGAGGTTTTCTGCAGATTCGCCGGCCATGATGAAGGAATTCAAACAACCCAGGATTTGTGCATGATGCCTGCACCAAAAGTGACATTGATCGgc > 2:855292/1‑143 (MQ=255) ctTCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCACCGAAATATTTTAGAGGTCGGCACCCAAAATTACATTTATCGGCGCTg < 1:604919/143‑1 (MQ=255) tCACGCAGGATCTGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGt > 1:719039/1‑143 (MQ=255) gCAGGATCTGGGTGGATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGTTcga < 2:121838/143‑1 (MQ=255) gCAGGATACGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGGTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAACATTACATTTATCGGCGCTGGTTcga < 1:719481/143‑1 (MQ=255) tGAGTGTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGTTCGACGATTTTc > 2:540943/1‑143 (MQ=255) | TGCGAGTGGGAGCACGGTTTTCACCCTCTTCCCAGAGGGGCGAGGGGACTCTCCGAGTATCATGAGGCCGAAAACTCTGCTTTTCAGGTAATTTATTCCCATAAACTCAGATTTACTGCTGCTTCACGCAGGATCTGAGTTTATGGGAATGCTCAACCTGGAAGCCGGAGGTTTTCTGCAGATTCGCCTGCCATGATGAAGTTATTCAAGCAAGCCAGGAGATCTGCATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGTTCGACGATTTTC > NC_000913/4341684‑4341961 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |