New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1436548 =25 (0.700)191 (5.690) 125/264 0.0 86.7% coding (346/1134 nt) ompN outer membrane porin N
?NC_000913 = 1502024 35 (1.040)coding (463/594 nt) tehB tellurite methyltransferase

Only 100 of 250 total aligned reads displayed.

CTTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGACCCGGTAAGCA  >  NC_000913/1501883‑1502166
                                                                                                                                             |                                                                                                                                              
 ttGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATCCCGCGGATTATCCATGTACCGTCGGCTTCCCGTATGCCTTCAAAGAGGGAGaa                                                                                                                                              <  2:574631‑M2/143‑3 (MQ=255)
 ttGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTGACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaa                                                                                                                                              <  2:500076‑M2/143‑3 (MQ=255)
   gAGGCTAAAGCCATCGCCGGGTCGATTGCCAATATGCAACGCTGCACTAAACCTTGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaatt                                                                                                                                            >  1:330893‑M2/1‑139 (MQ=255)
    aGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAAAGATGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCATGCAAAGAGGCAGattcg                                                                                                                                           <  2:95021‑M2/143‑6 (MQ=255)
      gCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacg                                                                                                                                         <  2:29564‑M2/143‑8 (MQ=255)
      gCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGATACAACATGATTGTGGCGGCGCTGGATACCGCTGATTATCCATGTACCGTCGGCTCCCCGTTTGCCTTCCAAGGCGGAGaattccg                                                                                                                                         <  2:26296‑M2/143‑8 (MQ=255)
      gCTAAAACCATCCCCGGGTTGATTGCCAATATGCAAAGTTGCACTAAACCCGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTGCAAGGAGGGAGagatacg                                                                                                                                         <  1:579070‑M2/143‑8 (MQ=255)
       cTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgt                                                                                                                                        <  1:18347‑M2/143‑9 (MQ=255)
       cTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATAGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgt                                                                                                                                        >  1:113314‑M2/1‑135 (MQ=255)
          aaaCCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGa                                                                                                                                     <  1:475902/143‑1 (MQ=255)
                 ccccGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcga                                                                                                                              >  1:490265‑M2/1‑125 (MQ=255)
                 ccccGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACg                                                                                                                              >  1:228330/1‑143 (MQ=255)
                  cccGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaa                                                                                                                             <  1:187007‑M2/143‑20 (MQ=255)
                   ccGGGTTGGTTGTCAATATGCAAAGTTGTACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCGGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaa                                                                                                                            >  1:221764‑M2/1‑123 (MQ=255)
                   ccGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATGCATGTACCGTCGGCTTCCCGTTTGCCTTGAAAGAGGGAGaagtgggtccgtcatcgaaa                                                                                                                            <  1:14430‑M2/143‑21 (MQ=255)
                   ccGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaa                                                                                                                            >  1:615276‑M2/1‑123 (MQ=255)
                     gggTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaaga                                                                                                                          <  1:533444‑M2/143‑23 (MQ=255)
                       gTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaac                                                                                                                        >  1:378029‑M2/1‑119 (MQ=255)
                        ttGATTGCCAATATGCATCGTTGCACTAAACCTGCTGGTTACAACCTGGTTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCTTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaacc                                                                                                                       >  2:544940‑M2/1‑118 (MQ=255)
                        ttGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGGGGGAGaattacctcagtcagcgaaagaacc                                                                                                                       <  2:304508‑M2/143‑26 (MQ=255)
                        ttGATGCCCAATACGCTTCGTTGCACTAAACCGGGTGGTTACAACAAGATGGTGGCGGCGCAGGCCCCCGCTTATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGCATTACGTCGATATTACGAAGGCTg                                                                                                                       <  1:337566/143‑1 (MQ=255)
                           aTTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGCGGGAGaattacgtccgtaatcgaaagaaccgtc                                                                                                                    <  2:20630‑M2/143‑29 (MQ=255)
                           aTTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaacggta                                                                                                                    <  1:354705‑M2/143‑29 (MQ=255)
                            gtgCCAATACGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaa                                                                                                                   >  1:443784‑M2/2‑114 (MQ=255)
                             tGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaat                                                                                                                  <  1:321118‑M2/143‑31 (MQ=255)
                              gCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtactc                                                                                                                 <  1:602741‑M2/143‑32 (MQ=255)
                               ccAATATGCAACGTTGCACTAAACCTGGTGGTTGCAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatct                                                                                                                >  1:109796‑M2/1‑111 (MQ=255)
                                   tatGCAACGTTGCACTAATCCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaa                                                                                                            >  2:398029‑M2/1‑107 (MQ=255)
                                   tatGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaa                                                                                                            >  2:599844‑M2/1‑107 (MQ=255)
                                       cAACGTTGCACTCAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaattt                                                                                                        >  1:495602‑M2/1‑103 (MQ=255)
                                        aaCGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCACAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttc                                                                                                       <  1:532788‑M2/143‑42 (MQ=255)
                                        aaCGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttc                                                                                                       <  1:504314‑M2/143‑42 (MQ=255)
                                         aCGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttca                                                                                                      >  1:646679‑M2/1‑101 (MQ=255)
                                         aCGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttca                                                                                                      <  1:286013‑M2/143‑43 (MQ=255)
                                              gCACTAAACCTGGTGGTTACAACCTTATTGTGGCGGCTCTGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTCCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccg                                                                                                 >  2:57323‑M2/1‑96 (MQ=255)
                                                  tAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtactctgcaaatttcagcccggcac                                                                                             <  1:102777‑M2/143‑52 (MQ=255)
                                                   aagCCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTACCCATGTACCGACGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaa                                                                                            >  1:90733‑M2/1‑91 (MQ=255)
                                                    aaCCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACgac                                                                                           >  2:315704/1‑141 (MQ=255)
                                                     aCCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatg                                                                                          >  1:502678‑M2/1‑89 (MQ=255)
                                                        tggtggTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCCTGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcacagcaca                                                                                       <  2:190515‑M2/143‑58 (MQ=255)
                                                        tggtggTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgcca                                                                                       >  1:312524‑M2/1‑86 (MQ=255)
                                                             gtTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgg                                                                                  <  2:146998‑M2/143‑63 (MQ=255)
                                                             gtTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgg                                                                                  <  1:19540‑M2/143‑63 (MQ=255)
                                                             gtTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGATGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTg                                                                                  <  1:212354/143‑1 (MQ=255)
                                                               tACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggt                                                                                >  1:427227‑M2/1‑79 (MQ=255)
                                                                aCAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGCGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaattgccagccgggtc                                                                               <  2:610013‑M2/143‑66 (MQ=255)
                                                                 cAACCTGATGGTGGCGGCGATGGATACCGGTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtcc                                                                              >  2:238203‑M2/1‑77 (MQ=255)
                                                                    ccTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatg                                                                           <  1:298318‑M2/143‑70 (MQ=255)
                                                                     cgcattgCCGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatga                                                                          >  1:350155‑M2/4‑73 (MQ=255)
                                                                      tGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCAGTTTGCCTGCAAAGAGGGAGCAGATCGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTgcaccgcacc                                                                         >  1:658602/1‑143 (MQ=255)
                                                                           gtgGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggtt                                                                    >  2:438532‑M2/1‑67 (MQ=255)
                                                                           gtgGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccat                                                                            >  1:278952‑M2/1‑67 (MQ=255)
                                                                           gtgGCGCCGGTCGATACCGCTGATTAGCCATGTACCGTCGGCTTCCCGTGTGCCTTCAAAGCGGGAGaatcacgtctgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggtt                                                                    >  2:164408‑M2/1‑67 (MQ=255)
                                                                            tgGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGcc                                                                   >  2:113527/1‑143 (MQ=255)
                                                                             ggcggcGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGTGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagccctgcaaatgccagacgggtccatgactggtttt                                                                  >  1:217764‑M2/1‑65 (MQ=255)
                                                                               cggcgATGGATACCGCGGATTATCCATGTACCGTCGGCGTCCCGTATGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccggaatctgcaacttttagcccgtcaaatgccagacgggtccattactggtttttt                                                                >  2:48592‑M2/1‑63 (MQ=255)
                                                                                tgccaTGGATGCCGCTGATGATCCATGTAACGTCGGCTGCCCGTTAGCCTTCAAAGAGGGAGaattacgtccgcaatcaaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttg                                                               >  2:66448‑M2/2‑62 (MQ=255)
                                                                                 gcgATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttga                                                              >  2:447495‑M2/1‑61 (MQ=255)
                                                                                 gcgATGGATACCGCTGAGTATCCAGGTACCGTCGGCTGCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttga                                                              >  2:144624‑M2/1‑61 (MQ=255)
                                                                                   tgcggatcCCGCTGACTATCCATGTCCCGGCGGCTGCCTGTTTGCNTTCAAAGAGGGAGaattacgtccgtactcnaacgaaccgtcatctgcanatttcancccggcnaatgccagacgggtccatgactggttttttgaag                                                            >  2:391139‑M2/4‑59 (MQ=255)
                                                                                   gATGGTTACCGCTGATTATCCATGTACCTGCGGGTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgaccggttttttgaag                                                            >  2:252070‑M2/1‑59 (MQ=255)
                                                                                   gATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcgaatgccagacgggtccatgactggttttttgaag                                                            <  1:160577‑M2/143‑85 (MQ=255)
                                                                                   gATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACAGCACCGCCGCAAACGGTa                                                            >  2:273431/1‑143 (MQ=255)
                                                                                    gtGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAACGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTaa                                                           <  2:28113/142‑1 (MQ=255)
                                                                                     tcgctaccgCTGACTCTCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatatgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagat                                                          >  1:249954‑M2/5‑57 (MQ=255)
                                                                                        aTACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggccaatgccagacgggtccatgactggttttttcaagcttaa                                                       <  2:209119‑M2/143‑90 (MQ=255)
                                                                                            cGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTGAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtga                                                   <  1:417500‑M2/143‑94 (MQ=255)
                                                                                            cGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgt                                                   >  1:305127‑M2/1‑50 (MQ=255)
                                                                                            cGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagt                                                     >  1:512632‑M2/1‑50 (MQ=255)
                                                                                            cGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTa                                                   >  2:227771/1‑143 (MQ=255)
                                                                                             gCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttggagattcagtgtt                                                  >  1:463122‑M2/1‑49 (MQ=255)
                                                                                                  ttATCCACGTCCCGTCGGCTTCCCGTTTGCCTTCAAAGAGGTAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatgtcagctcggcaaatgccagtcgggtccatgactggttttttgaagattcagtgttgtttg                                             >  2:593269‑M2/1‑44 (MQ=255)
                                                                                                   tATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtcatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgc                                            >  1:415028‑M2/1‑43 (MQ=255)
                                                                                                   tATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattaagtgttgtttgc                                            <  2:343776‑M2/143‑101 (MQ=255)
                                                                                                          gTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagactcagtgttgtttgcctgaata                                     <  1:641103‑M2/143‑108 (MQ=255)
                                                                                                            aCCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatatt                                   >  1:258824‑M2/1‑34 (MQ=255)
                                                                                                            aCCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaagttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatatt                                   >  1:635282‑M2/1‑34 (MQ=255)
                                                                                                             ccGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattg                                  >  2:74384‑M2/1‑33 (MQ=255)
                                                                                                              cGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgt                                 <  1:430587‑M2/143‑112 (MQ=255)
                                                                                                                 cGGCTTCCCGTTTGCCTTCAAAGCGGGAGaattacctccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtatt                              >  1:366807‑M2/1‑29 (MQ=255)
                                                                                                                 cGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtatt                              >  2:129133‑M2/1‑29 (MQ=255)
                                                                                                                   gCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtatttc                            <  2:623781‑M2/143‑117 (MQ=255)
                                                                                                                    cTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtactctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatcttgtattccc                           <  1:129402‑M2/143‑118 (MQ=255)
                                                                                                                     ttCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgtcagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattccca                          <  2:364728‑M2/143‑119 (MQ=255)
                                                                                                                     ttCCAGATTGCCATCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaactttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcatgaatgtcatattccca                          <  2:473579‑M2/143‑119 (MQ=255)
                                                                                                                         cGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgacagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattga                      >  2:375417‑M2/1‑21 (MQ=255)
                                                                                                                         cGTTTGCCTTCAAAGAGGGAGAATTGCAACGATATTACGAAGGCTGGGAAAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAAACGTATTAAACTGCGTTTCGCCACGCTGCTGGCActg                      >  2:58697/1‑141 (MQ=255)
                                                                                                                           tttGCCTTCAAAGAGGGAGaattacgtcagtaatcgaaagaaccgtaatctgcaaatttcagcctggcaaatgccagacgggtccatgactggttttttgaagcttcagtgttgtttgcctgaatattgtattcccattgacg                    <  1:519657‑M2/143‑125 (MQ=255)
                                                                                                                             tGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTaaaa                  >  1:178726/1‑143 (MQ=255)
                                                                                                                             tGCCGTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaataatccaactgcaggtgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgt                  >  1:482147‑M2/1‑17 (MQ=255)
                                                                                                                                cTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagc               <  2:102992‑M2/143‑130 (MQ=255)
                                                                                                                                cTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTCAAAAAt               >  1:620793/1‑143 (MQ=255)
                                                                                                                                 ttCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagcc              <  1:395843‑M2/143‑131 (MQ=255)
                                                                                                                                 ttCAAAGACGGAGaactacgtccgtaatcgaaggaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagcc              >  2:450875‑M2/1‑13 (MQ=255)
                                                                                                                                  tCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagcca             <  1:165875‑M2/143‑132 (MQ=255)
                                                                                                                                          ggAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccatttaccgtagccagtgagttg     <  1:399682‑M2/143‑140 (MQ=255)
                                                                                                                                            agaattacgtctgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgcctggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagccagtgagttgat   <  1:105766‑M2/143‑142 (MQ=255)
                                                                                                                                            agaCTTACGTCGATACTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGACCCGGTAAGc   <  1:610205/143‑1 (MQ=255)
                                                                                                                                             gaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtcgccagtgagtggatc  <  1:567029‑M2/143‑143 (MQ=255)
                                                                                                                                             gaactacctccgtaattttaagaaccggaatctgcaactttcagcccggcaaatgccagacgggtccatgcctggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagccagtgagttgatc  >  2:528410‑M2/1‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
CTTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGACCCGGTAAGCA  >  NC_000913/1501883‑1502166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.