| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3060164 | 23 (0.640) | 5 (0.140) | 5/272 | 3.8 | 18.5% | coding (412/894 nt) | argP | DNA‑binding transcriptional dual regulator ArgP |
| ? | NC_000913 | = 3060177 | 22 (0.640) | coding (425/894 nt) | argP | DNA‑binding transcriptional dual regulator ArgP | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCAACGCCGACAGTCTGGCGACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCTAACGGCGTAACGCGTTCGGCATTACTGAAA > NC_000913/3060041‑3060316 | gTCAACGCCGACAGTCTGGCGACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCAATCAGGAACGTCTGCGCCGCGGCGAAGTTGACGgcactgt > 2:121996/1‑138 (MQ=255) cTGGCGACGTGGTTGCTTCCTGCACTGGCTCCTGGGTTGGCTGATTCGCCTATCGGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCa < 1:109018/143‑1 (MQ=255) tGGCGACGTGGTTGCTTCCTGCAGTGGCTCCTGTGTTGCCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAg < 1:424767/143‑1 (MQ=255) gACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGCAGGGGTCGGCGCGGTGAGTATTCAACAGCAGgcgc > 1:491039/1‑143 (MQ=255) gACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGATGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTAAGGAACGTCTGCGCCGCGGCCAAGTGGCCGGGCAGGTGAGTATTCAACATCCGgcgc > 2:370100/1‑143 (MQ=255) tGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTCTTGAACATCAGGCGCTGcc > 2:562418/1‑143 (MQ=255) ccTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGctgtct > 1:641945/1‑143 (MQ=255) gCACTGGCTCCTGTGTTGGCTGATTCTCCTATTCGTCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGttgtcttgt < 1:317513/143‑1 (MQ=255) gCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGttgtcttgt > 1:465603/1‑143 (MQ=255) tCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAAc > 1:205150/1‑143 (MQ=255) tgtTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGt < 1:302474/143‑1 (MQ=255) tGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTGGTCTTGACGATAAACTTGGTGCGCTCg > 2:614600/1‑143 (MQ=255) ggATCCGCCTAGCCGCCACAACTTTCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCTGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCg < 1:577406/142‑1 (MQ=255) gATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGa < 1:527870/143‑1 (MQ=255) gATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGAGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAACCTTGGTGCGCTCGa > 1:141105/1‑143 (MQ=255) ttCGCCTCTCCGCCTCATCTTGCAGGTAGAAGATGAAGCCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACt < 2:47616/143‑1 (MQ=255) tCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTc > 1:12197/1‑143 (MQ=255) gCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACAGCAGGCGCTGCCGCGTTGTCTTGTCGCTAAACTTAGCGCGCTCGCCTATCTGCTCTTc > 2:34170/1‑143 (MQ=255) tGCATGTAGAAGATGAAACCCTCACTCGGGAACGTATGCGCCGCGGCGAGGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGGTGCCGAGTTGCCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCaaaa < 2:207967/143‑1 (MQ=255) tcccgaGGAACGTCTGCGCCGCGGCGAGGGGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTcc < 2:422744/138‑1 (MQ=255) cTCGGGAACGTCTGCGCCGGGGCGGAGTGGGCGGCGCGGTGAGTATTCAACAGCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCt < 2:641945/143‑1 (MQ=255) cagcgcCGCGGCGAAGTGGGCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCTAACGGCGTAAc < 2:69357/141‑1 (MQ=255) tCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCTAACGGCGTCACGCGTTCGCCATTACTGaaa > 2:199758/1‑143 (MQ=255) | GTCAACGCCGACAGTCTGGCGACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCTAACGGCGTAACGCGTTCGGCATTACTGAAA > NC_000913/3060041‑3060316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |