New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1460521	53 (1.130)	4 (0.090)	4/250	NT	7.3%	coding (51/423 nt)	paaI	phenylacetyl‑CoA thioesterase
	?	NC_000913	= 1460536	52 (1.180)					coding (66/423 nt)	paaI	phenylacetyl‑CoA thioesterase

ATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1460374‑1460521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgccAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCATGGGCATTTTGCCAGGCCTTATGACTCATAACCGCTCTCCAGAAGCGCCCGTTGGCGCAGCAATGAACATGGGCGATAGCGTTCTTCGCCATAGTGATGCTGTA  <  NC_000913/1460536‑1460396                                                                                                                                                                                                                                                                                                   agagttAGGCTCCGTGAAGCTGTACTGCATCACTATGGCGAAGGACGCTATCGCCCGTGTTCATTGCTGCGCCAACGGTCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACG                                                                                                                                                    <  2:338371/137‑1   ATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGAT                                                                                                                                                  <  2:416036/143‑1      AAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCC                                                                                                                                               <  1:454765/143‑1                            cacgaaaATGGCGAAGAACGCTCTCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCAAGCGCTTTGGCGCAGGCATCG                                                                                                                         <  2:883956/136‑1                              TCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCAAGCGCTTTGGCGCAGGCATCGTT                                                                                                                       <  1:318217/143‑1                                                                                                       TCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCAT                                                                                                         >  1:170427/1‑84                                                                                                       TCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCAT                                                                                                         <  2:170427/84‑1                                                                                                                                                ATGCCAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCATGGGCATTTTGCCAGGCCTTATGACTCATAACCGCTCTCCAGAAGCGCCCGTTGGCGCAGCAATGAACATGGGCGATAGCGTTCTTCGCCATAGTGATGCT     >  1:14633/1‑143                                                                                                                                                  GCCAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCATGGGCATTTTGCCAGGCCTTATGACTCATAACCGCTCTCCAGAAGCGCCCGTTGGCGCAGCAATGAACATGGGCGATAGCGTTCTTCGCCATAGTGATGCTGT   <  1:543604/143‑1                                                                                                                                                   CCAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCATGGGCATTTTGCCAGGCCTTATGACTCATAACCGCTCTCCAGAAGCGCCCGTTGGCGCAGCAATGAACATGGGCGATAGCGTTCTTCGCCATAGTGATGCTGTA  <  2:638770/143‑1                                                                                                                                                                                                                                                                                                   ATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1460374‑1460521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgccAAGCGCTTTGGCGCAGGCATCGTTCTCATACATTGCATGGGCATTTTGCCAGGCCTTATGACTCATAACCGCTCTCCAGAAGCGCCCGTTGGCGCAGCAATGAACATGGGCGATAGCGTTCTTCGCCATAGTGATGCTGTA  <  NC_000913/1460536‑1460396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.