New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	983123 =	36 (0.770)	3 (0.070)	3/252	NT	8.5%	coding (49/549 nt)	ycbK	DUF882 domain‑containing protein YcbK
	?	NC_000913	983167 =	30 (0.670)					coding (93/549 nt)	ycbK	DUF882 domain‑containing protein YcbK

TCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGTTTTTCGATGGCAGAGGCTATATTCAGGA  >  NC_000913/982982‑983265                                                                                                                                              |                                                                                                                                               tCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGt                                                                                                                                               <  1:724869/143‑1 (MQ=255) tCACCTTGACGTCTGCTGTAGGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGt                                                                                                                                               <  2:780809/143‑1 (MQ=255)  cgcggtaatcgcggaaaaaatggttaagttttgccaattcttcctgaatatagcctctgccatcgaaaaactccgctttgattgactctccggtatgaagattattgagtgtcaaaatgcgcgggcgtggggtagagagtGtt                                                                                                                                              >  1:713185‑M1/141‑143 (MQ=255)  cctCTTGACGTCTGGTTTACGGGCGGTTGAGGTGCAAGTTCTGCGCCTGGAGTGCATATAAACGATAACATGGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGtt                                                                                                                                              <  2:646683/141‑1 (MQ=255)  cctCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCCCGTGCGCCAGTAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGtt                                                                                                                                              <  2:890073/141‑1 (MQ=255)   gcggtaatcgcggaaaaaatggttaagttttgccaattcttcctgaatatagcctctgccatcgaaaaactccgctttgattgactctccggtatgaagattattgagtgtcaaaatgcgcgggcgtggggtagagagtGTTg                                                                                                                                             >  1:722456‑M1/140‑143 (MQ=255)    tCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGc                                                                                                                                            >  1:95691/1‑143 (MQ=255)    cggtaatcgcggagcaaatggttgagtgtggccaattcttcctgaatatagcctctgccatcgaaaacctccgctttgattgactctccggtatgaagtgtattgagtgtcaaaatgcgcgggcgtggggtagagagtGTTGc                                                                                                                                            >  2:501228‑M1/139‑143 (MQ=255)            tCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTg                                                                                                                                    >  2:460154/1‑143 (MQ=255)                    aCGTGCGGTTAAGGTGCCTCTTGTGTGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATc                                                                                                                            <  1:172575/143‑1 (MQ=255)                    aCGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATc                                                                                                                            <  1:147513/143‑1 (MQ=255)                        gCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGCTGCACCCGGTGCCGCCATCCTGc                                                                                                                        >  2:868993/1‑143 (MQ=255)                              aaGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACCTTGAACTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGAccc                                                                                                                  >  1:195433/1‑143 (MQ=255)                                ggTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGGCAGCCTGCCGACACCt                                                                                                                >  1:336023/1‑143 (MQ=255)                                 gTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTg                                                                                                               >  2:332185/1‑143 (MQ=255)                                   gCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCg                                                                                                             >  1:742968/1‑143 (MQ=255)                                     ctctTGTGCGCCAGAAGTGCATATAAACGAATGTATGTTTCGGGAGACTTGATTATCATGGACAAATTCGACACTAAACCCCCCAAAGGGGTGGCTCATGGGGTCTTCCCACACGTGACCGCCATCCTACCGACACATGCGtg                                                                                                           >  2:17623/1‑142 (MQ=255)                                         tgtgCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCa                                                                                                       >  1:190275/1‑143 (MQ=255)                                            ccggaatatagcctctgccatcgaaaaactccgctttgattgactctccggtatgaagattattgagtgtcaaaatgcgcgggcgtggggtagagagtGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAaca                                                                                                    >  1:16409‑M1/99‑143 (MQ=255)                                             ctgcatatagccgctgccatcgagaagctccgctttgattgtctctccggtatgaagattattgagtgtcaaaatgcgcgggcgtggggtagagagtGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAacac                                                                                                   >  1:374659‑M1/98‑143 (MQ=255)                                              gcCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCACCAct                                                                                                  >  1:253208/1‑143 (MQ=255)                                                    cgTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGTCGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTAc                                                                                            <  2:369468/142‑1 (MQ=255)                                                      tGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGGAACACTCTCTAccc                                                                                          >  1:868331/1‑143 (MQ=255)                                                          tataAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTGCGTGGCGGTGCACTCGGTGCCGCCATCCTGCCGACCCCTCCGATTGCAACACTCTCTACCCCACg                                                                                      >  2:737880/1‑143 (MQ=255)                                                              aaCGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTCGCGGTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTCGCCACACTCTCTCCCCCACccccc                                                                                  >  2:228160/1‑142 (MQ=255)                                                               aCGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCcgc                                                                                 >  2:15942/1‑143 (MQ=255)                                                                  gaaaaactccgctttgattgactctccggtatgaagattattgagtgtcaaaatgcgcgggcgtggtgtagagagtGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCa                                                                              >  1:752011‑M1/77‑143 (MQ=255)                                                                         cgACCCGAAGACTCGATTATCAGGGACAAATTCGACGCTAATCGCCGCAACTTCCTGGCGCTTGTAGGCGTGGCACGCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCCCTACCCCACGCCCGCGCATTTTGac                                                                       <  2:497849/142‑1 (MQ=255)                                                                                 aGACTGGAACATCAAGGACAAACACGACGCCAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGCTCCCGCCATCCTGCCGACCCCTGCGTTTGCAACCCTCTCTACCCCACGCCCGCGCATTTTGACACTCaata                                                               <  1:185737/143‑1 (MQ=255)                                                                                    cTTGATTATCATGGACAAATTCGACGCTAATCGACGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCACCCCGCTCCACCCCACCCCCCCGCATCTTGACACCCaatcacc                                                            >  2:853566/1‑139 (MQ=255)                                                                                       gATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTc                                                         <  1:243287/143‑1 (MQ=255)                                                                                       gATTATCACGGACATATTCGACGCTAATCGCCGCAAAGTGCTGGCGCCTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTc                                                         <  1:362053/143‑1 (MQ=255)                                                                                            tCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATCTTGACACTCAATACTCTTCATAcc                                                    >  2:378871/1‑143 (MQ=255)                                                                                                 gACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGgaga                                               <  2:95691/143‑1 (MQ=255)                                                                                                  aCAAATTCGACGTTAACCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGagag                                              <  1:774232/143‑1 (MQ=255)                                                                                                  aCAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGagag                                              >  2:528525/1‑143 (MQ=255)                                                                                                     aaTTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCACCACTCTCTACCCCACGCCCGCGCATCTCCACACTCGTTGATCTTCACACCGGAGAGtca                                           >  1:380845/1‑143 (MQ=255)                                                                                                     aaTTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGCGtca                                           >  1:605770/1‑143 (MQ=255)                                                                                                         cGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGtcaatca                                       >  1:880517/1‑143 (MQ=255)                                                                                                          gACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGtcaatcaa                                      <  1:415082/143‑1 (MQ=255)                                                                                                              cTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCACCCTGCCGACCCCTGCGTTCGCAACACTCTCTACCCCACGCCCGCCCATTTTGACGCACAATAATCTTCATACCGAGGAGTACATCAAAgag                                  >  2:169889/1‑141 (MQ=255)                                                                                                                      cgcACATTGCTGGCGCGTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGCCCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGttttt                          <  2:72979/143‑1 (MQ=255)                                                                                                                      cgcAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGttttt                          <  1:15942/143‑1 (MQ=255)                                                                                                                      cgcAAATTGCTGGCGCTTGGTGGCGTGGCACTCGGTGCCGCCATCCTGCCGAGCCCTGCGTTGGCTACACTCTCTACCCCACGCCCGCGCATTTTGACACGCAAGAATCTCCACACCGGAGAGCCAACCAAAGCGGAgagctt                          >  2:174149/1‑138 (MQ=255)                                                                                                                                  gcgcTTTGTCGCGTTGCACTCTGTGTCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTTAATCAAAGTGGAGTTTTTCGATGGCAGAgg              <  2:862378/143‑1 (MQ=255)                                                                                                                                  gcgcTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGCCCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGTTTTTCGATGGCAGAgg              <  1:413724/143‑1 (MQ=255)                                                                                                                                    gcTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCACACGCCCGCGCATTTTGACACTCAATAATCTTCCTACCGGAGAGTCAATCAAAGCGGAGACTTTCGATGGCAGAGGcc            >  2:361321/1‑142 (MQ=255)                                                                                                                                              GTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGCTTTCCGATGGCAGAGGCTATATTCAGga  <  1:523035‑M1/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               TCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGTTTTTCGATGGCAGAGGCTATATTCAGGA  >  NC_000913/982982‑983265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.