| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,439,589 | G→C | 7.5% | intergenic (‑80/+27) | yhdN ← / ← rplQ | conserved protein YhdN/50S ribosomal subunit protein L17 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,439,589 | 0 | G | C | 7.5% | 182.4 / 8.0 | 68 | intergenic (‑80/+27) | yhdN/rplQ | conserved protein YhdN/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (36/25); new base C (3/2); total (39/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.34e-01 | |||||||||||
AACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCG > NC_000913/3439448‑3439727 | aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCggg > 2:814839/1‑143 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCg > 1:701767/1‑143 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCAACTGGTCAAGTAACCACATAAATAATCCAGGGGATGAACAAAAAGAGTACAGCAATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCgg < 2:430068/143‑1 (MQ=255) cTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGtt > 1:414319/1‑143 (MQ=255) tttCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGCCGGGttc > 2:88671/1‑142 (MQ=255) tttCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACACGCAGGGGCGGGgtt > 2:346208/1‑143 (MQ=255) tttCGCTTGCGCTGCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCCCGGCGGGttt < 2:338599/143‑1 (MQ=255) tCGCTTGCGCTTCTGCTATATGGCGCTCGGCCCACTGGTCAAGTAACCACATAAATGCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGttttt < 2:897594/143‑1 (MQ=255) ttGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTGTTTTAAc > 2:304710/1‑143 (MQ=255) tGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACg < 1:152621/143‑1 (MQ=255) gcgcTCCGGCTATATGGCGCTCTGCCGACTGTGAAAGTAACCACATAATGACCGCAGGCGATGAACAAAAAGAGGACACCTATTGTAGATAAGTGGGGATACTACGGGTATAAAACAACCCGCCGGGGCGGGTTTTTTTACGt < 2:838706/143‑1 (MQ=255) ttCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCt > 1:631702/1‑143 (MQ=255) tCTGCTATATGGGGCTCGGCGCGCTTGTGAAGTAACCACAGAAATACTCCAGGGGAGGAACAAAAAGAGTACAGCTATGGTAGATGGGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCtt < 2:292822/143‑1 (MQ=255) tGCTATATGGCGCGCTGCCCACTGGTCAAGTAACCACATAAATGCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCa < 2:662190/143‑1 (MQ=255) tatGGCGCTCTGCCCACTGGCCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTa < 1:420256/143‑1 (MQ=255) tatGGCGCACTGCCCAATGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGCACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTa < 1:460589/143‑1 (MQ=255) atGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAc < 1:815750/143‑1 (MQ=255) gcgcTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActct > 1:266023/1‑143 (MQ=255) gcTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGAGGGTTGTTTTACGTTGCTTCAGATTACTCTgc > 2:517142/1‑143 (MQ=255) tctGCCCACCGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcag < 1:457412/143‑1 (MQ=255) gcgcACTGGTCAAGGAACCACATAAATGCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGcagcag < 2:437065/140‑1 (MQ=255) gCCCACTGGTCAAGCAACCACATAGATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAATTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGcagcag < 1:206934/143‑1 (MQ=255) tGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGACGGGGCGGGGTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTg > 1:438034/1‑143 (MQ=255) aGTAACCACATAAATCCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtct < 1:836075/143‑1 (MQ=255) gTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGCCGGGTTTTTTTACGTTGCTTCACATTACTCTGCAGCCGCTTCTGCTTtctc > 2:918702/1‑143 (MQ=255) tAACCACATCAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct < 1:697867/143‑1 (MQ=255) tAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCATCAGCTTCTGCTTTctct > 1:93480/1‑143 (MQ=255) aCCACAAATATCCCCCAGGGAATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATGCTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGa < 1:304710/143‑1 (MQ=255) cacaTAGATACTCCAGGGGATGAACCAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc < 2:228043/143‑1 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc > 1:90952/1‑143 (MQ=255) acaTGAATACGACAGGGGAGGAACAACAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg < 2:677055/143‑1 (MQ=255) gaTAAAGACTCCAGGGGATGGACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAACCACCCGCCGTGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGa < 2:108587/142‑1 (MQ=255) caTAAAGTCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGa < 2:782943/143‑1 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGCTACTACGGGTATAAAAAAACCTGCCGGGGCGGGTTTTTTTACGTTGCTTCAGGTTACTCTGCCGCCGGTGTTGCTTTCTCTGAACGATCAACCAgg > 1:174887/1‑142 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGGAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGGTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTGTGCCGTCTCTGAACGATGCACCacg > 2:819454/1‑141 (MQ=255) ttaaCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 1:562463/141‑1 (MQ=255) tGAACAAAAATCGTACAGCTAGGGTACATAAGTGGGGATACTACGGGTATAAAATAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 1:337286/143‑1 (MQ=255) tGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 2:179768/143‑1 (MQ=255) caaCAATAAGAGTACAGCTATTGTAGCTAAGTGGGGATACGACGGGTATAAAAACACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg < 2:247129/142‑1 (MQ=255) aaCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCCGCTTCGGCTTTCTCTGCACGATCAACCAGCTCGACGTaacc > 2:192630/1‑141 (MQ=255) aaCAAAAAGAGTACAGCTATTGTAGATAAGCGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGCTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCGTTCTCTGAACGATCAACCAGCTGGATGTAGGc > 1:580138/1‑143 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGcc > 1:383393/1‑143 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAt > 1:585934/1‑143 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGCTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGCACGATCCACCAACTCGATGCAAGCCATc > 2:845793/1‑143 (MQ=255) agagTACAGGTATTGTAGATAAGGGGGGATACTACGGGTATAAAAAATCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc < 1:380067/143‑1 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGgtgt > 2:231759/1‑143 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGt > 1:645421/1‑143 (MQ=255) cTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCAGCAAAAGCTTCTGCTTTCTCTGAACGATCAACCAGCTAGATGTAAGCCATAGGCGGGTTGTCg > 2:105966/1‑143 (MQ=255) ttGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCt > 1:904008/1‑143 (MQ=255) gATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGcgcg > 2:725441/1‑143 (MQ=255) gATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTATTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCAGCGCAGTGTCGCCTGCACg > 1:293850/1‑143 (MQ=255) tAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTGTTTACGTTGCTTCAGATTACTCTGCAGCAGCGTCTGCTTTCTGTGAACGATCAACCAGCTCGATGTAAGCCATTGGCGCGTGGTCGCCGGCACGGa > 1:606497/1‑143 (MQ=255) aGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGCTGTAAGCCATCGGCGCGTTGTCGCCTGCAccgcac > 2:782524/1‑138 (MQ=255) tGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcc > 2:162250/1‑143 (MQ=255) gggATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTACGCCATCGGCGCGTTGTCGCCTGCACGGAAGCcac > 2:542631/1‑143 (MQ=255) ggATACTACGGGTATAAAAAAAACCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTCAACGATCAACCACCTCGATGTAAGCCATCGGCGCGTTGCCCCCCGCACGGAAGCcaca > 2:643713/1‑143 (MQ=255) cGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 2:88177/143‑1 (MQ=255) gggTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACATTGCTTCAGATTACTCTGCAGCAGCTTCTGCGTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAGCGGCGCGTTGTCGCCTGCAAGACAGCCAGACTTAAGAAt > 1:595363/1‑143 (MQ=255) caacgtaAAAAAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTGCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGACGCCCCACTTCAGAAt > 2:143180/6‑143 (MQ=38) gtaAAAAAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGa < 1:514669/142‑1 (MQ=255) ataAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGCAGCCACACTTCAGAATACGa > 1:809439/1‑143 (MQ=255) aaaaaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt < 2:585934/143‑1 (MQ=255) aaaaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGCTCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGCAGCCACACTTCAGAATACGAgt > 1:482301/1‑143 (MQ=255) aaaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACAGAAGCAACACCACAGAATCAGAgtg > 2:15977/1‑143 (MQ=255) aaaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgtgt > 1:269587/1‑143 (MQ=255) cctccgTGGCGTGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCCTCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac < 1:174582/140‑1 (MQ=255) cgccgGGGCGGGATTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTACTCTGCACGATCCACCAGCTCGCTGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAACCGACACTTCAGAATACGCGTGTAacgacc > 1:111537/1‑143 (MQ=255) gccgGGGCGGGTTTTTTTACGTTGCTTAAGCTTAGTCGGCAGCAGCTTCTGCTTTATCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGCGTAACCACCg > 2:505667/1‑143 (MQ=255) gccgGGGCGGGGTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCAACACTTCAGAATACGAGCGTAACCACCg > 1:245093/1‑143 (MQ=255) | AACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCG > NC_000913/3439448‑3439727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |