BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	569149 =	13448 (53.610)	648 (2.930)	67/164	3.8	5.1%	coding (248/1527 nt)	ybcK	DLP12 prophage; putative recombinase
*	?	NC_000913	569173 =	12238 (55.330)	648 (2.930)	67/164	3.8	5.1%	coding (272/1527 nt)	ybcK	DLP12 prophage; putative recombinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 14048 total aligned reads displayed.

TAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGA  >  NC_000913/569050‑569248

 aaGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGtt                                                                                                    <  1:4176970/100‑1 (MQ=255)

   gTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGa                                                                                                  <  1:3957229/100‑1 (MQ=255)

   gTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGa                                                                                                  <  1:3755703/100‑1 (MQ=255)

   gTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGa                                                                                                  >  1:3546811/1‑100 (MQ=255)

       aTTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGt                                                                                              >  1:6026973/1‑100 (MQ=255)

        ttCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTc                                                                                             >  1:3014086/1‑100 (MQ=255)

          cAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTg                                                                                           <  1:2497832/100‑1 (MQ=255)

          cAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTg                                                                                           >  1:2195369/1‑100 (MQ=255)

           aaaGGAATGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTgg                                                                                          >  1:4069124/1‑100 (MQ=255)

             aGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTg                                                                                                   <  2:1887020/89‑1 (MQ=255)

              ggAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACGTTGTTAGTTGAAAGTCTGGACa                                                                                       >  1:3111241/1‑100 (MQ=255)

              ggAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGa                                                                                                  <  2:866825/89‑1 (MQ=255)

                aaaGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGaaa                                                                                                <  2:1086682/89‑1 (MQ=255)

                aaaGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGaaa                                                                                                >  2:5496910/1‑89 (MQ=255)

                 aaGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGAc                                                                                    <  1:6130537/100‑1 (MQ=255)

                 aaGCATGCACAATCAGGAGCTTTTTCGGAATTTTTACATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAg                                                                                               <  2:725347/89‑1 (MQ=255)

                  aGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACt                                                                                   <  1:590789/100‑1 (MQ=255)

                   gCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACtt                                                                                  >  1:1524873/1‑100 (MQ=255)

                    cATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACttt                                                                                 <  1:3851503/100‑1 (MQ=255)

                       gCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGa                                                                                         <  2:5272978/89‑1 (MQ=255)

                       gCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCaa                                                                              <  1:653924/100‑1 (MQ=255)

                        cacaATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAc                                                                                        <  2:5394918/89‑1 (MQ=255)

                        cacaATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAag                                                                             <  1:4491886/100‑1 (MQ=255)

                        cacaATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTATTAGTTGAAAGTCTGGACAGACTTTCAag                                                                             <  1:6238689/100‑1 (MQ=255)

                         acaATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAaga                                                                            <  1:2903324/100‑1 (MQ=255)

                             tCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGaaa                                                                        <  1:5061272/100‑1 (MQ=255)

                                ggAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAg                                                                     >  1:3446667/1‑100 (MQ=255)

                                   gCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAag                                                                             >  2:13444/1‑89 (MQ=255)

                                    cTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAaga                                                                            <  2:2535357/89‑1 (MQ=255)

                                    cTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCgg                                                                 <  1:6319925/100‑1 (MQ=255)

                                    cTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCgg                                                                 <  1:2064963/100‑1 (MQ=255)

                                     tttttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAagag                                                                           >  2:5015741/1‑89 (MQ=255)

                                     tttttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGt                                                                <  1:2600092/100‑1 (MQ=255)

                                      ttttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACGGACTTTCAAgaga                                                                          >  2:3874435/1‑89 (MQ=255)

                                      ttttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTg                                                               >  1:1215250/1‑100 (MQ=255)

                                      ttttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTg                                                               >  1:1627950/1‑100 (MQ=255)

                                       tttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGa                                                              <  1:3344201/100‑1 (MQ=255)

                                        ttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGaaa                                                                        <  2:2388273/89‑1 (MQ=255)

                                         tCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAg                                                            >  1:964175/1‑100 (MQ=255)

                                          cGGAATTTTTAGATGCAATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGaaaaa                                                                      >  2:3994016/1‑89 (MQ=255)

                                           ggAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCg                                                          >  1:1000300/1‑100 (MQ=255)

                                              aTTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGAtt                                                       >  1:111261/1‑100 (MQ=255)

                                               tttttAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTg                                                      <  1:5583361/100‑1 (MQ=255)

                                               tttttAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTg                                                      >  1:132135/1‑100 (MQ=255)

                                                 tttAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTg                                                               <  2:4765193/89‑1 (MQ=255)

                                                 tttAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGaa                                                    >  1:5691761/1‑100 (MQ=255)

                                                 tttAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGaa                                                    >  1:484104/1‑100 (MQ=255)

                                                    aGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAg                                                            <  2:3413534/89‑1 (MQ=255)

                                                     naTGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTc                                                >  1:5380045/2‑100 (MQ=255)

                                                     gATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGc                                                           <  2:5618213/89‑1 (MQ=255)

                                                     gATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGc                                                           <  2:1991929/89‑1 (MQ=255)

                                                      aTGCTATAGTGCATGATTATATATTGACAGTAACTACATTGTTAGTTGAAAGTCTGGACAGACTTACAACAGAAAAAGTCGGTGAAGCg                                                          <  2:3156390/89‑1 (MQ=255)

                                                      aTGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCt                                               <  1:195688/100‑1 (MQ=255)

                                                       tGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTg                                              <  1:754663/100‑1 (MQ=255)

                                                        gCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGa                                             >  1:3221992/1‑100 (MQ=255)

                                                         cTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGAtt                                                       >  2:2657047/1‑89 (MQ=255)

                                                            taGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAAtt                                         >  1:3646836/1‑100 (MQ=255)

                                                             agagCATGGTTATATATTGCCAAGAACTTCAGTGTTAGTTGAAAGTATGGTCATGCTTTTGAGTGATAATGCCGTTGACGCGTTTgcgc                                                   >  2:1487891/1‑86 (MQ=255)

                                                              gagCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACg                                                  >  2:1215925/1‑89 (MQ=255)

                                                              gagCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACg                                                  <  2:2795831/89‑1 (MQ=255)

                                                              gagCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACg                                                  <  2:2911361/89‑1 (MQ=255)

                                                              gagCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGa                                       >  1:4273824/1‑100 (MQ=255)

                                                                 cATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCt                                               >  2:5729299/1‑89 (MQ=255)

                                                                  aTGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTg                                              <  2:3634184/89‑1 (MQ=255)

                                                                  aTGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGAtttt                                   <  1:495394/100‑1 (MQ=255)

                                                                    ggTTATATATTGCCAGGGACTTCAATGTTCGTTGAAAGTCTGGACAGACTCTCAAGAGAAAATGTCGGTGAAGCGAGCGAACGTCTGaa                                            >  2:5126641/1‑89 (MQ=255)

                                                                     gTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGaaa                                           >  2:2245711/1‑89 (MQ=255)

                                                                     gTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGaa                                >  1:2404621/1‑100 (MQ=255)

                                                                          atatTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACg                           <  1:1730200/100‑1 (MQ=255)

                                                                           tatTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGAtt                                     >  2:3531706/1‑89 (MQ=255)

                                                                           tatTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGAtt                                     >  2:6011318/1‑89 (MQ=255)

                                                                           tatTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATGACgg                          >  1:4387040/1‑100 (MQ=255)

                                                                           tatTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACgg                          <  1:5164268/100‑1 (MQ=255)

                                                                              tGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTg                                  <  2:4256267/89‑1 (MQ=255)

                                                                               gCCAGGAACTACATTGTTAGTTGAAAGTCTGGATAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGACATTGATTTTGa                                 >  2:6376939/1‑89 (MQ=255)

                                                                               gCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTAtt                      >  1:2703749/1‑100 (MQ=255)

                                                                               gCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTAtt                      >  1:5794553/1‑100 (MQ=255)

                                                                               gCCAGGAACTACATCGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGa                                 >  2:6130650/1‑89 (MQ=255)

                                                                                 cAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGa                    >  1:4611422/1‑100 (MQ=255)

                                                                                   ggAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATg                  <  1:4735301/100‑1 (MQ=255)

                                                                                      aCTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACgn                          <  2:4127778/89‑2 (MQ=255)

                                                                                       cTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGt                         >  2:2113111/1‑89 (MQ=255)

                                                                                       cTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTtat              >  1:2292989/1‑100 (MQ=255)

                                                                                        tACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTtata             >  1:1423322/1‑100 (MQ=255)

                                                                                         aCATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATaa            <  1:1839805/100‑1 (MQ=255)

                                                                                          cATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTAtt                      >  2:329011/1‑89 (MQ=255)

                                                                                          cATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAAc           <  1:5486475/100‑1 (MQ=255)

                                                                                           aTTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTg                     <  2:4533924/89‑1 (MQ=255)

                                                                                            ttGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGa                    <  2:5873325/89‑1 (MQ=255)

                                                                                            atGTTAGCTGAAAGGCTGTACAGACTTTCAAGACAAAAAGTCGGTGAAGCGATTGAATGTCTCAAATTGATTTTTAATCACGGTATTGa                    <  2:488832/88‑1 (MQ=255)

                                                                                             tGTTAGTTGAAAGTCGGCACAGACTTTCAAGAGAAAAAGTCGGGGGAGCGATGAAACGTCTGAAATTGATTTTGAAGCACGGAATTGAt                   >  2:1635747/1‑89 (MQ=255)

                                                                                              gTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATg                  >  2:3746132/1‑89 (MQ=255)

                                                                                              gTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATg                  <  2:4658644/89‑1 (MQ=255)

                                                                                                ctcttGAAAGTCTGTCCAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTg     >  1:868136/4‑100 (MQ=39)

                                                                                                 tcttGAAAGTCTGTCCAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTta               >  2:6257529/3‑89 (MQ=39)

                                                                                                 tcttGAAAGTCTGTCCAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTta               >  2:3039107/3‑89 (MQ=39)

                                                                                                  gTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCg   >  1:2806962/1‑100 (MQ=255)

                                                                                                  gTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCg   >  1:5270203/1‑100 (MQ=255)

                                                                                                   ttGAAAGTCTGTCCAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTtata             >  2:4397804/1‑89 (MQ=255)

                                                                                                   ttGAAAGTCTGTCCAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTtata             >  2:1762915/1‑89 (MQ=255)

TAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGA  >  NC_000913/569050‑569248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.