| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,703,334 | Δ1 bp | 6.1% | coding (53/906 nt) | era ← | 30S ribosomal subunit maturation GTPase Era |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,703,334 | 0 | T | . | 6.1% | 638.1 / 32.1 | 196 | coding (53/906 nt) | era | 30S ribosomal subunit maturation GTPase Era |
| Reads supporting (aligned to +/- strand): ref base T (99/85); new base . (6/6); total (105/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 | |||||||||||
Only 100 of 198 total aligned reads displayed.
ATGCAGGCCCGGTGTATCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAGGCCGCTG > NC_000913/2703186‑2703482 | atGCAGGCCCGGTGTATCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGtt > 1:1976296/1‑150 (MQ=255) gCAGGCCCGGTGTATCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCg < 1:1606667/150‑1 (MQ=255) cccGGTGTATCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGt > 2:2448705/1‑150 (MQ=255) gtATCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCcg‑acg < 1:1188449/150‑1 (MQ=255) tCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATg < 1:1461936/150‑1 (MQ=255) cGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCATCG‑TCGGACGTCcg‑aacgttgg < 1:2341169/150‑8 (MQ=255) cGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATgg > 2:1235347/1‑150 (MQ=255) cGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATgg > 1:2100275/1‑150 (MQ=255) gACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGc > 2:1804435/1‑150 (MQ=255) aCGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGTAAGTGATGGAGATTTTCTGCCCAAGGAGTTTGTTCAAGAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCa < 2:2183523/150‑1 (MQ=255) cGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCaa > 2:7299/1‑150 (MQ=255) tAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCATCG‑TCGGACGTCCGAACGTTGGCaaat < 2:2075516/150‑3 (MQ=255) tAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATa > 1:67858/1‑150 (MQ=255) aGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATaa > 2:1084993/1‑150 (MQ=255) gATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATaaa > 1:1531755/1‑150 (MQ=255) aTCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACg < 2:2013368/131‑1 (MQ=255) aTCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACg > 1:2013368/1‑131 (MQ=255) tCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGa > 2:947718/1‑128 (MQ=255) cGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATcc < 2:758791/150‑1 (MQ=255) gCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCg > 1:956733/1‑150 (MQ=255) gCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCg > 2:62425/1‑150 (MQ=255) gCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTAAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCg > 2:2297606/1‑150 (MQ=255) ccTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGc > 2:1272621/1‑150 (MQ=255) ccTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGc > 2:253923/1‑150 (MQ=255) ccTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGc < 1:48675/150‑1 (MQ=255) aTACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTa < 2:67858/150‑1 (MQ=255) aCGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAAc > 1:91947/1‑150 (MQ=255) cgcgCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACt > 2:950753/1‑150 (MQ=255) gcgcCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACtt > 2:157496/1‑150 (MQ=255) ccTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTa < 1:785204/150‑1 (MQ=255) ttCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATc > 1:1718117/1‑150 (MQ=255) ttCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATc < 2:493440/150‑1 (MQ=255) aGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGAt > 1:1280569/1‑150 (MQ=255) gTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATg > 2:141642/1‑150 (MQ=255) tGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTc > 1:2463609/1‑150 (MQ=255) gATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCAt > 1:809957/1‑150 (MQ=255) tCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTc > 2:785996/1‑150 (MQ=255) tCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTc < 1:2319880/150‑1 (MQ=255) tCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTc < 2:907187/150‑1 (MQ=255) ccccACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTcc < 1:1491284/150‑1 (MQ=255) ccccACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTcc < 1:1362496/150‑1 (MQ=255) cccACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCa < 1:2424978/150‑1 (MQ=255) ccACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAg > 2:2258459/1‑150 (MQ=255) ccACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAg < 1:1223398/150‑1 (MQ=255) aaTGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTcc < 1:869767/150‑1 (MQ=255) aTGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCa > 2:849466/1‑150 (MQ=255) ggTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTAAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGttt < 1:109124/150‑1 (MQ=255) gTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGtttt < 1:1624020/150‑1 (MQ=255) gTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGtttt > 1:1793331/1‑150 (MQ=255) tGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTTATTCCAGCTCCAGttttt < 2:1976296/150‑1 (MQ=255) aCGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCACAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTc < 1:1174779/150‑1 (MQ=255) cGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCa > 1:456041/1‑150 (MQ=255) gAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCaa < 1:131271/150‑1 (MQ=255) aGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAAc > 1:2058621/1‑150 (MQ=255) gTTGTCTGCGCCTTGCGGGATGTGATGTAGATTTTCTGCCCCATCAGTTTGTTCAACATTGTGGATTTGGCATCGTTGGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACg < 1:1969577/150‑1 (MQ=255) ttGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGc < 1:437627/150‑1 (MQ=255) tGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGcc < 2:2100275/150‑1 (MQ=255) tGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGcc > 2:329920/1‑150 (MQ=255) cTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGt > 2:1186448/1‑150 (MQ=255) gcgcCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTc > 2:1941445/1‑150 (MQ=255) gcCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTcgg < 2:1637665/150‑1 (MQ=255) ccTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTcggc < 1:740292/150‑1 (MQ=255) ttGCGGTAAGTGATGGAGATTTTCTGCCCTAGCTGTTTGTTCAACAATGTGGATTTGCCAACGTGCGGACGTCCG‑ACGTTGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTcggcgg < 2:2223149/150‑1 (MQ=255) ggAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGcc < 1:1869161/150‑1 (MQ=255) ggAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGcc < 2:1885905/150‑1 (MQ=255) ggAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGcc < 2:1161068/150‑1 (MQ=255) tGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGc < 2:1705178/150‑1 (MQ=255) ggAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATTCTCATTCAATCTCCAGTTTTTTCAACGTCTGTTCGGTGGCATCCTGGTCAggg < 2:483584/150‑3 (MQ=255) ggAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCATcc > 1:231154/1‑150 (MQ=255) ggAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGcc < 1:7279/150‑1 (MQ=255) gaTTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTa < 1:849466/150‑1 (MQ=255) ttttCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTacg < 1:2258459/150‑1 (MQ=255) ttCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCATCCTTacgac < 2:231154/150‑1 (MQ=255) gCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCt > 2:1462732/1‑150 (MQ=255) cccAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTg > 2:2143510/1‑150 (MQ=255) cccAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTg > 1:1817931/1‑150 (MQ=255) cccAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTg > 2:835778/1‑150 (MQ=255) ccAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGa < 1:141642/150‑1 (MQ=255) gcagTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAAcc < 1:370947/150‑1 (MQ=255) tttGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCtgtg < 2:392527/150‑1 (MQ=255) ttGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACgg > 2:1050187/1‑137 (MQ=255) ttGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACgg < 1:1050187/137‑1 (MQ=255) gTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCa < 1:479804/150‑1 (MQ=255) gTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCa > 2:2226900/1‑150 (MQ=255) ttCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCaa > 1:328669/1‑150 (MQ=255) tCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAac < 1:261525/150‑1 (MQ=255) tCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAac > 2:1527684/1‑150 (MQ=255) caacaaTGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAacc < 1:1239234/150‑1 (MQ=255) caaTGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAaccacc > 2:1388696/1‑150 (MQ=255) aTGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCACCGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAaccacccg > 1:2205925/1‑148 (MQ=255) ggatttattGCCATCG‑TCGGACGTCCGAACGTTGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGt > 2:2058001/8‑150 (MQ=38) tattGCCATCG‑TCGGACGTCCGAACGTTGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACt > 1:1391434/3‑150 (MQ=255) tattGCCATCG‑TCGGACGTCCGAACGTTGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACt > 1:2066498/3‑150 (MQ=255) attGCCATCG‑TCGGACGTCCGAACGTTGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTc > 1:422372/2‑150 (MQ=255) attGCCATCG‑TCGGACGTCCGAACGTTGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGATCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCCCCGGTTCACTc > 2:2417352/2‑150 (MQ=255) tGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAg > 2:96645/1‑150 (MQ=255) tGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAg < 2:456041/150‑1 (MQ=255) gCCAACGTTCGGAAGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCAAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAgg > 2:604424/1‑150 (MQ=255) cAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAGGcc > 2:1351292/1‑150 (MQ=255) cGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAGGCCGCt > 2:1047013/1‑150 (MQ=255) | ATGCAGGCCCGGTGTATCGACGTAGATCGCCTGATACGCGCCTTCAGTATGGATCCCCACAATGCGGTGACGAGTTGTCTGCGCCTTGCGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCG‑ACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCCTGCTCAGCCTTACGACGGCTTGAACCTGTGCCAACCACCGGTTCACTCAGGCCGCTG > NC_000913/2703186‑2703482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |