| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 175,149:1 | +G | 7.6% | coding (43/1422 nt) | clcA → | chloride:H(+) antiporter ClcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 175,149 | 1 | . | G | 7.6% | 671.1 / 54.9 | 170 | coding (43/1422 nt) | clcA | chloride:H(+) antiporter ClcA |
| Reads supporting (aligned to +/- strand): ref base . (81/76); new base G (4/9); total (85/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.16e-01 | |||||||||||
Only 100 of 176 total aligned reads displayed.
TATAAAAGTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGAACCAAC > NC_000913/175000‑175296 | taAAAGTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCgcgc‑gc > 1:859966/1‑150 (MQ=255) taAAAGTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCgcgc‑gc > 2:325362/1‑150 (MQ=255) aaaGTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCt > 2:297818/1‑150 (MQ=255) gTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCg > 1:2008320/1‑150 (MQ=255) ttttGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCgg < 1:1562966/150‑2 (MQ=255) tttGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggt < 1:2400399/150‑3 (MQ=255) ttGTGCCTTTTCAACATTACGCTTTGCAAATGTTTTTCATGGAACGTTCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAACTGCTCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACg < 2:700056/150‑1 (MQ=255) ttGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACg < 2:2234129/150‑1 (MQ=255) ttGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtg < 2:1374345/150‑4 (MQ=255) gtgCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCa < 1:1863695/150‑1 (MQ=255) gCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtgtttc < 1:2013215/150‑8 (MQ=255) cATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGAc > 2:2093427/1‑150 (MQ=255) tGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACt > 2:594808/1‑150 (MQ=255) tGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACt < 1:697635/150‑1 (MQ=255) cATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTc > 1:1277373/1‑150 (MQ=255) aaTTACTCTTTGAAAATTATTTTCATTTAACGTGCGATTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAATACTGATACTCCCTCTTTAGAAACACCTCAGGCCGCTC‑GCCTGCGACGCAGACAACTGATTc < 1:994478/149‑1 (MQ=255) cGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCaa > 2:118217/1‑150 (MQ=255) gCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAAc < 1:2463194/150‑1 (MQ=255) gCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAAc < 2:806448/150‑1 (MQ=255) tGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtct < 1:1792317/150‑1 (MQ=255) tGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtct > 1:138284/1‑150 (MQ=255) tGCAAAGGATTTTCAAGGAACGTCCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATCAAAACTGATACTCCCACTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtct > 2:140563/1‑150 (MQ=255) gCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtctt > 1:445603/1‑150 (MQ=255) cAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTg > 1:945943/1‑150 (MQ=255) cAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTg > 1:2314609/1‑150 (MQ=255) cAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTg > 1:2302609/1‑150 (MQ=255) ggATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgcg < 2:1022030/150‑1 (MQ=255) gATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgcgc > 1:1129829/1‑150 (MQ=255) ttttCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GTCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGa > 2:1214708/1‑150 (MQ=255) tttCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGAt < 2:1816663/150‑1 (MQ=255) tttCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGAt < 1:605062/150‑1 (MQ=255) ttCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATa > 2:246943/1‑150 (MQ=255) tGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCTTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAAc > 1:1522996/1‑150 (MQ=255) aCGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCg < 2:1977909/150‑1 (MQ=255) tGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTa > 2:991375/1‑150 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGcc > 1:236249/1‑150 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGcc < 1:1858540/150‑1 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGcc < 1:913643/150‑1 (MQ=255) aaaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCAtttt > 2:2240123/1‑150 (MQ=255) aTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGt < 1:1368059/150‑1 (MQ=255) aTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGt > 2:744496/1‑150 (MQ=255) aTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAAACCCGTTAGCCATTTTGt > 1:1929372/1‑150 (MQ=255) tGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATCAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGtt < 2:1165037/150‑1 (MQ=255) ccGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTa < 1:492931/150‑1 (MQ=255) tCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATgg < 2:2461800/150‑1 (MQ=255) cATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGTCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc < 2:898165/150‑1 (MQ=255) cATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc > 2:852452/1‑150 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc < 2:2458455/150‑1 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc < 2:445603/150‑1 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc < 2:454247/150‑1 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTAATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc < 2:2008320/150‑1 (MQ=255) gTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcgtc > 2:1725157/1‑150 (MQ=255) tGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCCGc > 1:723608/1‑150 (MQ=255) gACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCa > 1:1847321/1‑150 (MQ=255) gACCAATAAGTGATCATTGGATGAAAACTGATACCCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCa > 1:2236716/1‑150 (MQ=255) ccAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGGCAACTTCTTCAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACg > 1:1623275/1‑150 (MQ=255) ccAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACg > 2:2130187/1‑150 (MQ=255) aaTAAGTGATCATTGGATGAAAACTGATACTCCTTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCt < 2:1522996/150‑1 (MQ=255) aGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCttgtt > 1:2079122/1‑150 (MQ=255) gTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCttgttg < 2:401127/150‑1 (MQ=255) tGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTgg > 2:572732/1‑150 (MQ=255) gATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTggg > 1:744774/1‑150 (MQ=255) cATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTg > 2:1063042/1‑150 (MQ=255) cATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCAAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTg > 2:1677310/1‑150 (MQ=255) aTTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGAGGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTgg < 2:1277373/150‑1 (MQ=255) ggATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAg > 1:2137106/1‑150 (MQ=255) gATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGc < 2:728076/150‑1 (MQ=255) aTGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCg < 1:253092/150‑1 (MQ=255) tGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCgg > 2:951120/1‑150 (MQ=255) tGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCgg > 1:2308911/1‑150 (MQ=255) tGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCgg > 2:560720/1‑150 (MQ=255) gAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGt < 1:2093427/150‑1 (MQ=255) aaaCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTg > 2:1508776/1‑150 (MQ=255) aaaCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTg < 2:2418624/150‑1 (MQ=255) aaCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGc < 2:2314609/150‑1 (MQ=255) cTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCg > 1:1183080/1‑143 (MQ=255) tGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCttt < 2:2308021/150‑1 (MQ=255) aCTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGCCGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAACCCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGAc > 2:2197184/1‑150 (MQ=255) cTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACa < 1:496045/150‑1 (MQ=255) cccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACaaa > 2:67304/1‑150 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAg > 1:809243/1‑150 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAgg > 1:1673978/1‑150 (MQ=255) ttAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAGCTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTc > 1:1708657/1‑150 (MQ=255) ttAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTCTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTc < 2:503372/150‑1 (MQ=255) tAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAg > 1:313477/1‑99 (MQ=255) tAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAg < 2:313477/99‑1 (MQ=255) tAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCg < 1:737438/150‑1 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGcc < 2:1384873/150‑1 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGcc > 2:682142/1‑150 (MQ=255) ctgcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCt > 2:1577096/7‑150 (MQ=255) tgcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTg > 2:2394626/6‑150 (MQ=255) cgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGt > 1:691383/4‑150 (MQ=255) acCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGtt > 1:1231385/1‑150 (MQ=255) ccGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTg > 1:2193651/1‑150 (MQ=255) cGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGc < 2:6969/150‑1 (MQ=255) cGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGc < 2:1932376/150‑1 (MQ=255) cAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAg < 1:572732/150‑1 (MQ=255) aGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGa < 2:1218340/150‑1 (MQ=255) ggCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAACCCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGaa > 1:745190/1‑150 (MQ=255) gCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGAAc < 1:2130187/150‑1 (MQ=255) | TATAAAAGTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGAACCAAC > NC_000913/175000‑175296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |