Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,697,248:1 +T 6.5% intergenic (‑196/+25) uidR ← / ← hdhA DNA‑binding transcriptional repressor UidR/7‑alpha‑hydroxysteroid dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,697,2481.T 6.5% 493.4 / 29.3 124intergenic (‑196/+25)uidR/hdhADNA‑binding transcriptional repressor UidR/7‑alpha‑hydroxysteroid dehydrogenase
Reads supporting (aligned to +/- strand):  ref base . (58/58);  new base T (5/3);  total (63/61)
Fisher's exact test for biased strand distribution p-value = 7.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01

Only 100 of 142 total aligned reads displayed.

GTGAGCGCCTATCATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTG  >  NC_000913/1697099‑1697396
                                                                                                                                                      |                                                                                                                                                    
gTGAGCGCCTATCATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAAcacgcacg                                                                                                                                                       <  1:1435856/150‑1 (MQ=255)
    gcgcCTATCATTGGTGTTGAATAGTGCGAAGGCTCACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACGAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGgttg                                                                                                                                                  <  2:741952/150‑1 (MQ=255)
    gcgcCTATCATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGgttg                                                                                                                                                  <  2:941416/150‑1 (MQ=255)
    gcgcCTATCATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGgttg                                                                                                                                                  >  2:1544626/1‑150 (MQ=255)
          aTCATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACCGTGCGTGTTGTTTAcc                                                                                                                                            <  1:2100324/150‑1 (MQ=255)
            cATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACCGTGCGTGTTGTTTACCgg                                                                                                                                          <  2:670223/150‑1 (MQ=255)
            cATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACCGTGCGTGTTGTTTACCgg                                                                                                                                          <  2:1210235/150‑1 (MQ=255)
                  tGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCGCGGTAAACAACACGCACGGTTGTTTACCGGTCCGtt                                                                                                                                    <  2:192342/150‑1 (MQ=255)
                   gTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTa                                                                                                                                   >  1:2014269/1‑150 (MQ=255)
                    ttGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAg                                                                                                                                  <  1:1668403/150‑1 (MQ=255)
                     tGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgt                                                                                                                                 >  2:1242926/1‑150 (MQ=255)
                      gAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgtg                                                                                                                                <  1:1381016/150‑1 (MQ=255)
                      caaTAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATATAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgtg                                                                                                                                <  2:2151187/149‑1 (MQ=255)
                       aaTAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgtgt                                                                                                                               >  2:106743/1‑150 (MQ=255)
                          aGTTCGAAGGCACAATCTATTCGTTTTCTTTTCACTCTGAAATTGGTTAACCAATAGCGGTGATTTGGCTGACTTTTATTTAGCAGAGACGTTGATGAGTTTATACCGGTAAACAACACTAACGGTTGTTTACCGGTCCGTTAGTGTAtt                                                                                                                            <  2:713409/150‑1 (MQ=255)
                          aGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAtt                                                                                                                            <  2:1238324/150‑1 (MQ=255)
                          aGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAtt                                                                                                                            >  1:1637879/1‑150 (MQ=255)
                           gTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTa                                                                                                                           >  1:1782210/1‑150 (MQ=255)
                            tGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTaa                                                                                                                          >  1:1684368/1‑150 (MQ=255)
                             gCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAt                                                                                                                         >  2:1672396/1‑150 (MQ=255)
                              cGAAGGCACACTCTATTCGTATACTTTTCACTATGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAtt                                                                                                                        <  2:46015/150‑1 (MQ=255)
                              cGAAGCCACACTCTATTCGTATAATTTTCACTCTTAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGGTCTTTAGCATAGACGTTTATTAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCTGTCCGTTCGTGTATTAAtt                                                                                                                        <  1:144771/150‑1 (MQ=255)
                               gAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTg                                                                                                                       <  1:1156882/150‑1 (MQ=255)
                               gAAGCCACACTCTCTTCGTCTACTTTTCACTCTGAAATTGGTTCACGTATAGCCGTGATTTGCCGGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTTTTGTATTAATTg                                                                                                                       <  2:2433290/150‑1 (MQ=255)
                                aaGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGa                                                                                                                      <  2:647292/150‑1 (MQ=255)
                                aaGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGa                                                                                                                      <  1:2034409/150‑1 (MQ=255)
                                     acacTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGCTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTcc                                                                                                                 >  2:1334315/1‑150 (MQ=255)
                                          ctATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTAc                                                                                                            >  1:499295/1‑150 (MQ=255)
                                           tATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTAcc                                                                                                           >  2:721793/1‑150 (MQ=255)
                                             ttCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTAcccc                                                                                                         <  1:1714118/150‑1 (MQ=255)
                                                gTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                      >  1:40915/1‑150 (MQ=255)
                                                gTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                      >  2:57023/1‑150 (MQ=255)
                                                gTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                      >  2:1451651/1‑150 (MQ=255)
                                                gTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                      >  1:1453538/1‑150 (MQ=255)
                                                   taCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCaccacc                                                                                                   <  1:1185598/150‑1 (MQ=255)
                                                    aCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCg                                                                                                  >  1:2350746/1‑150 (MQ=255)
                                                     cTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCgg                                                                                                 <  1:1403818/150‑1 (MQ=255)
                                                     cTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCAGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCgg                                                                                                 >  1:1704600/1‑150 (MQ=255)
                                                         tCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGAc                                                                                             <  1:2360162/150‑1 (MQ=255)
                                                            ctctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGt                                                                                          >  1:2255078/1‑150 (MQ=255)
                                                            ctctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGt                                                                                          >  1:185002/1‑150 (MQ=255)
                                                             tctGCAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATTAGTTTATCCCGGTAAACAACACGCACGGGTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTg                                                                                         <  2:1340928/150‑1 (MQ=255)
                                                              ctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTAATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTga                                                                                        >  1:2019801/1‑150 (MQ=255)
                                                              cggctaTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTga                                                                                        >  1:83780/6‑150 (MQ=255)
                                                              cggctaTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTga                                                                                        >  1:1330152/6‑150 (MQ=255)
                                                               tGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTgag                                                                                       <  1:1003044/150‑1 (MQ=255)
                                                               tGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTgag                                                                                       >  1:2395856/1‑150 (MQ=255)
                                                                 aaaTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGaa                                                                                     >  2:202973/1‑150 (MQ=255)
                                                                  aaTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAt                                                                                    >  1:1401398/1‑150 (MQ=255)
                                                                     tGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTg                                                                                 <  1:1382864/150‑1 (MQ=255)
                                                                      ggTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGt                                                                                >  2:1251657/1‑150 (MQ=255)
                                                                       gTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTc                                                                               >  2:933210/1‑150 (MQ=255)
                                                                                tAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTAccc                                                                      >  1:411297/1‑150 (MQ=255)
                                                                                 aGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCa                                                                     <  2:758731/150‑1 (MQ=255)
                                                                                  gCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCTTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAg                                                                    >  2:58133/1‑150 (MQ=255)
                                                                                     gTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTc                                                                 <  2:296763/150‑1 (MQ=255)
                                                                                      tGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCg                                                                >  1:1208480/1‑150 (MQ=255)
                                                                                      tGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCg                                                                <  2:763038/150‑1 (MQ=255)
                                                                                      tGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCg                                                                >  2:1495724/1‑150 (MQ=255)
                                                                                       gATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGGTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCgc                                                               >  1:1585482/1‑150 (MQ=255)
                                                                                           tGGCTGCCAGTTATTTAGCAGAGCCGTTGATGAGTTTATCCCGGTAAACAACACGCACGGGTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGAACCCCACCACCGGAGACGGTGAGACTTTGTCCGCTTACCCAGCTCgcagca                                                           >  2:738755/1‑150 (MQ=255)
                                                                                            ggCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGATTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGcagcag                                                          >  2:1506984/1‑150 (MQ=255)
                                                                                             gCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAgg                                                         >  1:499194/1‑150 (MQ=255)
                                                                                              cTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGc                                                        >  1:101389/1‑150 (MQ=255)
                                                                                                 ccAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAg                                                     <  1:413113/150‑1 (MQ=255)
                                                                                                 ccAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAg                                                     <  1:858946/150‑1 (MQ=255)
                                                                                                      tATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAg                                                >  1:1136766/1‑150 (MQ=255)
                                                                                                        tttAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGa                                              <  1:1578520/150‑1 (MQ=255)
                                                                                                          tAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAAc                                            >  2:1718934/1‑150 (MQ=255)
                                                                                                                   cGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCg                                   <  2:1782210/150‑1 (MQ=255)
                                                                                                                     ttGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGtt                                 >  2:83899/1‑150 (MQ=255)
                                                                                                                      tgatgaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTa                                <  2:1401398/150‑1 (MQ=255)
                                                                                                                      tgatgaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTa                                <  1:296110/150‑1 (MQ=255)
                                                                                                                       gatgaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAg                               <  2:1684368/150‑1 (MQ=255)
                                                                                                                       gatgaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAg                               <  2:499295/150‑1 (MQ=255)
                                                                                                                        atgaGTTTCTCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGc                              <  2:616671/150‑1 (MQ=255)
                                                                                                                            gTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGCCGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAata                          >  1:1035665/1‑150 (MQ=255)
                                                                                                                              ttATCGCGGTAAACAACACGGACGGTTGTTTACAGGTCCGTTAGTGTATTAATTTAGCTCCTGTACCCCACGACCGTATACGGTTATAATTTGTACGCTTAAACAGCTCGCTGGAGGATAGGATAGGAACAGCGGTGCGTTATCAATATc                        <  2:1013223/150‑1 (MQ=255)
                                                                                                                               tATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGCGCAAAGGAGCAGCGCTGCGTTAGCAATATCt                       >  2:2307893/1‑150 (MQ=255)
                                                                                                                               cggaccGGTAAACAACCGTGCGTGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCt                       >  2:1954709/5‑150 (MQ=255)
                                                                                                                                ggaccGGTAAACAACCGTGCGTGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATAtttt                      >  1:446114/4‑150 (MQ=255)
                                                                                                                                 tCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTg                     >  2:738176/1‑150 (MQ=255)
                                                                                                                                 tCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGCATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTg                     <  1:2134518/150‑1 (MQ=255)
                                                                                                                                  cccGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTACTTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGc                    <  1:1977294/150‑1 (MQ=255)
                                                                                                                                  cccGGTAAACAACACGCACGGCTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGc                    <  1:1334315/150‑1 (MQ=255)
                                                                                                                                   ccGGTAAACAACCGTGCGTGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGACCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCg                   >  1:1517532/1‑150 (MQ=255)
                                                                                                                                    cGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCgg                  <  1:510700/150‑1 (MQ=255)
                                                                                                                                    cGGTAAACAACCGTGCGTGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCgg                  >  1:118453/1‑150 (MQ=255)
                                                                                                                                     ggTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGt                 >  1:784337/1‑150 (MQ=255)
                                                                                                                                         aacaacACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGc             >  2:227482/1‑150 (MQ=255)
                                                                                                                                          acaacaCGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGcc            >  2:2123951/1‑150 (MQ=255)
                                                                                                                                           caacaCGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGccc           <  2:794309/150‑1 (MQ=255)
                                                                                                                                            aacaCGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCa          <  2:187220/150‑1 (MQ=255)
                                                                                                                                             acacGCACGTTTGTTTACCGGTCCTTTAGTTTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGTCCCAg         <  2:1145387/150‑1 (MQ=255)
                                                                                                                                             acacGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAg         <  2:440205/150‑1 (MQ=255)
                                                                                                                                              cacgcacgGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGa        <  1:75902/150‑1 (MQ=255)
                                                                                                                                                cgcacgGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACg      <  2:412546/150‑1 (MQ=255)
                                                                                                                                                   acgGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCACTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCt   <  1:933210/150‑1 (MQ=255)
                                                                                                                                                    cgGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTg  >  1:286946/1‑150 (MQ=255)
                                                                                                                                                    cgGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTg  <  2:40915/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
GTGAGCGCCTATCATTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTG  >  NC_000913/1697099‑1697396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: