| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1062410 | NA (NA) | 6 (0.040) | 5/264 | NT | NA | noncoding (35/37 nt) | other | REP91a |
| ? | NC_000913 | = 1062443 | NA (NA) | noncoding (2/37 nt) | other | REP91a | |||||
AAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCgcctga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1062263‑1062410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGGTAAC < NC_000913/1062443‑1062290 AAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAACCAGATAACGTCGTTTGTGCGC > 2:1333603/1‑150AAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGC < 1:676947/150‑1 AACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTG < 2:1237876/150‑1 CTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGATGC > 2:946074/1‑150 CTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTG < 2:2399690/146‑1 CTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTG > 1:2399690/1‑146 ACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTTGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCTAAACGCGTCTTTTCAGG < 2:1066263/150‑1 ACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCTAAACGCGTCTTTTCAGG < 1:2248460/150‑1 CAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGATGCGACGCTAAACGCGTCTTTTCAGGCG < 1:898994/150‑1 GAGTTTGTTGCGCGGTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCA < 2:1370151/150‑1 AGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCAC < 1:946074/150‑1 TTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAA < 2:2390790/150‑1 GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGTTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGCCAACGCGCAACAAACTCTGG > 2:2133887/1‑150 GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGTCAACGCGCAACAAACTCTGG < 1:292854/150‑1 GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGG < 1:2358629/150‑1 GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGG < 1:1975649/150‑1 GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGG < 1:1675559/150‑1 CCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGGT < 1:750121/150‑1 GATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGGTAAC > 1:1133907/1‑150 AAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCgcctga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1062263‑1062410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGATGCGACGCTAAACGCGTCTTTTCAGGCGCACAAACGACGTTATCTGTTTTGGTGGTCGCACTCCACTAACACCAGCAATAACTGGCTTAGTGCCGCGTAAAAACCAAAGCTGTCATACTGACGACAACGCGCAACAAACTCTGGTAAC < NC_000913/1062443‑1062290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |