New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1321818 =	144 (1.010)	9 (0.060)	8/272	NT	6.6%	coding (1129/1563 nt)	trpE	anthranilate synthase subunit TrpE
	?	NC_000913	= 1541637	112 (0.790)					coding (954/3741 nt)	narZ	nitrate reductase Z subunit alpha

GCCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1321968‑1321818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGCG  <  NC_000913/1541637‑1541489                                                                                                                                                                                                                                                                                                              GCCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATT                                                                                                                                                        <  2:2259678/150‑1  CCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTT                                                                                                                                                       >  1:391712/1‑150  CCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTT                                                                                                                                                       >  2:1347815/1‑150         ACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTC                                                                                                                                                <  1:611787/150‑1                 GCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCC                                                                                                                                        <  2:2222794/150‑1                            GCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACT                                                                                                                             <  1:1424762/150‑1                                         TGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTG                                                                                                                <  1:1624768/150‑1                                                  ATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTA                                                                                                       <  1:1058867/150‑1                                                                       TGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGT                                                                                  <  1:1876976/150‑1                                                                                                       GAACATCTGATGCTGTTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACG                                                  >  1:1759304/1‑150                                                                                                                ATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGn                                         <  1:692550/150‑2                                                                                                                              CGCCCGTAATGATCTGGCACGCATTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCA                           >  2:168327/1‑150                                                                                                                                                      TTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGC   <  1:1352211/150‑1                                                                                                                                                      TTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGC   <  1:323706/150‑1                                                                                                                                                       TTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGCG  <  1:1283882/150‑1                                                                                                                                                                                                                                                                                                              GCCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1321968‑1321818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGCG  <  NC_000913/1541637‑1541489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.