| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1338512 = | 129 (0.900) | 10 (0.080) | 8/250 | NT | 8.1% | intergenic (+6/+58) | acnA/ribA | aconitate hydratase 1/GTP cyclohydrolase 2 |
| ? | NC_000913 | 1338549 = | 110 (0.850) | intergenic (+43/+21) | acnA/ribA | aconitate hydratase 1/GTP cyclohydrolase 2 | |||||
TTAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1338673‑1338512‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaagcaaatGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTCGA > NC_000913/1338549‑1338697 TTAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAAC < 2:1150538/150‑1 TAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACC < 2:1305693/150‑1 TAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACC > 1:713743/1‑150 AATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCG > 2:1888548/1‑150 ATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGa > 2:1480323/1‑149 ATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGG < 1:2317079/150‑1 ATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCA > 2:608170/1‑150 TGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAG < 2:1385714/150‑1 GTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGAGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGC > 1:1131735/1‑150 TGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAA > 1:2460356/1‑150 CGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGGAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTGTCGGCTTTGGTt > 1:2017456/1‑149 AATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCGCATTTTCTCGGCTTTGGTATCGAGATAATGTTGGTTATTGGGGTT > 1:727004/1‑150 ACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGc > 1:1774683/1‑149 TGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGG > 1:1342048/1‑150 AATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTAC > 1:1182488/1‑150 TTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGCGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAGTGTTCGTTATTGGGGTTACGACCTACCATCAATGGTACGCGgtg > 1:1173296/1‑147 TTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTC > 1:294282/1‑150 TTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCA > 2:2114343/1‑150 TTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCA > 2:2122864/1‑150 CTTGCCGGAAGCAAAATAACCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACA > 1:1225403/1‑150 CCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGG < 1:819096/150‑1 CCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGG < 1:927344/150‑1 CCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGG > 2:2297201/1‑150 CCGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGG < 2:567547/150‑1 CGGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGT > 1:1529082/1‑150 CGGCAAGCAAATGAATTACACAATCCAAGAGGCTTATTTGTTCAGCAAATGGCCCATTTTCTAGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTAAAATCAATGGTACGCCTTCAACAATATTAATACCTGCTTCGGT > 2:2435350/1‑150 GGCAAGCAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTACCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTC > 1:1726373/1‑150 GGCAAGCAAATGAATTAAACAATGCAACAGGGTTATTTGTTCAGCAAATGGCAGATTTTATCGGCTTTGGTATAGAGATAATGTTCGAAATTGCGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATACCTGCTTCGGTC > 2:1089927/1‑150 CAAGCAAATGAATTAGAGAATGCAAGAGGGTTTTTTGTTCATCTAATGGCCCTTTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTAGGACCTAGATTCAATGTTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAG < 1:61040/150‑1 CAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATT > 1:2137119/1‑150 CAAATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATT > 1:2143026/1‑150 AATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTC > 2:184962/1‑150 AATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTC < 2:279805/150‑1 AATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTC < 1:1084493/150‑1 ATGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTCG < 2:1342048/150‑1 TGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTAGA > 1:672259/1‑150 TTAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAACCCTCTTGCATTGTGTAATTCATTTGCTTGCCGGAAGCAAAATAACCGGCAAGCAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1338673‑1338512‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaagcaaatGAATTACACAATGCAAGAGGGTTATTTGTTCAGCAAATGGCCCATTTTCTCGGCTTTGGTATCGAGATAATGTTCGTTATTGGGGTTACGACCTACAATCAATGGTACGCGTTCAACAATATTAATCCCTGCTTCGGTCAGAATTTCGA > NC_000913/1338549‑1338697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |