| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1435738 | 355 (2.480) | 19 (0.140) | 12/264 | NT | 5.1% | intergenic (‑119/+22) | uspF/ompN | nucleotide binding filament protein/outer membrane porin N |
| ? | NC_000913 | = 1435745 | 364 (2.660) | intergenic (‑126/+15) | uspF/ompN | nucleotide binding filament protein/outer membrane porin N | |||||
GGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1435584‑1435738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTCCC < NC_000913/1435745‑1435597 GGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAG < 2:170054/150‑1 GAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGC > 1:2102370/1‑150 TATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGC < 2:2092715/150‑1 AAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGC < 1:913526/150‑1 AAGAATCCTTCTGTTCATAAAACCTCCTGTTTTAGTATGCGCATTAAGTGTAACGCGAGATGACAGTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCATAGGAGGAAGAATAAGCAGAAAATGCCCGCTGTTATGGCGGGC < 2:1507260/150‑1 AATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTT < 1:1227709/150‑1 AATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTT < 1:1252313/150‑1 ATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTT < 1:267182/150‑1 CGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTC < 2:748429/150‑1 CGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTC < 1:55922/150‑1 GTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCT < 2:14067/150‑1 GTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCT < 1:1853184/150‑1 TTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTG < 1:595566/150‑1 TCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGC < 1:2271963/150‑1 TCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGC < 1:751582/150‑1 TCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGC < 1:633653/150‑1 CTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGCT < 1:1057050/150‑1 CTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGCT < 2:168778/150‑1 TCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGCTTATT < 2:615466/150‑1 CCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCC < 2:1921243/150‑1 TATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATT > 1:1584531/1‑150 CGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAA < 2:1584531/150‑1 GCCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTT > 2:1951706/1‑150 GCCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTT > 2:1483694/1‑150 CCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTG < 2:1811537/150‑1 CCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTG > 1:2443453/1‑150 CCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGT > 1:812210/1‑150 CCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGT > 1:666506/1‑150 CGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTC < 2:534202/150‑1 CGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTC < 2:720912/150‑1 CGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTC < 1:2349900/150‑1 GCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTCC < 1:22448/150‑1 GCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTCC < 2:986910/150‑1 CTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTCCC < 2:1459933/150‑1 CTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTCCC < 2:657763/150‑1 GGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1435584‑1435738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTCATTACACAAAAAGTGTCATCTGGCGTTACACTTTATGCGGATACTAAAACAGGAGGTTTTATGAACAGAACGATTCTTGTCCC < NC_000913/1435745‑1435597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |