| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4404334 = | 160 (1.120) | 15 (0.110) | 9/264 | NT | 9.1% | intergenic (+30/‑52) | hflC/yjeT | regulator of FtsH protease/DUF2065 domain‑containing protein YjeT |
| ? | NC_000913 | 4404361 = | 146 (1.070) | intergenic (+57/‑25) | hflC/yjeT | regulator of FtsH protease/DUF2065 domain‑containing protein YjeT | |||||
TCATCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4404488‑4404334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtggTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATT > NC_000913/4404361‑4404508 TCATCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGC > 2:401800/1‑150 CATCGCAGAGATCATCTTATTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACAGAAATCCCTGAGGATGCG > 2:1219149/1‑150 ATCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGG > 2:772728/1‑150 TCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGT < 1:2366371/150‑1 TCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGT < 1:328420/150‑1 TCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGAATGTCGAATTCATTCATTATCCTTATAGAAAAATAAAACCAACGACATCCCTCAGGATGCGGT > 2:1928251/1‑150 CGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTG < 1:982881/150‑1 GCAGAGATCATCTTCTTCCATGTCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGG > 2:666652/1‑150 GCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGG > 2:378525/1‑150 GCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGG > 1:424951/1‑150 GCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGC < 2:2351743/145‑1 GCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGC > 1:2351743/1‑145 CCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATG > 2:165854/1‑150 AGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAA > 1:1574958/1‑150 GAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAG > 1:842729/1‑150 GAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAG > 1:2289229/1‑150 AAGAAAACCACCGACATCCCTGAGGATGCGGTGGCTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGA > 1:362185/1‑150 ACCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTG > 1:2005463/1‑150 ACCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTG > 2:2349220/1‑150 CCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGC > 1:2409810/1‑150 CCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGC > 2:1558883/1‑150 CCACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGC > 2:999064/1‑150 CACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCG > 2:1485688/1‑150 CACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCG > 2:1513551/1‑150 ACCGACATCCCTGATGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGA > 1:1011322/1‑150 ACCGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGTAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGA > 1:1427596/1‑150 CGACATCCCTGAGGATGCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATG < 1:165854/150‑1 CGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAA < 2:1574958/150‑1 CGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAA > 2:1160029/1‑150 CGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAA > 2:105361/1‑150 GGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATT > 2:184113/1‑150 TCATCGCAGAGATCATCTTCTTCCATGCCTTCGGGTAAAGCATCGGCCCTAAACCTTCCAGTACCAAAACCAGGGCAAGCGCCAGCCAGATTGTCGAATTCATTCATTATCCTTATAGAAAAAGAAAACCACCGACATCCCTGAGGATGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4404488‑4404334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtggTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATT > NC_000913/4404361‑4404508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |