New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1243718 =131 (0.920)7 (0.050) 6/262 NT 5.3% coding (539/612 nt) emtA lytic murein transglycosylase E
?NC_000913 1243755 = 126 (0.930)coding (576/612 nt) emtA lytic murein transglycosylase E

Only 100 of 150 total aligned reads displayed.

GGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTC  >  NC_000913/1243570‑1243867
                                                                                                                                                    |                                                                                                                                                     
ggcaTTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTTGAACACATa                                                                                                                                                      <  1:498922/150‑1 (MQ=255)
ggcaTTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTa                                                                                                                                                      >  1:645597/1‑150 (MQ=255)
ggcaTTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTa                                                                                                                                                      <  1:1615534/150‑1 (MQ=255)
 gagcttccgttttcttaacgtcagcccgacggtggagcggcaattacagcggattattttctctctcgagcgagaagcccgggaaaaagcggacaaagtgcgcgactgatttacatcgcgtccagtgcctgctcaagtttgtagataTAg                                                                                                                                                     <  2:367156‑M1/3‑1 (MQ=255)
   gcttccgttttcttaacgtcagcccgacggtggagcggcaattacagcggattattttctctctcgagcgagaagcccgggaaaaagcggacaaagtgcgcgactgatttacatcgcgtccagtgcctgctcaagtttgtagataTAgcg                                                                                                                                                   <  1:1193601‑M1/5‑1 (MQ=255)
    ttGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACTCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAgcgc                                                                                                                                                  <  2:906893/150‑1 (MQ=255)
      gAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGa                                                                                                                                                >  2:1313223/1‑150 (MQ=255)
       aaGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGaa                                                                                                                                               >  1:2221895/1‑150 (MQ=255)
        aGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGaaa                                                                                                                                              <  2:674459/150‑1 (MQ=255)
         gATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAAt                                                                                                                                             >  1:678596/1‑150 (MQ=255)
           tttcttaacgtcagcccgacggtggagcggcaattacagcggattattttctctctcgagcgagaagcccgggaaaaagcggacaaagtgcgcgactgatttacatcgcgtccagtgcctgctcaagtttgtagataTAGCGCGAAATCa                                                                                                                                           <  1:1380669‑M1/13‑1 (MQ=255)
             cGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAgcg                                                                                                                                                   <  2:1836054/140‑1 (MQ=255)
             cGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAgcg                                                                                                                                                   >  1:1836054/1‑140 (MQ=255)
               aaGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCt                                                                                                                                       <  1:1415366/150‑1 (MQ=255)
                aGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTg                                                                                                                                      <  1:171007/150‑1 (MQ=255)
                 ggTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTgc                                                                                                                                     >  2:1621217/1‑150 (MQ=255)
                     cTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGcgccg                                                                                                                                 >  2:1100919/1‑150 (MQ=255)
                       gCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCa                                                                                                                               >  1:445866/1‑150 (MQ=255)
                       gCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCa                                                                                                                               >  1:177581/1‑150 (MQ=255)
                        cAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCATCGATTTTGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCTCCCTGCGCCGCAg                                                                                                                              <  2:437994/150‑1 (MQ=255)
                          atatGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGc                                                                                                                            >  2:1285225/1‑150 (MQ=255)
                             tGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTcc                                                                                                                         >  1:2154865/1‑150 (MQ=255)
                             tGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTcc                                                                                                                         >  1:597420/1‑150 (MQ=255)
                             tGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTcc                                                                                                                         >  2:1513173/1‑150 (MQ=255)
                                gcTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCcgcg                                                                                                                      <  2:2269132/150‑1 (MQ=255)
                                     gcggcaattacagcggattattttctctctcgagcgagaagcccgggaaaaagcggacaaagtgcgcgactgatttacatcgcgtccagtgcctgctcaagtttgtagataTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCtata                                                                                                                 >  1:559984‑M1/112‑150 (MQ=255)
                                      ggtgTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTatat                                                                                                                >  1:80252/1‑150 (MQ=255)
                                       gtgtCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTatata                                                                                                               >  2:57864/1‑149 (MQ=255)
                                            aTACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACaa                                                                                                          >  1:702753/1‑150 (MQ=255)
                                             tACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACaaa                                                                                                         >  2:1519292/1‑150 (MQ=255)
                                               cGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACt                                                                                                       >  1:1321719/1‑150 (MQ=255)
                                                gCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACtt                                                                                                      >  1:1878049/1‑150 (MQ=255)
                                                 cTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTg                                                                                                     >  1:852335/1‑150 (MQ=255)
                                                     cGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCa                                                                                                 >  2:2146239/1‑150 (MQ=255)
                                                     cGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCa                                                                                                 <  1:116053/150‑1 (MQ=255)
                                                       gggCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAgg                                                                                               >  2:1525432/1‑150 (MQ=255)
                                                       gggCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAgg                                                                                               >  1:1804229/1‑150 (MQ=255)
                                                        ggCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGc                                                                                              <  2:391476/150‑1 (MQ=255)
                                                        ggCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGc                                                                                              >  1:709151/1‑150 (MQ=255)
                                                            ggTGCGCTGCTACGGACTTACTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTg                                                                                          >  1:2180714/1‑150 (MQ=255)
                                                                  ctgctACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGAcgcg                                                                                    >  1:1050020/1‑150 (MQ=255)
                                                                    gctACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGAt                                                                                  >  1:593183/1‑150 (MQ=255)
                                                                    gctACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGAt                                                                                  <  1:645933/150‑1 (MQ=255)
                                                                    gctACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGAt                                                                                  >  1:758521/1‑150 (MQ=255)
                                                                      tACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGt                                                                                <  2:1709504/150‑1 (MQ=255)
                                                                      tACGGACTTTCTCGTCAGAACGGAAAAAGGCGATCAGCAAAATCAACGCTTTGGATGCTGCCGAGTTCCTCGAACACGAAGCGCGAAATCCACATGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGAAGTCACTGGACGCGATGt                                                                                >  2:1253737/1‑150 (MQ=255)
                                                                         ggACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTaaa                                                                             <  2:1321719/150‑1 (MQ=255)
                                                                          gACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTGGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAAt                                                                            >  1:476856/1‑150 (MQ=255)
                                                                           aCTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATc                                                                           <  2:445866/150‑1 (MQ=255)
                                                                            cTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCa                                                                          >  2:47555/1‑150 (MQ=255)
                                                                            cTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCa                                                                          >  1:373413/1‑150 (MQ=255)
                                                                            cTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCa                                                                          <  2:645597/150‑1 (MQ=255)
                                                                             tttCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAg                                                                         <  2:1878049/150‑1 (MQ=255)
                                                                               tctcGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTc                                                                       >  1:1567879/1‑150 (MQ=255)
                                                                                ctcGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTcg                                                                      <  2:597420/150‑1 (MQ=255)
                                                                                ctcGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTcg                                                                      <  2:56728/150‑1 (MQ=255)
                                                                                ctcGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTcg                                                                      <  2:275693/150‑1 (MQ=255)
                                                                                 tcGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTcgc                                                                     >  1:1302435/1‑150 (MQ=255)
                                                                                  cGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTcgcg                                                                    >  1:1238220/1‑150 (MQ=255)
                                                                                   gTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCgcgc                                                                   >  1:478349/1‑150 (MQ=255)
                                                                                   gTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCgcgc                                                                   <  2:1607851/150‑1 (MQ=255)
                                                                                     cAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCAc                                                                 <  1:587700/150‑1 (MQ=255)
                                                                                       gATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACtt                                                               >  1:1507017/1‑150 (MQ=255)
                                                                                       gATCGGAAAAAGGCCATCAGCAAAATCAACGATTTGGATGATGACGAGTTCCTCGAACACGTAGCGAGAAATCACCCTGCGCCGCAGGCTGCGCGATATATCTACAAACTTGAGCAGGCACTGGACGAGATGTAAATCAGTCGCGCACtt                                                               >  1:912858/1‑150 (MQ=255)
                                                                                        aTCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACttt                                                              >  1:2058547/1‑150 (MQ=255)
                                                                                        aTCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACttt                                                              >  1:1994475/1‑150 (MQ=255)
                                                                                        aTCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACttt                                                              >  1:2050077/1‑150 (MQ=255)
                                                                                           ggAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTc                                                           >  1:352060/1‑150 (MQ=255)
                                                                                            gAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTcc                                                          >  1:67824/1‑150 (MQ=255)
                                                                                            gAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTcc                                                          <  2:1946720/150‑1 (MQ=255)
                                                                                                aaGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCtt                                                      <  2:1804229/150‑1 (MQ=255)
                                                                                                   gCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCttttt                                                   <  1:1285225/150‑1 (MQ=255)
                                                                                                     gATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTcc                                                 >  2:1900331/1‑150 (MQ=255)
                                                                                                        cAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCgg                                              <  2:825400/150‑1 (MQ=255)
                                                                                                         aGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCggg                                             <  1:1716559/150‑1 (MQ=255)
                                                                                                          gCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGc                                            >  2:1800420/1‑150 (MQ=255)
                                                                                                           cAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCt                                           <  1:2137318/150‑1 (MQ=255)
                                                                                                           cAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCt                                           <  2:1772878/150‑1 (MQ=255)
                                                                                                              aaTCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTtct                                        <  1:40303/150‑1 (MQ=255)
                                                                                                               aTCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTtctc                                       >  2:2071303/1‑150 (MQ=255)
                                                                                                               aTCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTtctc                                       >  2:548372/1‑150 (MQ=255)
                                                                                                                  aaCGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTctcgct                                    >  1:1232036/1‑150 (MQ=255)
                                                                                                                  aaCGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTctagct                                    <  1:1313223/150‑1 (MQ=255)
                                                                                                                   aCGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTctcgctc                                   >  1:772973/1‑150 (MQ=255)
                                                                                                                    cGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTctcgctcg                                  >  1:1942351/1‑150 (MQ=255)
                                                                                                                     gATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCga                                 >  2:1922170/1‑150 (MQ=255)
                                                                                                                      aTTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCgag                                <  2:901688/150‑1 (MQ=255)
                                                                                                                      aTTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCgag                                <  2:759126/150‑1 (MQ=255)
                                                                                                                          ggATGCTGACGAGTTGCTCGACCACGTAGCGCGCAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAACCTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTGCCCGGGCTTCTCGCTCgagagag                            >  2:2289803/1‑150 (MQ=255)
                                                                                                                            aTGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGaa                          <  2:1171671/150‑1 (MQ=255)
                                                                                                                               cTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAaat                       <  2:177581/150‑1 (MQ=255)
                                                                                                                                 gACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAaataa                     >  2:1030078/1‑150 (MQ=255)
                                                                                                                                      gTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGTGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGc                >  1:718722/1‑150 (MQ=255)
                                                                                                                                      gTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGc                <  2:2154865/150‑1 (MQ=255)
                                                                                                                                      gTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGc                >  1:622692/1‑150 (MQ=255)
                                                                                                                                      gTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGc                >  1:1610764/1‑150 (MQ=255)
                                                                                                                                          cTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTa            >  1:1105084/1‑150 (MQ=255)
                                                                                                                                             taaCATGTAGCGCGATATCACGCTGCGCCGCAGGCTCCGCTCTTTATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCATTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAAtt         <  1:243244/149‑1 (MQ=255)
                                                                                                                                             gAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAAtt         <  1:248729/150‑1 (MQ=255)
                                                                                                                                                    TAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTc  <  2:1173693‑M1/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTC  >  NC_000913/1243570‑1243867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.