New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1463445237 (1.660)17 (0.130) 7/262 NT 6.8% intergenic (+7/‑94) paaK/paaX phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX
?NC_000913 = 1463482 242 (1.780)intergenic (+44/‑57) paaK/paaX phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX

Only 100 of 340 total aligned reads displayed.

AGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGG  >  NC_000913/1463296‑1463594
                                                                                                                                                     |                                                                                                                                                        
aGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG                                                                                                                                                          <  1:1497874‑M1/150‑1 (MQ=255)
    aTGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTg                                                                                                                                                   <  1:1175157/150‑1 (MQ=255)
       ccaccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGcc                                                                                                                                                >  2:1553448/1‑150 (MQ=255)
        caccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGccc                                                                                                                                               >  2:214521/1‑150 (MQ=255)
         accaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCt                                                                                                                                              >  2:1904048/1‑150 (MQ=255)
              ccccaccATCGACTTAATCCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGTGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCtggtgg                                                                                                                                         >  2:2234093/6‑150 (MQ=255)
              cTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCtggtgg                                                                                                                                         >  2:1478856/1‑150 (MQ=255)
                 cgcCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgc                                                                                                                                         >  2:2292806‑M1/1‑133 (MQ=255)
                     aTCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCATTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAg                                                                                                                                  <  1:456225/150‑1 (MQ=255)
                      tCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAgc                                                                                                                                 <  1:1089386/150‑1 (MQ=255)
                          aTTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCa                                                                                                                             >  1:744947/1‑150 (MQ=255)
                          aTTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCa                                                                                                                             >  1:732828/1‑150 (MQ=255)
                           ttAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAg                                                                                                                            >  1:2104580/1‑150 (MQ=255)
                             aaGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAggg                                                                                                                          <  1:98805/150‑1 (MQ=255)
                              aGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGc                                                                                                                         >  1:549820/1‑150 (MQ=255)
                               gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGtctggccctggcgctttaccccaccagggcc                                                                                                                           <  1:802998‑M1/150‑32 (MQ=255)
                               gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                                        >  2:2175182/1‑150 (MQ=255)
                                tCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCa                                                                                                                       >  1:647136/1‑150 (MQ=255)
                                tCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCa                                                                                                                       <  2:2044399/150‑1 (MQ=255)
                                  tgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCGACTTCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                                        >  1:271472‑M1/110‑150 (MQ=255)
                                  tgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCGACTTCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                                        >  1:678710‑M1/110‑150 (MQ=255)
                                  gATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgctttaccccaccagggcc                                                                                                                        <  1:2292806‑M1/150‑35 (MQ=255)
                                    tggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAg                                                                                                                   >  1:1046225/1‑150 (MQ=255)
                                       cactgacctgaacagcgtttaccgcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCGACTTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAg                                                                                                                   >  2:1025328‑M1/105‑150 (MQ=255)
                                        ggggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcga                                                                                                               >  2:224993‑M2/1‑147 (MQ=255)
                                         gggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgat                                                                                                              >  2:78720‑M2/1‑146 (MQ=255)
                                         gggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTCTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgat                                                                                                              <  1:1810869‑M2/150‑5 (MQ=255)
                                           gagctctACCGATGTGATGATCGTTAACTGTGCCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATAc                                                                                                            <  2:320958/147‑1 (MQ=255)
                                           gATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatac                                                                                                            >  1:374037‑M2/1‑144 (MQ=255)
                                             tctcTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGa                                                                                                          >  1:2360694/1‑150 (MQ=255)
                                              ctctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAc                                                                                                         >  1:1961053/1‑150 (MQ=255)
                                               tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTAGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAcc                                                                                                        <  2:1066337/150‑1 (MQ=255)
                                               ggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCGACTTCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                                        >  1:1657496‑M1/97‑137 (MQ=255)
                                               gctACCGATGTGATGAGCGTTAACTGTGGCAGTATCCCGCGTGCAGAAGGCAAGGCGGGGCGGGTGTTTGAGCTGCGCAATATTGTGGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAcc                                                                                                        <  1:185538/149‑1 (MQ=255)
                                                gaacagcgtttacagcatgttgcataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttattaatcatcgcacaggtCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATAGGACCt                                                                                                       >  2:195699‑M1/96‑150 (MQ=255)
                                                ctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                                       >  1:869400/1‑150 (MQ=255)
                                                 tACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCtg                                                                                                      >  2:773614/1‑150 (MQ=255)
                                                           atgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGAGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAtt                                                                                            >  2:2013911/1‑150 (MQ=255)
                                                              atCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCGGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCGGGGGTATGAGTCAt                                                                                         >  2:1102715/1‑150 (MQ=255)
                                                                 gtgaaCTGTGGCAGCATCCCGCGTGCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGGGCCTGACGTATCG‑‑‑TCGGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATaaa                                                                                      <  2:823966/147‑1 (MQ=255)
                                                                 gTTAACTGTGGCAGTATCCCTCGTTCCGAAGGCATGGCGTGTCGGGTGGTTGTTGTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGGGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATaaa                                                                                      <  1:1900418/150‑1 (MQ=255)
                                                                 gTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATaaa                                                                                      >  2:401610/1‑150 (MQ=255)
                                                                 gTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATaaa                                                                                      <  2:1700272/150‑1 (MQ=255)
                                                                 gTTAACTGTGGCAGTATACCGCGTTCAGAAGGCAAGGCGTGTGGGGTGTTTGCTCTGCGCAATATTGTTGGTGCCTGCCGTCTCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGGTGTCGATACGACCTGTTCTATGATTCATaaa                                                                                      >  2:1566041/1‑150 (MQ=255)
                                                                  ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAAt                                                                                     <  1:2259066/150‑1 (MQ=255)
                                                                   tAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATc                                                                                    <  1:502805/150‑1 (MQ=255)
                                                                     aCTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcac                                                                                  <  2:1770233/150‑1 (MQ=255)
                                                                      cTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGTGTAAAGAGACATGGAAAGAAGTAGATACGAAATGTGATATGAATAATaaaaaaca                                                                                 >  1:2404670/1‑145 (MQ=255)
                                                                      cTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcaca                                                                                 >  2:2094981/1‑150 (MQ=255)
                                                                        gtgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaac                                                                               >  2:561592/1‑150 (MQ=255)
                                                                        gtgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaac                                                                               <  2:1190334/150‑1 (MQ=255)
                                                                         tgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaaca                                                                              <  2:1941966/150‑1 (MQ=255)
                                                                           gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgctttaccccaccagggc                                                                                                                         <  2:897068‑M1/108‑34 (MQ=255)
                                                                           gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgctttaccccaccagggc                                                                                                                         >  1:897068‑M1/1‑75 (MQ=255)
                                                                            cAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATa                                                                           <  1:1377625/150‑1 (MQ=255)
                                                                               tATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaaca                                                                        <  2:1372489/150‑1 (MQ=255)
                                                                                aTCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTGTGATTCATAAATCACAACAATaacaa                                                                       <  2:1333127/150‑1 (MQ=255)
                                                                                aTCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaacaa                                                                       >  2:1256712/1‑150 (MQ=255)
                                                                                 tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaacaac                                                                      >  1:1018492/1‑150 (MQ=255)
                                                                                 tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaacaac                                                                      >  1:1540226/1‑150 (MQ=255)
                                                                                        ttCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGa                                                               <  2:519426/150‑1 (MQ=255)
                                                                                          cAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCCCAACAATAACAACAGACTGGAg                                                             >  1:390410/1‑150 (MQ=255)
                                                                                          cAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAg                                                             >  2:1844125/1‑150 (MQ=255)
                                                                                           aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGc                                                            >  1:952050/1‑150 (MQ=255)
                                                                                           aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGc                                                            <  1:821561/150‑1 (MQ=255)
                                                                                            gAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCg                                                           <  1:205573/150‑1 (MQ=255)
                                                                                            gAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCg                                                           >  1:703365/1‑150 (MQ=255)
                                                                                                gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATg                                                       <  1:2027750/150‑1 (MQ=255)
                                                                                                         gtCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACtt                                              >  1:1321428/1‑150 (MQ=255)
                                                                                                            gggTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGAt                                           <  1:993321/150‑1 (MQ=255)
                                                                                                            gggTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGAt                                           >  2:269845/1‑150 (MQ=255)
                                                                                                                 tttGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACttt                                      <  1:1622837/150‑1 (MQ=255)
                                                                                                                   tGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                                    <  2:452555/150‑1 (MQ=255)
                                                                                                                   tGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                                    <  2:2058116/150‑1 (MQ=255)
                                                                                                                   tGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                                    <  2:961025/150‑1 (MQ=255)
                                                                                                                        tGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCaa                               >  2:2218464/1‑150 (MQ=255)
                                                                                                                         gcgcAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAAc                              >  1:962765/1‑150 (MQ=255)
                                                                                                                          cgcAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACa                             <  1:1932922/150‑1 (MQ=255)
                                                                                                                          cgcAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACa                             <  1:1337143/150‑1 (MQ=255)
                                                                                                                            cAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATg                           >  1:1745273/1‑150 (MQ=255)
                                                                                                                            cAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAAGAACGACAATACCAACAGACAGAAGCGAATGAGTAAACTTGATACTTTTATCCAACAtt                           >  2:2459745/1‑149 (MQ=255)
                                                                                                                                  tgttgGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaa                     >  2:1780785/1‑150 (MQ=255)
                                                                                                                                    ttgGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAAc                   <  2:858325/150‑1 (MQ=255)
                                                                                                                                    ttgGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAAc                   <  1:782054/150‑1 (MQ=255)
                                                                                                                                     tgGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACg                  >  2:700856/1‑150 (MQ=255)
                                                                                                                                     tgGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACg                  <  2:1644406/150‑1 (MQ=255)
                                                                                                                                         gCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACACCAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGt              >  1:610815/1‑150 (MQ=255)
                                                                                                                                              aCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCgg         <  1:1263928/150‑1 (MQ=255)
                                                                                                                                               cGTATCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagat           <  2:1125295‑M1/150‑144 (MQ=255)
                                                                                                                                               CGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTAATAAATCAAAACAATAACAACAGACTGAAGTGAATGAGTAAACTTGATACTTTTATACAACATGCTGTAAACGCTGTTCCGGt        <  2:1810413‑M1/150‑1 (MQ=255)
                                                                                                                                                gTATCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacccgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagatc          >  1:100736‑M1/1‑6 (MQ=255)
                                                                                                                                                GTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCGAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTc       >  2:732828‑M1/1‑150 (MQ=255)
                                                                                                                                                GTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTc       >  1:33877‑M1/1‑150 (MQ=255)
                                                                                                                                                 tATCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacccgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagatcc         >  2:1081094‑M1/1‑5 (MQ=255)
                                                                                                                                                 tATCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagatcc         <  1:2484291‑M1/150‑146 (MQ=255)
                                                                                                                                                 TATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCa      <  2:366808‑M1/150‑1 (MQ=255)
                                                                                                                                                   tCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagatcccc       >  1:494746‑M1/1‑3 (MQ=255)
                                                                                                                                                   TCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGt    >  1:2175182‑M1/1‑150 (MQ=255)
                                                                                                                                                    tG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGACAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTg   >  2:2404670‑M1/2‑150 (MQ=255)
                                                                                                                                                     G‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTgg  >  1:2234093‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                        
AGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGG  >  NC_000913/1463296‑1463594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.