| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,898,316 | T→C | 6.2% | intergenic (+20/‑111) | sdaA → / → pdeD | L‑serine deaminase I/putative c‑di‑GMP phosphodiesterase PdeD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,898,316 | 0 | T | C | 6.2% | 443.9 / 13.5 | 145 | intergenic (+20/‑111) | sdaA/pdeD | L‑serine deaminase I/putative c‑di‑GMP phosphodiesterase PdeD |
| Reads supporting (aligned to +/- strand): ref base T (74/62); new base C (2/7); total (76/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.60e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.14e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
CCGCACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTATCGTC > NC_000913/1898167‑1898463 | ccgcACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCt > 1:373866/1‑150 (MQ=255)ccgcACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCt < 2:2142176/150‑1 (MQ=255) cgcACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTg < 2:2419967/150‑1 (MQ=255) ccAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAAc < 1:628703/150‑1 (MQ=255) gTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGa > 1:2002175/1‑150 (MQ=255) cACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATgg < 1:705000/150‑1 (MQ=255) aCCGCGCGTCTCGCTGTATAATGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTTGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATggg < 2:855180/150‑1 (MQ=255) ccGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGc < 2:2231304/150‑1 (MQ=255) ccGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGc > 2:198066/1‑150 (MQ=255) cgcgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCg > 1:1137695/1‑150 (MQ=255) cgcgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCCGTTGCAGATGGGCg < 2:1347241/150‑1 (MQ=255) cgcgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCCGTTGCAGATGGGCg < 2:573505/150‑1 (MQ=255) cgcgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCCGTTGCAGATGGGCg < 1:330015/150‑1 (MQ=255) gcgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCCGTTGCAGATGGGCGa < 2:597089/150‑1 (MQ=255) cgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCCGTTGCAGATGGGCGag < 1:397953/150‑2 (MQ=255) cgcgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCCGTTGCAGATGGGCGag < 2:2335336/150‑2 (MQ=255) cgTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAAtt > 1:189000/1‑150 (MQ=255) gTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAAttt < 2:2262735/150‑1 (MQ=255) ctcGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTtat < 1:1802860/150‑1 (MQ=255) gCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATAcc > 1:1478246/1‑150 (MQ=255) gCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATAcc > 1:1734479/1‑150 (MQ=255) gCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATAcc < 1:1801319/150‑1 (MQ=255) aTAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCtt < 2:913751/150‑1 (MQ=255) tAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCttt > 1:2168087/1‑150 (MQ=255) ggTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCATGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTtctc > 1:801891/1‑150 (MQ=255) ggTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACCTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTtctc > 2:1360757/1‑150 (MQ=255) gTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCg < 1:2290546/150‑1 (MQ=255) cATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCCCGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTc > 2:204385/1‑150 (MQ=255) cATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTc > 2:2029005/1‑150 (MQ=255) gAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTctgct > 1:322309/1‑150 (MQ=255) aaaCGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTctgctg < 1:1563201/150‑1 (MQ=255) gTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATAtt > 1:2120593/1‑150 (MQ=255) gAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTcccc > 1:366854/1‑150 (MQ=255) aaaCCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCa < 1:2088429/150‑1 (MQ=255) aaaCCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCa > 1:1342891/1‑150 (MQ=255) ggTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTCCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTaca > 1:1496353/1‑150 (MQ=255) aTGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTg < 2:363181/150‑1 (MQ=255) tGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGt > 1:814488/1‑150 (MQ=255) tGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGt > 1:1661249/1‑150 (MQ=255) gAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGtt < 2:296135/150‑1 (MQ=255) aCGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGc > 1:218892/1‑150 (MQ=255) cGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCg < 2:1782623/150‑1 (MQ=255) cAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCa < 2:175323/150‑1 (MQ=255) cAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACAGTTGCGTCa > 1:2033767/1‑150 (MQ=255) aaTACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAgg < 1:261288/150‑1 (MQ=255) aaTACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAgg < 1:888256/150‑1 (MQ=255) aTACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGc < 1:1078197/150‑1 (MQ=255) aTACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGc < 1:1977962/150‑1 (MQ=255) tACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCg > 1:497194/1‑150 (MQ=255) ccGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGtt > 2:1522722/1‑150 (MQ=255) ccGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGtt < 2:1233073/150‑1 (MQ=255) cgcgAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGttt > 2:1020263/1‑150 (MQ=255) gcgAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTg > 1:566848/1‑150 (MQ=255) gcgAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTg > 2:1825840/1‑150 (MQ=255) aaCCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGc < 1:600289/150‑1 (MQ=255) ccTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCa > 2:2438653/1‑150 (MQ=255) cTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCAt < 2:1647749/150‑1 (MQ=255) ggtggtCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTa > 1:2292214/1‑150 (MQ=255) tggtCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACa > 2:1290144/1‑150 (MQ=255) ggtCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAg < 1:1847463/150‑1 (MQ=255) tCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAggg > 1:1057497/1‑150 (MQ=255) tGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTg > 2:1846354/1‑150 (MQ=255) ggCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTgg > 2:534254/1‑150 (MQ=255) cAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGcc < 1:1020263/150‑1 (MQ=255) cAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGcc > 1:1134583/1‑150 (MQ=255) cAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGcc > 1:862433/1‑150 (MQ=255) cAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGcc < 2:1226047/150‑1 (MQ=255) aaTCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCATCGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGccc < 2:696283/150‑1 (MQ=255) aaTCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGccc > 2:2410071/1‑150 (MQ=255) aTCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCg > 2:78145/1‑150 (MQ=255) aaaGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCAt > 2:2363538/1‑150 (MQ=255) aaGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATg > 2:2339904/1‑150 (MQ=255) gTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGCCGCCATACGCTTACAGGGTGGCCCGCATGCa > 2:2076083/1‑150 (MQ=255) aGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCaaaaa > 1:185775/1‑150 (MQ=255) aGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCaaaaa < 2:899798/150‑1 (MQ=255) gtgtGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAg < 2:1758585/150‑1 (MQ=255) tgtgACTAATACTTCTTACTCGCCCATCTGCAACGGCTGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGc < 2:314156/150‑1 (MQ=255) tgtgACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGc < 1:2379100/150‑1 (MQ=255) gACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGcaca > 2:2064675/1‑150 (MQ=255) aCTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCAGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACaa > 2:1713372/1‑150 (MQ=255) tACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGAt < 2:1894439/150‑1 (MQ=255) tACTTCTTACTCGACCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCAACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATAAGCTTAAAGGGTGGCCCGCATGCAAAAAGCACAACGGAt > 2:1496103/1‑150 (MQ=255) aCTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATc < 2:2438017/150‑1 (MQ=255) cttcttACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCa < 1:1251764/150‑1 (MQ=255) ttcttACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCAt < 1:1277688/150‑1 (MQ=255) ttcttACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCAt > 1:975888/1‑150 (MQ=255) tcttACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCAtt > 2:1378871/1‑150 (MQ=255) tcttACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATAATCCCAAATACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCAtt > 1:1637694/1‑150 (MQ=255) cttACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTa < 1:1621434/150‑1 (MQ=255) attCGCCCATCCGTTGCAGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTaaaa > 1:1752151/3‑150 (MQ=255) cTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAAc > 2:131678/1‑150 (MQ=255) cTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAAc < 1:2410071/150‑1 (MQ=255) tCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAAcc < 1:1526542/150‑1 (MQ=255) cGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAAccg > 2:675319/1‑149 (MQ=255) cGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCt > 2:1776457/1‑150 (MQ=255) cGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATACTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCt > 2:22903/1‑150 (MQ=255) cccATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTAt > 1:855040/1‑150 (MQ=255) cccATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTAt > 2:1981840/1‑150 (MQ=255) ccATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTAtc > 1:1522291/1‑150 (MQ=255) cATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTAtcg < 2:1459649/150‑1 (MQ=255) | CCGCACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAATACTTCTTACTCGCCCATCTGCAACGGATGGGCGAATTTATACCCGCTTTCTCGTCTGCTGTAATATTCCCCACTACACTTCCACTGTTGCGTCAGGCGTTTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTATCGTC > NC_000913/1898167‑1898463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |