| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,681,967 | T→C | 6.6% | Y260C (TAC→TGC) | yphG ← | DUF5107 domain‑containing protein YphG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,681,967 | 0 | T | C | 6.6% | 501.5 / 17.2 | 166 | Y260C (TAC→TGC) | yphG | DUF5107 domain‑containing protein YphG |
| Reads supporting (aligned to +/- strand): ref base T (74/81); new base C (9/2); total (83/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.68e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
Only 100 of 168 total aligned reads displayed.
GGCCGTTATTGTCGGTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCC > NC_000913/2681818‑2682116 | ccGTTATTGTCGGTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTAc > 1:470393/1‑150 (MQ=255) tATTGTCGGTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCg > 1:2299188/1‑150 (MQ=255) tGTCGGTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGAGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGAtt > 1:329422/1‑150 (MQ=255) tCGGTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGAtttt > 2:1656103/1‑150 (MQ=255) ggTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTTTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑Tc < 1:1905554/150‑1 (MQ=255) ggTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑Tc < 1:1975836/150‑1 (MQ=255) ggTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑Tc > 2:1533737/1‑150 (MQ=255) ggTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑Tc > 1:637079/1‑150 (MQ=255) ggTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑Tc > 2:207256/1‑150 (MQ=255) gTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCg < 2:1532166/150‑1 (MQ=255) tCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCgg < 2:1021035/150‑1 (MQ=255) tCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGCAGTACGAttttgtcg < 1:2030372/150‑5 (MQ=255) cAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTTCAATGTTTTTTACCTGGCTCAATATTGTTGTTGTCATCTTTCATCAAACTGCCATCTTGATGGTGATACGACGTGCCGA‑AAAATCGCAGTACGATTTTGTCGGc < 2:2385068/150‑1 (MQ=255) ctctTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCCGCACACCGCCATCTTCATCGTGACACCCCGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCata > 2:1243236/1‑150 (MQ=255) ctctTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCata > 2:2126193/1‑150 (MQ=255) ctctTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCata > 1:2393013/1‑150 (MQ=255) ctTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCatata > 1:2478906/1‑150 (MQ=255) tATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATg < 1:1624981/150‑1 (MQ=255) aTCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGa < 1:1242885/150‑1 (MQ=255) aTCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGa < 2:1730727/150‑1 (MQ=255) aTCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGa < 1:2194546/150‑1 (MQ=255) aTCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGa > 1:1743641/1‑150 (MQ=255) cccACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAgg < 2:1886179/150‑1 (MQ=255) cccACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAgg < 2:1561318/150‑1 (MQ=255) ccACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGt < 1:425916/150‑1 (MQ=255) ccACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGt < 1:1470107/150‑1 (MQ=255) cACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGtt < 1:1824110/150‑1 (MQ=255) cGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTgg < 1:141074/150‑1 (MQ=255) ccTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGaa < 1:133105/150‑1 (MQ=255) cTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAAc < 2:959907/150‑1 (MQ=255) ggCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAg > 2:1487030/1‑150 (MQ=255) ggCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTCCGATTTT‑TCGGCCATATATTAGGTTGGAACAg > 2:434212/1‑150 (MQ=255) cgCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGCTGGTTGGCAACGTCCAGC‑AACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGATGTTGGAACAgg < 2:385202/149‑1 (MQ=255) gCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATTTTTACACCACGCGGAGAAAAAATCGTACTTCGATTTT‑TCTGCCATATATTAGTTTTGAACAgg < 2:597530/150‑1 (MQ=255) gCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAgg > 1:48346/1‑150 (MQ=255) gCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAgg > 2:1108112/1‑150 (MQ=255) cAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATCGAGGTTGGCAACGTGCAGCAAACCTCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTAATGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGca > 1:1068167/1‑150 (MQ=255) cAAATTCACTGTCTCCCCAACTCAACTGTTTTTTACATGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAAAAGCca > 2:275294/1‑150 (MQ=255) tCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGTGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACAttt < 1:1010827/150‑1 (MQ=255) cTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTta > 1:192713/1‑150 (MQ=255) cTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTta < 1:1548614/150‑1 (MQ=255) cTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACAACACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTta < 1:762996/150‑1 (MQ=255) atgttTCCACAACTACAATGTTTTTTAACTGGCTCAATATTGTGGTTTTAAACTTTCAGAAAACCTCCATCTTCATCTTGACACCACGCGCAGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCAAATTTTta < 2:1462598/149‑1 (MQ=255) gtgtCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTtata > 2:1793817/1‑150 (MQ=255) ccccAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCga > 2:479535/1‑150 (MQ=255) ccAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCgaga < 2:2370024/150‑1 (MQ=255) tCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGt < 2:1233045/150‑1 (MQ=255) tCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGt > 2:1678506/1‑150 (MQ=255) ccACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACGGGCACATTTTTATAGCGAGAAATGTc < 2:557833/150‑1 (MQ=255) cTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCAc < 1:973837/150‑1 (MQ=255) tttACCTGGCGCAATCTGGGGGTTGGCAACGTGCAGCAAACCGGCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAAGAGGCAGATTTTTATAGCGAGAAATGTCCACTCCAGc < 2:1463075/150‑1 (MQ=255) tACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCgg < 2:910832/150‑1 (MQ=255) ccTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGag < 1:742811/150‑1 (MQ=255) ccTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGag > 1:2054715/1‑150 (MQ=255) ggCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGagtag > 2:775650/1‑150 (MQ=255) gcgcAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGagtagt < 1:2241855/150‑1 (MQ=255) gcgcAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGAGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGagtaga > 1:1146067/1‑149 (MQ=255) cAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCTACTCCAGCGGAGTAGTCCa < 2:868757/150‑1 (MQ=255) aaTATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCAc > 1:2452754/1‑150 (MQ=255) tggtggTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTg < 1:1011510/150‑1 (MQ=255) ggtggtTGGCAACGTGCAGCAAACCTCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgt < 2:805743/150‑1 (MQ=255) ggtggtTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgt < 1:832297/150‑1 (MQ=255) ggtggtTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgt < 1:307462/150‑1 (MQ=255) gtggtTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgta < 1:380618/150‑1 (MQ=255) gtggtTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgta < 2:37727/150‑1 (MQ=255) ggtTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgtagt > 2:2341900/1‑150 (MQ=255) ggtTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTgtagt < 1:2481274/150‑1 (MQ=255) ggCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGt > 1:529693/1‑150 (MQ=255) cAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGc > 1:2447875/1‑150 (MQ=255) aaCGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGcc > 1:1985950/1‑150 (MQ=255) tGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTa > 2:1069790/1‑150 (MQ=255) agcaAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCg < 1:2475212/150‑1 (MQ=255) aCCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATggg < 1:1108112/150‑1 (MQ=255) ccGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATgggg < 2:2299188/150‑1 (MQ=255) ccGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATgggg > 1:1418115/1‑150 (MQ=255) gCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGaa > 1:2149299/1‑150 (MQ=255) ccATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGaaa > 2:1897206/1‑150 (MQ=255) cATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAg < 1:55531/150‑1 (MQ=255) tCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCg > 2:1141217/1‑150 (MQ=255) ttCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAATGCCGGTAGCGATGGGGAAAGCGga > 2:666691/1‑150 (MQ=255) tCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGgag < 2:1959284/150‑1 (MQ=255) tCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGgag < 1:1815073/150‑1 (MQ=255) tCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGgag < 2:2456595/150‑1 (MQ=255) aTCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGAc < 2:1180781/150‑1 (MQ=255) cGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACgg > 1:907069/1‑150 (MQ=255) tGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGcc > 2:1369272/1‑150 (MQ=255) acacCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCg < 1:2334133/150‑1 (MQ=255) ccacGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGttt > 1:1391919/1‑150 (MQ=255) cgcgCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGcc < 1:1100102/150‑1 (MQ=255) gcgcCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCg < 1:689860/150‑1 (MQ=255) cgcCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGt < 1:319960/150‑1 (MQ=255) gcCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTg < 1:1487030/150‑1 (MQ=255) gccgaaaaaTCGCAGTACGATTTTGTCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTg > 1:1582826/6‑150 (MQ=255) gccgaaaaaTCGCAGTACGATTTTGTCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTg > 2:615838/6‑150 (MQ=255) gccgaaaaaTCGCAGTACGATTTTGTCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTg > 1:1282198/6‑150 (MQ=255) ccGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGa < 1:1793817/150‑1 (MQ=255) ccgaaaaaTCGCAGTACGATTTTGTCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGa > 2:2459818/5‑150 (MQ=255) ccgaaaaaTCGCAGTACGATTTTGTCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGa > 1:88628/5‑150 (MQ=255) aCAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCa < 1:2353332/150‑1 (MQ=255) cAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCaa < 1:368007/150‑1 (MQ=255) | GGCCGTTATTGTCGGTCAGACTCTTATCCCACGCCTGGCCAAATTCACTGTGTCCCCAACTCCACTGTTTTTTACCTGGCGCAATATGGTGGTTGGCAACGTGCAGCAAACCGCCATCTTCATCGTGACACCACGCGCCGACAAAATCGTACTGCGATTTT‑TCGGCCATATATGAGGTTGGAACAGGCACATTTTTATAGCGAGAAATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCC > NC_000913/2681818‑2682116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |