| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,770,309 | G→A | 5.6% | V203I (GTT→ATT) ‡ | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,770,309 | 0 | G | A | 5.6% | 506.5 / 11.7 | 160 | V203I (GTT→ATT) ‡ | yfjR | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (74/76); new base A (4/5); total (78/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.64e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
AGCTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTAT > NC_000913/2770161‑2770455 | aGCTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGt < 2:2197352/150‑1 (MQ=255)aGCTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCAATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGt < 2:2332023/150‑1 (MQ=255) cTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTg < 2:2075982/150‑1 (MQ=255) cTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTg < 1:1900889/150‑1 (MQ=255) cTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTg < 2:641066/150‑1 (MQ=255) tCCCTGCCGGTTAGTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACCGTCTGTGTCGCCTGGTTGa < 2:497117/150‑1 (MQ=255) cccTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGaa > 2:1454819/1‑150 (MQ=255) ccTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAg < 2:1974361/150‑1 (MQ=255) tGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACAGTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGAc < 2:1616249/150‑1 (MQ=255) ggTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCgg < 1:903800/150‑1 (MQ=255) tACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCTGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCt < 2:1854539/150‑1 (MQ=255) aCTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCtt < 2:234661/150‑1 (MQ=255) tCATCCACCAGCAGACCTGGTAGCTGGGGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttca < 1:1622751/150‑1 (MQ=255) cATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttcat > 1:1118062/1‑150 (MQ=255) cATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttcat > 1:2079467/1‑150 (MQ=255) cATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTAGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttcat > 2:1261416/1‑150 (MQ=255) aTCCACCACCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCGGGTCttcaac < 1:1672312/150‑3 (MQ=255) tCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttcattc < 1:1265788/150‑1 (MQ=255) caccaGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAg > 1:2132311/1‑150 (MQ=255) accaGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAgg > 2:1574093/1‑150 (MQ=255) accaGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAgg < 2:559750/150‑1 (MQ=255) ccaGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGc < 1:271415/150‑1 (MQ=255) ccaGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGc < 1:609662/150‑1 (MQ=255) ccaGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTAGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAGGc < 1:1021250/150‑1 (MQ=255) cagcagACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGcc < 1:2167800/150‑1 (MQ=255) gcagACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAGGcgac < 2:1698802/150‑4 (MQ=255) gcagACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAGGcgac < 2:173396/150‑4 (MQ=255) gACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAcc > 1:1968450/1‑150 (MQ=255) aCCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCGATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAccc < 1:1113763/150‑1 (MQ=255) ccTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCAGGTCTTCATTCAGGCCTTAcccc > 2:753018/1‑150 (MQ=255) ggTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑tt > 1:1050800/1‑150 (MQ=255) ggTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑tt > 1:1310871/1‑150 (MQ=255) ggTATCTGCTGACTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTAAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACACGGTCTTCATTCAGGCCTTACCCCA‑tt > 2:1536786/1‑150 (MQ=255) tATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑tttt > 1:2282477/1‑150 (MQ=255) cTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGc > 2:1700418/1‑150 (MQ=255) ggtggCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCtt < 2:1367379/150‑1 (MQ=255) ggtggCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCtt < 1:335261/150‑1 (MQ=255) ggtggCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCtt < 2:2113341/150‑1 (MQ=255) ggtggCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCtt > 2:400323/1‑150 (MQ=255) gtggCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCttt > 1:1368909/1‑150 (MQ=255) ggCTGAACCCGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTAt > 2:1728543/1‑150 (MQ=255) ggCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTAt > 2:544543/1‑150 (MQ=255) gAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAg > 1:2459613/1‑150 (MQ=255) gAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAg < 1:1187183/150‑1 (MQ=255) aaCACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGc < 2:2265093/150‑1 (MQ=255) acacGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCa < 1:280610/150‑1 (MQ=255) cGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCGTTACCCCA‑TTTTCGCTTTATCCAGCATTc > 2:289306/1‑150 (MQ=255) ggCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGc > 2:1904189/1‑150 (MQ=255) gCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCt > 2:2174774/1‑150 (MQ=255) cATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCtt < 2:196703/150‑1 (MQ=255) tatCGCGGTATTTACTCTTGATGATATCCATCTGATTCAGCCTTTGCAGGTGACTTTTCGCCGCAATGAAAGTCTTTGTAGCCTTTTTGAAGACCATGTCTTCATTAAGGTCTTACCCCA‑TTTTCGCTTTATCCTTCATTCACTTCTTAc < 2:1420685/150‑1 (MQ=255) tatCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTAc < 1:1624236/150‑1 (MQ=255) ccGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTg < 2:2212155/150‑1 (MQ=255) aTTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTc > 2:1222290/1‑150 (MQ=255) ttCACACTTGATGAAATCCATCTGATTCATCCTTTGCAGGAGACTTTTCGCAGAAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCg < 2:1758322/150‑1 (MQ=255) ttCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCg < 1:1439316/150‑1 (MQ=255) acacTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGcc < 2:183154/150‑1 (MQ=255) cacTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCg > 2:585142/1‑150 (MQ=255) cacTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCg > 1:1457899/1‑150 (MQ=255) cacTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCg < 2:213616/150‑1 (MQ=255) tgatgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAg > 1:1501503/1‑150 (MQ=255) tgatgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAg > 1:2121416/1‑150 (MQ=255) gatgaAATCCATCTGATTCACCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGGCTGCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TGCCGGCCGACAGc < 2:1308065/150‑1 (MQ=255) gaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTATGTTTG‑TTCCGGCCGACAGCCCa > 2:1154985/1‑150 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGaa > 1:2205382/1‑150 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGaa > 2:503811/1‑150 (MQ=255) atatGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAAt > 2:79625/4‑150 (MQ=255) aTCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAAt > 2:2057060/1‑150 (MQ=255) tCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATa > 1:2253951/1‑150 (MQ=255) tGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAgc > 1:2074955/1‑150 (MQ=255) ttCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCCCTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCa < 1:1249878/150‑1 (MQ=255) ttCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCa > 1:776992/1‑150 (MQ=255) aGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGc > 1:233374/1‑150 (MQ=255) tttGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCgttg < 2:2459613/150‑1 (MQ=255) tttGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCgttg < 1:1574093/150‑1 (MQ=255) gCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTa > 2:881871/1‑150 (MQ=255) gCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTa > 1:1818762/1‑150 (MQ=255) gtagaCTTTTCGCAGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGACCACCGGAATAGCGCAGGCGTTGTTATCa > 1:1758168/3‑150 (MQ=255) gaCTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAAcc > 1:1908677/1‑150 (MQ=255) aCTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAAccc < 2:2079467/150‑1 (MQ=255) ttttCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCgg < 1:526484/150‑1 (MQ=255) tgccgtAATTACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAAc < 2:1050800/149‑1 (MQ=255) gccgcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCATCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCTGAATAGCGCAGGCGTTGTTATCAACCCGGCAACa < 2:1634405/150‑1 (MQ=255) gccgcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACa < 2:1305685/150‑1 (MQ=255) gcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATgg < 1:1454819/150‑1 (MQ=255) cAATGAGAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATgga < 1:140849/150‑1 (MQ=255) cAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATgga > 1:976794/1‑150 (MQ=255) cAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATgga < 1:609334/150‑1 (MQ=255) aTGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATggagg < 1:79625/150‑1 (MQ=255) aGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGAAGGCGTTGTTATCAACCCGGCAACATGGAGGAGccc > 2:1578195/1‑150 (MQ=255) gTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCa > 1:379926/1‑150 (MQ=255) gTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCa > 1:819984/1‑150 (MQ=255) gtCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGccc > 1:1595076/1‑150 (MQ=255) ggCCTGAATGAAGACCGGGTCTTCAACCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGt > 1:1244630/2‑150 (MQ=255) cGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGt > 2:631025/1‑150 (MQ=255) cGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGt > 2:2064347/1‑150 (MQ=255) ccTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTa > 2:1085084/1‑150 (MQ=255) cTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTAt > 2:1639366/1‑150 (MQ=255) cTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTAt < 2:1368909/150‑1 (MQ=255) cTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCACCATGCACT‑CGTACGTTTGTTTCCGCCCGCCAGCCCCCCGGAATAGCCAAGCCGTTGTTATCAACCCGGCACATTGGAGGACCCATGTGCCGGtttt > 2:1344331/1‑148 (MQ=255) | AGCTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCA‑TTTTCGCTTTATCCAGCATTCACTGCTTACGTTTG‑TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTAT > NC_000913/2770161‑2770455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |