| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,066,326 | G→A | 6.1% | A283V (GCC→GTC) | ygfI ← | putative LysR‑type DNA‑binding transcriptional regulator YgfI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,066,326 | 0 | G | A | 6.1% | 511.1 / 15.2 | 163 | A283V (GCC→GTC) | ygfI | putative LysR‑type DNA‑binding transcriptional regulator YgfI |
| Reads supporting (aligned to +/- strand): ref base G (88/65); new base A (4/6); total (92/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
ATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGG > NC_000913/3066177‑3066473 | aTCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTgg < 2:2306887/150‑1 (MQ=255) cGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGCATATTGCTGAAG‑ATCGTGACg < 1:353141/150‑1 (MQ=38) gCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGATGCTTCAGCATATTGCTGAAG‑ATCGTGACgg < 1:116882/150‑1 (MQ=38) gCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCgg < 2:337282/150‑1 (MQ=255) gCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGCATATTGCTGAAG‑ATCGTGACgg < 2:2108032/150‑1 (MQ=38) cTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATaa > 2:31277/1‑150 (MQ=255) tGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAAc > 1:1193898/1‑150 (MQ=255) tGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAAc < 2:2196931/150‑1 (MQ=255) ggAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGCATATTGCTGAAG‑ATCGTGACgggacgagt < 1:1904540/150‑8 (MQ=37) aaaaTGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACgat < 1:1739470/150‑1 (MQ=255) aaaaTGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACgat > 1:884534/1‑150 (MQ=255) aaaTGCGCCTTGCGGACATATTCACCACGATCTTAGCCACGTATTCTACTTACACCGTAATTTAATTGCAACCGGCTCTATGCTGGGTTAATGACTAGTCAAGTCACGAT‑CTTCATCAATATGCTGAAGCATCTTGGCGGTATAACgatg < 2:391439/150‑1 (MQ=255) aaaTGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACgatg < 2:490582/150‑1 (MQ=255) aTGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACgatgat > 1:171071/1‑150 (MQ=255) ggcCTGGCGGACATATTCACGACGATCTTAGCGACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCAGGAT‑CTTCAGCAATATGCTTAAGCATGGTGGCGGTATTACGATGATTTc < 2:1967215/149‑1 (MQ=255) cTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa > 1:2242112/1‑150 (MQ=255) cTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa < 1:1762787/150‑1 (MQ=255) cTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa < 2:2490486/150‑1 (MQ=255) tGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGAt < 1:1733850/150‑1 (MQ=255) ggACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa < 1:1419485/150‑1 (MQ=255) cATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATaa > 1:1036375/1‑150 (MQ=255) cATATTCACCACGATCTTAGCCAAGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATaa < 1:2429368/150‑1 (MQ=255) tatTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAg > 1:2456379/1‑150 (MQ=255) tatTCACAACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACAGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAg > 2:1941719/1‑150 (MQ=255) aatCACCAAGATCTTAGCCAAGTCTTCTACTTACACCGTAAATTAATTGCAACCGGCTCGATGCTAGGTAAATGACTCGTACATTCAATAT‑CTTCAGCAATATGCTGAAGCAACGAGGCGGTATAACCATGAATTCTGATTGAATAAAGa > 2:1618240/3‑150 (MQ=255) caccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATTACGATGATTTCTGATTGAATAAAGatat > 2:2378263/1‑150 (MQ=255) aaccacGATCTTATCCACTTCTTCGACTTAAACCGTAATTTAATTTCAATCGGCTCGATGCGGGGTTAATGATTCTGCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGatat < 2:1269778/149‑1 (MQ=255) ccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTc > 2:1089933/1‑150 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTcc < 2:2155175/150‑1 (MQ=255) acGATCTTAGCCACGTCTTCGACTTACACCGTAATTTATTTGCAACCGGCTCGATGCTGGGTTAATGAGTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCt < 1:1536028/150‑1 (MQ=255) acGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCt > 1:592909/1‑150 (MQ=255) aTCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCa < 2:543863/150‑1 (MQ=255) aTCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCa > 1:1071364/1‑150 (MQ=255) gCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACa > 1:1769741/1‑150 (MQ=255) tCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGcc > 2:1076854/1‑150 (MQ=255) cTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCt > 1:1530884/1‑150 (MQ=255) ttCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCtg < 2:1223342/150‑1 (MQ=255) cTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCgg > 2:617464/1‑150 (MQ=255) ttACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGt < 1:500207/150‑1 (MQ=255) tACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTg < 2:1729600/150‑1 (MQ=255) cacCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCa > 2:886200/1‑150 (MQ=255) ccGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATc > 1:1726583/1‑150 (MQ=255) ccGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATc > 2:1987824/1‑150 (MQ=255) ccGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATc > 1:2055015/1‑150 (MQ=255) ccGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATc > 1:1195455/1‑150 (MQ=255) gTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCaa > 2:2274240/1‑150 (MQ=255) aatttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCaaaa < 1:120984/150‑1 (MQ=255) atttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGAt > 1:42644/1‑100 (MQ=255) tttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAata > 1:1759350/1‑150 (MQ=255) tttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAata > 1:1385121/1‑150 (MQ=255) tttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCACGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTACTGCATATACATCGGCCTGAGCGGTGCATCAAAata > 2:2062985/1‑150 (MQ=255) attGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTc > 2:1534888/1‑150 (MQ=255) attGCAACCGACTCGATGATGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGAATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATAttta > 2:1195985/1‑149 (MQ=255) tGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAg > 1:1672419/1‑150 (MQ=255) gCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGc > 1:39869/1‑150 (MQ=255) aCCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGtt > 1:2486882/1‑150 (MQ=255) ccGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTg < 2:1515370/150‑1 (MQ=255) ccGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTg < 2:1697031/150‑1 (MQ=255) ggCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGAGTTGcc > 2:2116978/1‑150 (MQ=255) gCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCg > 1:2054529/1‑150 (MQ=255) cGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGAt < 1:1987198/150‑1 (MQ=255) gATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGAtt > 2:1752963/1‑150 (MQ=255) aTGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTc > 2:1644384/1‑150 (MQ=255) gCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCAc < 2:2459643/150‑1 (MQ=255) cTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGAt > 2:1579584/1‑145 (MQ=255) cTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGAt < 1:1579584/145‑1 (MQ=255) cTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCAcc < 2:2464695/150‑1 (MQ=255) ggTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGt > 1:832729/1‑150 (MQ=255) tAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGc < 2:1465025/150‑1 (MQ=255) aaTGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGcc > 1:1034862/1‑150 (MQ=255) tGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAg > 2:1716418/1‑150 (MQ=255) cGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTACTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCaaa > 2:2363933/1‑150 (MQ=255) cGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTATGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGAGTCACCAGTCGCCAGGCaaa > 2:2432690/1‑150 (MQ=255) ccGCCACGATGCTTCAGCATATTGCTGAAG‑ATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGc > 1:161417/1‑150 (MQ=38) cgccACGATGCTTCAGCATATTGCTGAAG‑ATCGTGACGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCg > 2:659221/4‑150 (MQ=38) cGTCACGAT‑CTTCATCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCg < 2:1193898/150‑1 (MQ=255) cGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCg > 2:605969/1‑150 (MQ=255) gTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg < 1:605969/150‑1 (MQ=255) tCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATGCATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCggg < 1:820954/150‑1 (MQ=255) tCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCggg < 1:1089933/150‑1 (MQ=255) acgatgcTTCAGCATATTGCTGAAG‑ATCGTGACGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGAt > 1:1523614/7‑150 (MQ=255) cgatgcTTCAGCATATTGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGAt > 2:861791/6‑150 (MQ=255) cgatgcTTCAGCATATTGCTGAAG‑ATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATc > 1:23438/6‑150 (MQ=255) gAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCa < 2:2318514/150‑1 (MQ=255) aT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCAc < 1:1941719/150‑1 (MQ=255) cTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCg < 2:592909/150‑1 (MQ=255) ttCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGt > 1:774858/1‑150 (MQ=255) cAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCa < 2:826766/150‑1 (MQ=255) cAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCa < 1:1383297/150‑1 (MQ=255) atatGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGaaaa < 2:1377847/150‑1 (MQ=255) atatGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGaaaa < 1:617464/150‑1 (MQ=255) gCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTc < 2:1071364/150‑1 (MQ=255) gCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTc > 2:1769613/1‑150 (MQ=255) tGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCcg < 2:1810924/150‑1 (MQ=255) gAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTTCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCTGGATCACCGTCAGAAAATGTCcgc < 1:1618240/150‑1 (MQ=255) gAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCcgc < 1:234367/150‑1 (MQ=255) aaGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATAATCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTAACCAGTAGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCcgcc > 1:2408935/1‑149 (MQ=255) aTCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTcc > 1:1783601/1‑150 (MQ=255) aTCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTcc < 1:1564819/150‑1 (MQ=255) tGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACgg < 1:1646660/150‑1 (MQ=255) | ATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATATGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGG > NC_000913/3066177‑3066473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |