| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,270,195 | A→C | 11.7% | intergenic (+593/+21) | yhaC → / ← rnpB | uncharacterized protein YhaC/RNase P catalytic RNA component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,270,195 | 0 | A | C | 11.7% | 225.5 / 10.9 | 107 | intergenic (+593/+21) | yhaC/rnpB | uncharacterized protein YhaC/RNase P catalytic RNA component |
| Reads supporting (aligned to +/- strand): ref base A (61/32); new base C (9/4); total (71/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 107 total aligned reads displayed.
TCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTATTTGGCC > NC_000913/3270053‑3270343 | tCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTAAAGACTCGTAGAAAGTCAATCAAGATAATGCACCAACAAAAACAAAAACCCGCCGAA‑G‑Cgcgg > 2:1955070/1‑147 (MQ=11) ccACAAGCTCAAACCCGCCGTATCGGTTTATTACGTAAAGCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCTTCG‑G‑CGGGtttttgcttt < 1:1665954/150‑6 (MQ=11) ttacgtaaaaaCCCGCTTCGGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGAGTATTGTAAAGTCAATCAAAATAAAACACCAACAAAAACAAAAAACCGCCGAA‑C‑CGGGTTTTTACATaaa > 2:254255/7‑150 (MQ=2) aGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTGTGCCCCTGCAAAAGCAAAAACCCGCCGGA‑G‑CGGGTTTTTAAGTAAAtga > 1:2216969/1‑148 (MQ=255) gtaaaaaCCCGCTTCGGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCAGTCAGACCCAACAAAAACAAAAACCCGCAGAA‑G‑CGCCGTTTTACGTAAATCaa > 2:163578/3‑149 (MQ=11) cAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGTCAATCATAGTTCTGCGCCTACAAAAGCAAAAACCCGCAGAA‑G‑AGGGTTTTTTAGAAAATCacg > 2:1835586/1‑148 (MQ=11) cAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGTCATTCAACTTTCGGCACCTACAAAAGCAAAAACCCGCAGAA‑G‑CGGGTTTTTAAGTAAATCAgg > 2:933932/1‑150 (MQ=11) cccGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGTCAATCAAAATTAGACACCAACAAAAACAAAAACCCCCCTAA‑GACCGGTATTTACG‑AAATCAAGAGaaaa > 2:591221/1‑149 (MQ=2) cgccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATCATCTTTAAGCGCCAACAAAAGCAAAAACCCGCCGAA‑G‑AACGTTTTTAAGTAAATCAGGTGaaaatt > 2:1511106/1‑147 (MQ=11) cGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATATTTGTGCCCCGGCAAAAGCAAAAACCCGCCGAA‑G‑AGGGGTTTTAAGGAAATGAGGGGAAAATTGCCGATaa > 1:264766/1‑150 (MQ=11) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGCGTCGTGGAAAGTCAATCATAATTTGGCGCCTACAAAAGCAAAAACCCGCGGAAGG‑GGGGTTTTTAC‑TAAATGAGGGGAAAATTGCCGATGAGc > 2:293752/1‑150 (MQ=2) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTGGGGGAGAGGCATTCATGTTGGAGCGCCAGCAAAAGCAAAAACCCGCCGAA‑G‑GGCGTGGGTACGGTAATCAGGGGCAAATGACCGATAAGc > 2:2298216/1‑150 (MQ=2) tttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGCA‑G‑CGGGTTTTTACGTAAATCAGGTGTAACTGACCCATAAGCCggg > 1:1145350/1‑150 (MQ=255) tACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGTGGAAAGTCATTCATCATTGAGCCCCAACAAAAGCAAAAACCCGCCGAA‑G‑GGGGGTTTTACGTAAATCAGGAGAAAATGACCCATAATCCGGGtt > 1:1572645/1‑150 (MQ=11) tAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATCATAATTAAGCACCAACAAAACCAAAAACCCGCCGCA‑G‑CGCGGTTTTACGAAAATCAGGGGAAAATTCCCGATAAGCCGGGTTCAGt > 2:198240/1‑150 (MQ=14) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGCA‑G‑CGGGTTTTTACGTAAATCAGGTCCAACTGACCGATAAGCCGGGTTATGTCGTGGAc > 1:1349333/1‑150 (MQ=255) ggTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCTTGGACAGTCAATCAACATGGCCCGCCAACAAAAACAAAAACCCGCAGAA‑G‑CGCCGTGATACGTAAATCAGGTGAAACTGACCAAGAATCCCGGTTCTGTCggggcc > 2:1429242/1‑148 (MQ=9) gTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCAGCCCCTACAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTAAGTAAATCAGTTGAAACTGACCGATAAGCCGGGTTATGTCGTgggga > 2:1173472/1‑147 (MQ=14) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTAAATCATCATTCAGCCCCAACAAAAACAAAAACCCCCCGAA‑G‑ACCCATATTAACTAAATCAGCTGAAACTGACCCATAAGCCCGGTAATGTAGTGGACac > 2:2142991/1‑149 (MQ=2) cTGACCGTTTAGCCGCATTCTTTTGTGTTTAGCGGCGTGGACAGTCAGTCATCATTGTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt < 1:1834597/150‑1 (MQ=17) gACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGCA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAAAGtcattca > 1:1655021/1‑150 (MQ=255) ccGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑AGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATc > 2:1442392/1‑150 (MQ=255) ccGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattgatg > 1:2409521/1‑149 (MQ=255) ccGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCAACAAAAACAAAAACCCGCCGAA‑T‑CCGCTTTTTACGTAAATCAGGTGAAACTGACCGATAAACCAGGTTATGTAGTTGACAGtcaatcatg > 2:2060703/1‑149 (MQ=14) gATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTg < 1:1378405/104‑1 (MQ=35) aaGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGc > 1:416002/1‑150 (MQ=255) aaGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CCGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGc > 2:2064159/1‑150 (MQ=255) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattca > 2:698248/1‑142 (MQ=255) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattca < 1:698248/142‑1 (MQ=255) gCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGCA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa > 2:704427/1‑150 (MQ=255) gCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAACCTGCCCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGccc > 2:1351257/1‑149 (MQ=255) gCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa > 1:797669/1‑150 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCAGGGTTATGTAGTGGACAGTCATTCATCTAGGCCAGc > 2:1725478/1‑150 (MQ=255) ttcttaTGGGTTTTGTGGCGTTGTCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATc < 1:1325414/150‑1 (MQ=18) tctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGtt > 2:1231991/1‑114 (MQ=18) tctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGtt < 1:1231991/114‑1 (MQ=18) ctttTGGGTATAGCGTCGTGGACAGTCATCCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGc > 1:1338122/1‑150 (MQ=255) ggTATAGCGCCGTTGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAACAACCCTCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTg < 1:1172161/150‑1 (MQ=255) gTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTgg > 1:1396238/1‑150 (MQ=255) tctttgACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATTATGGGTTTTGTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagca < 2:248335/145‑1 (MQ=18) cgtGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagcag > 1:1852632/1‑150 (MQ=255) tGGACAGTCATTCATCTTTCTGCCCATCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGcc < 1:254255/150‑1 (MQ=255) ggACAGTCATTCATCTTTTTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATAGCTCACTGGCTCAAGCAGCCt > 1:646036/1‑150 (MQ=255) aGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACt < 2:699066/73‑1 (MQ=34) aGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTAccc > 2:1117627/1‑150 (MQ=255) tcattcatCTTTCATCCCCTCCAAAACCAAAAACCCGCCGAA‑T‑CTGGTTTTTACGTAAATCAGGTGAACCTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCgg < 1:295782/150‑1 (MQ=37) cattcatCTTTCTGCCCCTCCAAAAGCCACACGCCGCCGCA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCggg < 1:1429242/150‑1 (MQ=37) cattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCggg > 2:1633959/1‑150 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCggg > 1:25306/1‑150 (MQ=255) tctcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGt < 1:1786430/148‑1 (MQ=255) attcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTg < 2:524936/70‑1 (MQ=35) attcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTCACCGATAAGCAGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGt > 2:1547071/1‑150 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTc > 1:69267/1‑150 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTc > 1:260859/1‑150 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTc > 2:29245/1‑150 (MQ=255) catCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGt < 2:186145/97‑1 (MQ=255) catCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGt > 1:186145/1‑97 (MQ=255) catCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCa > 2:1708003/1‑150 (MQ=255) catCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCa > 2:1721710/1‑150 (MQ=255) catCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCa > 2:1052570/1‑150 (MQ=255) catCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCa > 1:975644/1‑150 (MQ=255) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAC‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAg < 1:1724131/150‑1 (MQ=255) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAg < 1:2060703/150‑1 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGt > 1:1357704/1‑150 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGt > 1:1366428/1‑150 (MQ=255) cTTTCTGACCATCGAAAAGCAAAAACCCGCAGAA‑G‑CTGGTTTTTACGTAAATCATGTGAATCTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTa < 2:1655021/150‑1 (MQ=37) gCCCCTCCAAAAGTAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAg > 1:864614/1‑104 (MQ=255) gCCCCTCCAAAAGTAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAg < 2:864614/104‑1 (MQ=255) gCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCggg < 1:949222/72‑1 (MQ=38) gCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGcc < 1:1719381/150‑1 (MQ=255) ccccTCCAAAAGAAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTTAATCTGACCGATAAGCGGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCg < 2:574412/150‑1 (MQ=255) cccTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGt > 1:2481593/1‑150 (MQ=255) cccTCCAAAAGAAACAACCCGCCGAA‑G‑CGGGTTTTTACGTAAACCACGGGCTCCTGACCGCTAAGGCGGCTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGt < 1:313864/150‑1 (MQ=37) ccAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCt > 2:1236138/1‑150 (MQ=255) cAAAATCAAAACCCCCCCCCA‑G‑CCTTTTTTTACGTACAGCCCCTGAACCTGACCGCTCTGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCtt < 1:1045506/150‑1 (MQ=255) aaaaccaaaaccCCGCCGAA‑G‑CGGGTTTTTAGGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTa < 1:277613/150‑1 (MQ=255) aaaaGTAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg < 1:849194/74‑1 (MQ=255) aaaaGTAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:849194/1‑74 (MQ=255) tacgtaaaaaCCCGCTTCG‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTAt > 2:28419/6‑150 (MQ=38) aaaTCACAAACCCGCCGCA‑C‑CGGGTTTTTACGTACATCAGGTCAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTAt < 1:1128023/150‑1 (MQ=39) aaaGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGCGCCGTACCTTAt < 1:2391706/150‑1 (MQ=255) aaGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATg > 1:580185/1‑150 (MQ=255) cgtaaaaaCCCGCTTCG‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGa > 2:2078909/4‑150 (MQ=39) cgtaaaaaCCCGCTTCG‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGAAAACGCTCACAGGCTCAAGCAGCCTACCCGGGATCAGTACGGGCCGTACCGTAAGa > 1:2276258/4‑150 (MQ=37) gCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGaa > 2:2333280/1‑150 (MQ=255) ataaaaaCCCGCTTCG‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTCATGaa > 1:406100/3‑150 (MQ=38) cAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAAc > 2:723114/1‑150 (MQ=255) ttaaaCCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAAcc < 1:1251549/148‑1 (MQ=255) aaaaaCCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAAcc < 1:591221/150‑1 (MQ=255) aaCCCGCAGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCt > 1:1657624/1‑150 (MQ=255) cccGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt < 1:2471036/57‑1 (MQ=255) cccGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTAt > 2:1826806/1‑150 (MQ=255) cccGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTAt > 2:1229164/1‑150 (MQ=255) cccGCCGAA‑G‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCt > 2:2471036/1‑57 (MQ=255) ccgccgAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTAtt < 1:1276780/150‑1 (MQ=255) ccgccgAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTAtt > 1:894627/1‑150 (MQ=255) cgccgAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTAttt > 1:1723576/1‑150 (MQ=255) cgccgAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTAttt > 2:698794/1‑150 (MQ=255) ccgAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTATTTgg < 1:204298/150‑1 (MQ=255) gAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTATTTGGcc < 1:606135/150‑1 (MQ=255) | TCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAA‑G‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGCCGTACCTTATGAACCCCTATTTGGCC > NC_000913/3270053‑3270343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |