| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 51,908 | C→G | 5.7% | E175Q (GAA→CAA) ‡ | rsmA ← | 16S rRNA m(6)2A1518,m(6)2A1519 dimethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 51,908 | 0 | C | G | 5.7% | 527.2 / 14.7 | 156 | E175Q (GAA→CAA) ‡ | rsmA | 16S rRNA m(6)2A1518,m(6)2A1519 dimethyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (69/77); new base G (7/2); total (77/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.40e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.09e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GGTTTTACGACGCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAACAGA > NC_000913/51759‑52056 | ggTTTTACGACGCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTc > 1:1496115/1‑150 (MQ=255) ttttACGACGCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCa < 1:2485787/150‑1 (MQ=255) ttttACGACGCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCa > 2:2326258/1‑150 (MQ=255) cgacgCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTACCCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTAcc > 1:1620216/1‑150 (MQ=255) cgacgCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTAcc > 1:1876480/1‑150 (MQ=255) cgacgCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGAACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGCCTGACGGCGGTACTTCAAGTAcc > 2:882222/1‑150 (MQ=255) gacgCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCg < 1:1474129/150‑1 (MQ=255) acgCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTGGAAGTACCgc < 1:1411098/150‑2 (MQ=255) cgCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCggg > 2:723003/1‑150 (MQ=255) gCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGa < 2:587163/150‑1 (MQ=255) cTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGAt < 2:2223443/150‑1 (MQ=255) atGGTTAAAGGCTTCGGTGGTGATGCGGCGCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCTTGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTATAGGCTGACGGCGGTACTTCCAGTACCGGGAt < 2:856850/149‑1 (MQ=255) ggTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATca < 2:1630566/150‑1 (MQ=255) gTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATcac > 2:1315434/1‑150 (MQ=255) gTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATcac > 1:2440505/1‑150 (MQ=255) tAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACAt > 2:836982/1‑150 (MQ=255) aaaGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACAtt > 2:2041627/1‑150 (MQ=255) aaGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTg < 1:1278366/150‑1 (MQ=255) aaGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTg < 1:533076/150‑1 (MQ=255) ggCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCa > 1:746744/1‑150 (MQ=255) ggCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCa > 2:452559/1‑150 (MQ=255) cTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAAt > 1:1151600/1‑150 (MQ=255) gtggtgATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTAt > 1:661473/1‑150 (MQ=255) tgATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTg < 1:1741095/148‑1 (MQ=255) gATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTgcgc < 1:2081255/150‑1 (MQ=255) gATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTgcgc > 1:2327201/1‑150 (MQ=255) cTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACg < 2:1946068/150‑1 (MQ=255) aaCACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCtt < 1:1432196/150‑1 (MQ=255) aaCACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGCGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCtt > 2:1226507/1‑150 (MQ=255) cacacGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGTTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTaa > 1:2368984/1‑150 (MQ=255) cacacGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTaa > 1:1157401/1‑150 (MQ=255) cacGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATc < 2:148772/150‑1 (MQ=255) acGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTTACTTAGGTACTTCCAGTACCGGTATCATATTGCAATATTATTGCGTGATGACGATTAAtag < 2:112803/150‑3 (MQ=255) cGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGa < 1:1798574/150‑1 (MQ=255) gAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGAc < 1:1632637/150‑1 (MQ=255) gAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGAc < 2:1424317/150‑1 (MQ=255) aaCATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGAcc < 2:1496115/150‑1 (MQ=255) aCATCTTTAACCGGGTGAGGCATCGTTTCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTTGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCa < 1:692703/150‑1 (MQ=255) aTCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATa > 2:884729/1‑150 (MQ=255) cTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACg > 1:1209400/1‑150 (MQ=255) tAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCtt > 2:1457695/1‑150 (MQ=255) aaCCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCttt > 2:2460380/1‑150 (MQ=255) aCCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTg > 1:978949/1‑150 (MQ=255) aCCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTg > 2:2363334/1‑150 (MQ=255) gggTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTg > 1:2259026/1‑150 (MQ=255) tGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTc < 2:14275/150‑1 (MQ=255) gAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCg > 2:1904004/1‑150 (MQ=255) cATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTcc < 1:535133/150‑1 (MQ=255) cATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTcc < 1:762494/150‑1 (MQ=255) gTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCa > 2:1765616/1‑150 (MQ=255) tGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAAc > 2:2039845/1‑150 (MQ=255) tGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAAc > 1:214102/1‑150 (MQ=255) gCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAAcc < 1:271313/150‑1 (MQ=255) gCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTACAGTACCGGGATCACATTGCAATAGTATTGCGACATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAAca > 2:138037/1‑149 (MQ=255) tGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGa < 2:696123/150‑1 (MQ=255) gAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTTGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGAc < 1:559766/150‑1 (MQ=255) gAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGAc < 1:2480612/150‑1 (MQ=255) aGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACg > 1:2252040/1‑150 (MQ=255) aCCAGGCGCACGCAGGAGGACTCCAGTTTGGGAGGTGGTGTAAAGGAAGACGGCGGTCGGGCCAGTCCCGGGATCACATTGCCATAGTATTGCGCCATGACGCTTATTCGCCCATACGGTTTGCTGTTCGGTCCTGCAACCAGACTAtta > 2:2218314/1‑149 (MQ=255) ccAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTca < 1:52459/150‑1 (MQ=255) ccAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTca < 1:415433/150‑1 (MQ=255) cAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTcac < 1:881846/150‑1 (MQ=255) aGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTcacc < 1:1467287/150‑1 (MQ=255) cgacgGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCtt > 2:2399439/1‑150 (MQ=255) cgacgGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCtt > 1:2039710/1‑150 (MQ=255) acgGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCtttt < 2:1130679/150‑1 (MQ=255) gcggAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGc > 1:82875/1‑150 (MQ=255) gttaaTCCACTTTGTGTGGTGGTGTAAAGGCTGAAGGCGGTACTTCCAGTAACGGGATCACATTGCAATAGTATTGCTCCATGACGCTTAATCGACCATACGCTTTGCTTTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCa < 2:1620216/147‑1 (MQ=255) cggAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGGTTCACCACCTCTTTTTGCa < 2:303367/150‑1 (MQ=255) cggAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCa < 1:2326258/150‑1 (MQ=255) cggAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCa < 2:612686/150‑1 (MQ=255) gAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAAc > 2:1742472/1‑150 (MQ=255) tttGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAAAAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTg < 2:2456184/150‑1 (MQ=255) tGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCa > 1:1082711/1‑150 (MQ=255) ggtgTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCa > 1:2463214/1‑150 (MQ=255) tgtAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAAt < 1:1042066/150‑1 (MQ=255) tgtAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAAt > 1:520132/1‑150 (MQ=255) gtAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTGTTTGCAACATAAAGTGCATGTCGGCAATg > 2:1019473/1‑150 (MQ=255) aaaGGGTGACTGCGGTACTTCCAGTACCGGTATAACATTGCAATAGTATTGCGCAATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGc < 2:253849/150‑1 (MQ=255) ggCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATc > 1:114218/1‑150 (MQ=255) ggCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATc < 1:1969240/150‑1 (MQ=255) ggCTGACCGCCGTACTTCCAATACCGGGATCACATTGCAATAGTATTGCGCCAAGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATc > 2:2311691/1‑150 (MQ=255) gCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGACATGACGCTTAATCGACCATACGCTTTGATGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCa < 2:2440505/150‑1 (MQ=255) cttactgcggTACTTCCAGTAGGGGGATCAGATTGCAATAGTTTTGCGCCATTACGCTTAATCGTCGATACGGTTTGGTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAg < 2:2152445/144‑1 (MQ=255) cTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAg < 2:1736424/150‑1 (MQ=255) cTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAg > 1:2350289/1‑150 (MQ=255) tGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGt < 1:1315434/150‑1 (MQ=255) tGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGt < 2:776227/150‑1 (MQ=255) tcccggTACTGGAAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGtata > 2:972912/4‑150 (MQ=255) tcccggTACTGGAAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGtata > 1:1649873/4‑150 (MQ=255) tcccggTACTGGAAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGtata > 2:1190899/4‑150 (MQ=255) cccggTACTGGAAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAg > 1:2077864/3‑150 (MQ=255) gTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTaa > 2:661159/1‑150 (MQ=255) aCTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCa > 1:1138505/1‑121 (MQ=255) aCTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCa < 2:1138505/121‑1 (MQ=255) aCTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAAc < 1:390760/150‑1 (MQ=255) cTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAACa < 2:381955/150‑1 (MQ=255) cTTCAAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACTCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAACa < 1:882222/150‑1 (MQ=255) tCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAACAGa > 1:1921922/1‑150 (MQ=255) tCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAACAGa < 1:2399439/150‑1 (MQ=255) | GGTTTTACGACGCTGGTTAAAGGCTTCGGTGGTGATGCGGCTCAACACACGAACATCTTTAACCGGGTGAGGCATCGTTGCATGAGGAACCAGGCGCACGACGGCGGAATCCACTTTGGGTGGTGGTGTAAAGGCTGACGGCGGTACTTCCAGTACCGGGATCACATTGCAATAGTATTGCGCCATGACGCTTAATCGACCATACGCTTTGCTGTTCGGTCCTGCAACCAGACGATTCACCACCTCTTTTTGCAACATAAAGTGCATGTCGGCAATGGCATCAGTATAGCTAAACAGA > NC_000913/51759‑52056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |