| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,540,647 | G→C | 6.2% | R648R (CGC→CGG) | narZ ← | nitrate reductase Z subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,540,647 | 0 | G | C | 6.2% | 542.4 / 19.4 | 162 | R648R (CGC→CGG) | narZ | nitrate reductase Z subunit alpha |
| Reads supporting (aligned to +/- strand): ref base G (73/79); new base C (4/6); total (77/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.39e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
TGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGGCGCGGTGGTCGGTT > NC_000913/1540498‑1540796 | gttCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGgcgc > 1:1380637/1‑150 (MQ=255) gttCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGgcgc < 1:1496547/150‑1 (MQ=255) cGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGaa > 1:284871/1‑150 (MQ=255) cGCAGGCCATACGTAAATCGCCCGATTTCACCGCCTGCGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGaa > 2:558455/1‑150 (MQ=255) ggCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCAGTGGGGGATAATCCGGCCTTGTCCGCATCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATAAGTTCGGCGCCAACGta > 1:1633040/1‑149 (MQ=255) gCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTg > 2:141868/1‑150 (MQ=255) ccATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGa < 2:663551/150‑1 (MQ=255) ccATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGCGCCGAACGtatg < 1:2195615/150‑4 (MQ=255) aTACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATTCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGaaa < 1:860482/150‑1 (MQ=255) aTACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGaaa < 2:427027/150‑1 (MQ=255) aTACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGaaa < 2:1293129/150‑1 (MQ=255) aTACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGCGCCGAACGtatggg < 1:103018/150‑6 (MQ=255) aTACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGCGCCGAACGtatggg < 2:95433/150‑6 (MQ=255) aCGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAaatc > 2:1559730/1‑150 (MQ=255) aCGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAaatc > 2:1155506/1‑150 (MQ=255) tAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACTCCCCAGCTGCGTCGCATAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAaatcaat < 2:1527270/150‑1 (MQ=255) tAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAaatcaat < 1:1172312/150‑1 (MQ=255) aaaTCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAaatcaatc > 1:2213205/1‑150 (MQ=255) aaaTCGCCCGATTTCAGCGCCTGGGCGGTAAATTCCGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAaatcaatc > 1:413084/1‑150 (MQ=255) aaTCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAatcaatca < 2:517250/150‑1 (MQ=255) aaTCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAatcaatca < 2:1163745/150‑1 (MQ=255) aTCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAg < 2:2213205/150‑1 (MQ=255) tCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGa < 2:1246933/150‑1 (MQ=255) gCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATg > 1:54153/1‑150 (MQ=255) gCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATg > 2:432819/1‑150 (MQ=255) gCCCGATTTCAGCGCCTGGGCGATAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCCGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATg > 2:1095828/1‑150 (MQ=255) cccGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGa > 2:157316/1‑150 (MQ=255) tttCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCt > 1:1712673/1‑150 (MQ=255) cAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGta > 2:2336678/1‑150 (MQ=255) cAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGCCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGATGCGGCGCAGAAGGTCGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCAGta > 2:377345/1‑150 (MQ=255) aGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGtac < 2:201715/150‑1 (MQ=255) aGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGtac < 1:2058477/150‑1 (MQ=255) gcgcCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGtact < 2:216830/150‑1 (MQ=255) gcgcCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGtact > 2:650246/1‑150 (MQ=255) ccTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATACCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCAATACGTTAGGCGCGAAAGTTGAAATCAATAATATGACCGCTGtacttaa > 2:77056/1‑149 (MQ=255) gggCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTgg < 1:2165880/150‑1 (MQ=255) gggCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTgg < 1:1545760/150‑1 (MQ=255) cGGTAAATTCTGTGGGGTATAATCCGGCCTTGTCGGCTTCAGCTTTAATAACGCGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCCGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCAt > 2:1938929/1‑150 (MQ=255) ggTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATc > 1:911004/1‑150 (MQ=255) tgtgGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCgg < 1:6932/150‑1 (MQ=255) tgGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTg > 2:1880580/1‑150 (MQ=255) ggATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAg > 2:1101669/1‑150 (MQ=255) ggATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAg > 2:1137924/1‑150 (MQ=255) aaTCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAAc < 2:2081588/150‑1 (MQ=255) ccGGCCTTGTCGGCTTCAGCTTTAATCCCGAGTGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTcc > 2:1991935/1‑150 (MQ=255) ccGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTcc < 1:1800608/150‑1 (MQ=255) cGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAgaga > 1:2137920/1‑150 (MQ=255) cGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAgaga > 2:1704113/1‑150 (MQ=255) cAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACttttt < 1:1039783/150‑1 (MQ=255) cAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACttttt < 1:2485385/150‑1 (MQ=255) aGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTc < 1:641047/150‑1 (MQ=255) gCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCa < 1:780788/150‑1 (MQ=255) gCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCa < 1:1216646/150‑1 (MQ=255) gCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCa > 2:1980919/1‑150 (MQ=255) tAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAgc < 2:1379434/150‑1 (MQ=255) aaTCCCGAGCGGGTAACGCCCGAGCTGCGGCGCATAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTTTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAgcg < 1:1403329/150‑1 (MQ=255) cccGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCa > 1:2282312/1‑150 (MQ=255) ccGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCt < 2:2358734/124‑1 (MQ=255) ccGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCt > 1:2358734/1‑124 (MQ=255) gggTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTg < 2:813138/150‑1 (MQ=255) ggTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTgg > 2:2353633/1‑150 (MQ=255) ggTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTgg < 1:2397820/150‑1 (MQ=255) ctgcgccgcAGCTGGGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGaa > 2:2181746/4‑150 (MQ=255) tACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAAt > 1:364317/1‑150 (MQ=255) tACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAAt < 1:418484/150‑1 (MQ=255) tACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAAt < 1:81096/150‑1 (MQ=255) aCGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATg > 2:711089/1‑150 (MQ=255) cGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGa > 1:710695/1‑150 (MQ=255) ccccAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGAtt > 1:8839/1‑150 (MQ=255) ccccAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGAtt > 1:671726/1‑150 (MQ=255) cccATCTGCGGCTCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTg < 2:861419/150‑1 (MQ=255) cccAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTg < 1:141868/150‑1 (MQ=255) aGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAg > 1:1273034/1‑150 (MQ=255) ggcgCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAAc > 1:2100131/1‑150 (MQ=255) gcgcAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACg > 1:290577/1‑150 (MQ=255) cgcAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGa < 2:1619263/150‑1 (MQ=255) cgcAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGa < 1:1491843/150‑1 (MQ=255) gcAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAg < 2:303538/150‑1 (MQ=255) cAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAgg < 2:1198892/150‑1 (MQ=255) cAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAgg < 1:499602/150‑1 (MQ=255) cAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAgg < 1:2343248/150‑1 (MQ=255) aGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTGCTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGt < 2:936202/150‑1 (MQ=255) aGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGt > 2:223126/1‑150 (MQ=255) gAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTg > 2:386736/1‑150 (MQ=255) aaGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGc < 1:991177/150‑1 (MQ=255) aaGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGc < 2:290577/150‑1 (MQ=255) aGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCTGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACTAGGTGCt < 1:1938929/150‑1 (MQ=255) aGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCt > 1:1401303/1‑150 (MQ=255) ggTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTg > 2:872046/1‑150 (MQ=255) ggTAGCCAGCCCATAAGTTCGCCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTg > 2:393948/1‑150 (MQ=255) gccagccCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCa > 2:636730/1‑150 (MQ=255) gccagccCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCa < 1:432819/150‑1 (MQ=255) gatttcaaCGTTCGCGCCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCAttt > 1:1928325/8‑150 (MQ=255) tttcaaCGTTCGCGCCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTgg > 2:1841867/6‑150 (MQ=255) cccATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTgg > 1:2382819/1‑150 (MQ=255) tcaaCGTTCGCGCCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTAGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGgcg > 2:1296717/4‑150 (MQ=255) gTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGGCGCggtg > 1:2320013/1‑150 (MQ=255) ttCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGTAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGGCGCggtgg < 2:1484598/150‑1 (MQ=255) cGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGGCGCGGTGGTc < 2:1380637/150‑1 (MQ=255) gcgAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGTAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGGCGCGGTGGTCGttt < 2:242015/150‑1 (MQ=255) | TGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGTTACGCCCCAGCTGCGGCGCAGAAGGTAGCCAGCCCATACGTTCGGCGCGAACGTTGAAATCAATCAGATGACCGCTGTACTTACTGGCATCGGCGAGCGGTGAAAGTAACTCCTGAGCAGAGACTTTTTCATAGCGCCATTGGCTGGAATGATTGTAGAAAAACGAGGTGCTGTTCATTTGGCGCGGTGGTCGGTT > NC_000913/1540498‑1540796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |