| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,555,784 | G→C | 7.5% | intergenic (‑115/+42) | maeA ← / ← sra | malate dehydrogenase, NAD‑requiring/30S ribosomal subunit protein S22 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,555,784 | 0 | G | C | 7.5% | 473.3 / 23.3 | 147 | intergenic (‑115/+42) | maeA/sra | malate dehydrogenase, NAD‑requiring/30S ribosomal subunit protein S22 |
| Reads supporting (aligned to +/- strand): ref base G (61/75); new base C (7/4); total (68/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.47e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
TAAAGCGAACGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATGGTCCAGTCCAAG > NC_000913/1555635‑1555933 | taAAGCGAACGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAg > 2:1228866/1‑150 (MQ=255) aaGCGAACGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATTGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑Gc > 2:546004/1‑150 (MQ=255) aaGCGAACGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑Gc < 1:1901648/150‑1 (MQ=255) gCGAACGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCaa > 2:1735989/1‑150 (MQ=255) aaCGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATgg < 1:2409501/150‑1 (MQ=255) tGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGttt < 1:2467630/150‑1 (MQ=255) tGTTTTTTTGTTTTTGGGTCCATGTGACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTATATCGTTTTTGCTTTACCGCCATGGCGTGGGCCTGTAGTATACAGCAGATAAAACCAAAAACACGATTG‑GCTGCGCAATTGTGttt < 2:1789788/150‑1 (MQ=255) gTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCCTGC‑GCAATGGTGtttt < 1:1228670/150‑2 (MQ=255) gTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCCTGC‑GCAATGGTGtttt < 1:1020367/150‑2 (MQ=255) ttttttGTTTTTGGTTCCCTGTGAGTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCACGGCGTCGGCCTCAAGTATAAAGCAGATAAATACAAAAACACCCTTGCGCAG‑GCAATGGTGTTTAAt < 2:158056/150‑1 (MQ=255) tttgtttttgGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGt < 1:1735989/150‑1 (MQ=255) tgtttttgGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCa < 1:326573/150‑1 (MQ=255) tttttgGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCAtt > 2:2123122/1‑150 (MQ=255) tgGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAgg < 2:358044/150‑1 (MQ=255) tgGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAgg < 1:450216/150‑1 (MQ=255) tgGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAgg < 1:1697213/150‑1 (MQ=255) gTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCCTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAATTATAAAGCAGATAAAAACAAAAACACCATTTCTCAG‑GCAATGGTGTTTAATCGTCATTGAGGat < 2:1684633/150‑2 (MQ=255) ttCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACt < 2:1444852/150‑1 (MQ=255) tCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTg < 2:2473096/150‑1 (MQ=255) tGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATgg < 2:1161437/150‑1 (MQ=255) gTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGt < 2:1993639/150‑1 (MQ=255) gTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGt > 1:1207976/1‑150 (MQ=255) tcactcacTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGtt > 2:1022416/1‑150 (MQ=255) cactcactCTTTTTTGAATATCCATCCCTGGTTGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTa < 1:953156/150‑1 (MQ=255) actcactcTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTAt > 1:129442/1‑150 (MQ=255) ctcactcTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATg < 2:869551/150‑1 (MQ=255) tcactcTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGa < 1:2123122/150‑1 (MQ=255) cactcTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGaa > 1:288889/1‑150 (MQ=255) cactcTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGaa > 1:2367878/1‑150 (MQ=255) actcTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAAt > 2:318180/1‑150 (MQ=255) ctTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTaa > 2:811903/1‑149 (MQ=255) ctTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTaa > 1:731682/1‑149 (MQ=255) tttGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACtttt > 1:416249/1‑150 (MQ=255) tttGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACtttt > 2:233272/1‑150 (MQ=255) ttGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTc < 1:1127919/150‑1 (MQ=255) gAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAg < 2:2133634/150‑1 (MQ=255) atccatccCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCggg > 1:1641954/1‑150 (MQ=255) tccatccCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCgggg < 1:2376787/150‑1 (MQ=255) catccCT‑GGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGt > 2:2106939/1‑150 (MQ=255) tccCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGtt < 2:136648/150‑1 (MQ=255) ccTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGtttt < 1:1065609/150‑1 (MQ=255) cTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTc < 2:943631/150‑1 (MQ=255) ggggggCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTg < 1:1992439/150‑1 (MQ=255) ggggggCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTg < 1:231371/150‑1 (MQ=255) ggggCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAACCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGcc > 2:2380803/1‑150 (MQ=255) ggCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCgg < 1:44790/150‑1 (MQ=255) ttttATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGTTAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTg < 2:2305129/150‑1 (MQ=255) ttttATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTg > 1:1924094/1‑150 (MQ=255) ttATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTggg < 2:453497/150‑1 (MQ=255) tCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTAttt < 1:2391026/150‑1 (MQ=255) tttGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGATGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTtac < 2:1994/150‑1 (MQ=255) ttGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTtact < 1:422685/150‑1 (MQ=255) tGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTtacta > 2:292247/1‑150 (MQ=255) tGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTtacta > 1:1863653/1‑150 (MQ=255) cTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAACCAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGATTTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACg > 1:1931299/1‑150 (MQ=255) tttACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGc < 2:1863653/150‑1 (MQ=255) ttACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCt > 1:1108904/1‑150 (MQ=255) ccGCCATGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTggt > 1:2175804/1‑149 (MQ=255) ccGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGa > 1:2237771/1‑150 (MQ=255) gCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGAtt > 2:1187114/1‑150 (MQ=255) gCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGAtt > 2:105148/1‑150 (MQ=255) gggCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTc < 2:2238601/150‑1 (MQ=255) ggCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCa < 2:288889/150‑1 (MQ=255) gCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCAc > 2:1414434/1‑150 (MQ=255) gTCTGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGGAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCt < 1:1768786/150‑1 (MQ=255) ggCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGATGGATTTGTCACCTTCg > 1:2430656/1‑150 (MQ=255) gCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCgg > 1:617921/1‑150 (MQ=255) cTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTa < 2:1126392/150‑1 (MQ=255) cAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAAc > 1:357488/1‑150 (MQ=255) aaGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACt > 1:2113364/1‑150 (MQ=255) tataAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCAGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTAtt > 1:1157430/1‑150 (MQ=255) taAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTAtttt > 2:216277/1‑150 (MQ=255) aaGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTgc < 2:1108904/150‑1 (MQ=255) gCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTgcgc < 2:641742/150‑1 (MQ=255) gCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTAACCTTCGGTAACTATTTAgcgc > 2:1130077/1‑150 (MQ=255) cAGATAAAAACAAAAACACAATTGCGCAG‑GCAATGGTGTTTAATCGTAATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGAGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCt > 2:88477/1‑150 (MQ=255) gATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTgg > 1:44021/1‑150 (MQ=255) gATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTgg < 1:1782200/150‑1 (MQ=255) tAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGtt > 2:2282246/1‑150 (MQ=255) aaacaaaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGa > 2:2199024/1‑150 (MQ=255) aaacaaaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGa > 2:2472185/1‑150 (MQ=255) cgattaaacaCCATTGCCTGC‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGaa < 1:1373738/145‑1 (MQ=255) cgattaaacaCCATTGCCTGC‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGaa > 1:208504/6‑150 (MQ=255) aacaaaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGaa > 1:1251214/1‑150 (MQ=255) caaaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAt > 1:1655245/1‑150 (MQ=255) ttaaacaCCATTGCCTGC‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAtt > 1:906174/3‑150 (MQ=255) ttaaacaCCATTGCCTGC‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAtt > 1:1993677/3‑150 (MQ=255) aaaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAtt < 2:1923818/150‑1 (MQ=255) aaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAttt < 1:1414434/150‑1 (MQ=255) aaaacaCCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAttt < 1:590436/150‑1 (MQ=255) aaacaCCATTGCCTGC‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAAtttt > 1:1121548/1‑150 (MQ=255) acacCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGTGCGTTTTCTGCCGTTTGGGTTATTTACTACGCTGGATTTGTGAGCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTAt < 2:1130243/150‑1 (MQ=255) acacCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTAt > 1:2262997/1‑150 (MQ=255) cacCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATg < 2:657656/150‑1 (MQ=255) acCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATgg < 2:1641954/150‑1 (MQ=255) acCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGAAGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATgg < 1:225800/150‑1 (MQ=255) cgcAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATGgtccagtc < 2:1711028/150‑1 (MQ=255) cgcAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATGgtccagtc > 1:548504/1‑150 (MQ=255) cgcAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATGgtccagtc < 1:615251/150‑1 (MQ=255) g‑gCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATGGTCCAGTCCAAg > 2:733872/1‑150 (MQ=255) | TAAAGCGAACGCTGTTTTTTTGTTTTTGGTTCCATGTCACTCACTCTTTTTTGAATATCCATCCCTGGGGGGCTTTTATCGTCTTTGCTTTACCGCCAGGGCGTCGGCCTCAAGTATAAAGCAGATAAAAACAAAAACACCATTGCGCAG‑GCAATGGTGTTTAATCGTCATTGAGGACTGATGGTTATGAATTACTTTTCAGCGGGGCGTTTTCTGCCGGTTGGGTTATTTACTACGCTGGATTTGTCACCTTCGGTAACTATTTTGCGCTGGTTAGAAATTTTATGGTCCAGTCCAAG > NC_000913/1555635‑1555933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |