New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 315781 =NA (NA)3 (0.060) 3/252 NT NA noncoding (553/1255 nt) IS3 repeat region
?NC_000913 315875 = NA (NA)noncoding (647/1255 nt) IS3 repeat region

Only 100 of 180 total aligned reads displayed.

ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/315927‑315781
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  >  NC_000913/315875‑316016
                                                                                                                                                                                                                                                                                                 
acgGGCAGGCCGTGTGCGCGGTCGCTGACCGGGCTGAACTTCCGGGAGGCCTGTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  2:92100/140‑1
acgGGCAGGCCGTGTGCGCGGTAGCTGGCCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCCCGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  2:518971/140‑1
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCCGTTCAGCCGGCAGGCGTGG                                                                                                                                                    >  1:373322/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCCGGCGTGG                                                                                                                                                    >  2:462208/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:936963/143‑1
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    >  1:101096/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    >  2:861664/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    >  1:664683/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:29698/143‑1
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:540551/143‑1
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:505687/143‑1
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGCCCGGCGTGG                                                                                                                                                    >  2:577025/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGAGGCGACCCTGAGCACGCAGTCCATCCGTCAGGCGTGG                                                                                                                                                    >  2:285583/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGATGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAATCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    >  1:720541/1‑143
ACAGGCAGGCCGTGTGCGCGGTAGCTGACACGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAACGGGGTAACCCTGACCACGCAGTTCACCCGTCCGCCGTGG                                                                                                                                                    >  2:993674/1‑143
ACAGGCAGGCCGTGGGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:78566/143‑1
ACAGGCAGGCCGTGCGCGCGGTCGCGCACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACAACACAGGGTTGCCGCCACGGTTTTTACGGTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:381460/143‑1
ACAGGCAGGCCGTGCGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:28176/143‑1
ACAGGCAGGCCGGGTGCGCGGTAGCTGACCGGGCTGAACTCCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGG                                                                                                                                                    <  1:385694/143‑1
 CAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGG                                                                                                                                                   <  2:985322/143‑1
 CAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGG                                                                                                                                                   >  1:726194/1‑143
 CAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGG                                                                                                                                                   <  1:675841/143‑1
 CAGGCAGGCCGGGTGCGCCGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGG                                                                                                                                                   <  1:212526/143‑1
  AGGCAGGCCGTGTGCGCGTTGGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGG                                                                                                                                                  <  1:781424/143‑1
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAACGGGGTAACCCTGAGCACGCAGTTCCTCCGTCAGGAGTGGGG                                                                                                                                                  >  1:730483/1‑143
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCGGGCGTGGGG                                                                                                                                                  >  2:271368/1‑143
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCGGGCGTGGGG                                                                                                                                                  >  2:78217/1‑143
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGG                                                                                                                                                  <  1:541465/143‑1
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGG                                                                                                                                                  >  1:750163/1‑143
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGGTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGG                                                                                                                                                  >  1:637272/1‑143
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGGTTTTACGCTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGG                                                                                                                                                  >  1:889620/1‑143
  AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCACGCTTGCCGCCACGGCTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGG                                                                                                                                                  >  2:171928/1‑143
   GGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGC                                                                                                                                                 <  1:274768/143‑1
   GGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGATGTTGCGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGGGGGGC                                                                                                                                                 >  2:607857/1‑143
    cCAGGCCGTGTGCGCGGTCGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                <  2:343517/142‑1
    GCAGGCGGTGTGCGCGGTAGCTGACGGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGCCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                <  2:476326/143‑1
    GCAGGCCGTGTGCGCGGTAGTTGACCGGGCTGAACTGCCGGGAGGCTTATGCCCTCAGTCTCTGACGGGGTAGGCTTGCCGCCACGGTTTTTAAGTTAAAGAGTTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                <  2:72253/143‑1
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTGAGTCCATGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGGAAGCCTGAGCACGCGGCTCATACGTCGGGCGCGGTGCA                                                                                                                                                >  2:582549/1‑143
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGGGTGGGGCA                                                                                                                                                >  2:574770/1‑143
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                <  2:745264/143‑1
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                >  2:108536/1‑143
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                <  1:574164/143‑1
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                <  1:478097/143‑1
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA                                                                                                                                                >  1:817758/1‑143
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTGTACGTTAAAGGGGTAACCCTGAGCACGCAGATCATCCGTCCGGCGTGGGGCA                                                                                                                                                >  2:964560/1‑143
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTCTACGTTAAAGGGGTAACCCTGAGCACGCCGTTCATCCGTCACGCCTGGGGCA                                                                                                                                                >  2:472670/1‑143
    GCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGAGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTCACCCTGAGCACGCAGTACATCCGTCAGGCGTGGCGCA                                                                                                                                                >  2:93052/1‑143
     CAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCAATGCACTCCGTCCCTGACGGCGCAGGCTTGCCGCCACGGATTTTCCGCTAAAGGGTTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTCGGGCAA                                                                                                                                               >  2:663529/1‑143
      agcCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCTTCAGTTCCTGACGGCGCAGGCTTGCCGCCAAGGTTTTTACGTTAAAGGGGTAACCCTGAGTACGCAGTGCCTCGGTCAGGCGTCGGGgccg                                                                                                                                              >  2:413971/4‑139
       GGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACACTGAGCAAGCGGTTCATCCGTCAGGGGTGGGGCgcag                                                                                                                                             >  1:349149/1‑139
       GGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGATTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGGGGGGCccag                                                                                                                                             >  2:114995/1‑139
         CCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTCCATCCGTCAGGAGGGGGGCAAccta                                                                                                                                           >  2:669245/1‑139
         CCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGAAGGCGCCGGCTGGCCGCCACGGTTTTTACGTTAACGGGGTAACCCTGAGCACACAGTTCATCCGTCCGGCGTGGGGCcccgcc                                                                                                                                           >  2:192706/1‑137
                                                                                                                                       ggacggGGGGCAAGGGCCTCCCGGACGGTCAGCCCGGTCGGCTACCGCGCACATGGCCTGCCTGTGGCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACG             <  2:223733/137‑1
                                                                                                                                          ctgtGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAATCAGAAGTGTGCAGTAGACATCACGTACTTACGTAC          <  2:307742/139‑1
                                                                                                                                            gacgcCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAATTCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAG        <  1:864187/138‑1
                                                                                                                                            gacGGCAAAGGCCGCCCGGAAGTTCAGCCCGGTCAGCGACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGCTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACAGCACGTACGTACGTACAG        <  1:46956/140‑1
                                                                                                                                              ggtCAAAGGCCTCCCGGAAGTGCAGGCCGGTCAGCTACCGCGCACACGGCCTGCCGGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCGAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGAT      <  2:156990/140‑1
                                                                                                                                              GGGCGAGGGCCTCCCGGAAGTTCGGCCCGGTCAGCTACCGCGCACACGGCCTGCCAGTGTCAGAAAATCTGTTGGAGCAGGATGTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGAT      <  2:235239/143‑1
                                                                                                                                              GGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGGGCTACGTCGTACTTCCGTACAGca      >  2:482692/1‑141
                                                                                                                                              GGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTGCAGAT      >  1:312387/1‑143
                                                                                                                                              GGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGAT      >  1:801616/1‑143
                                                                                                                                              GGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGAT      >  2:542906/1‑143
                                                                                                                                              GGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGACACATCCCGTACTTACGTACAGAT      >  1:955402/1‑143
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGGTTGTTACGCCAGTGGCCCGAACCAGAAGTGGACAGGAGACGTCACGTCCTTACGTACCGATG     >  2:650620/1‑143
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCCCGTACTTACGTACAGATG     >  2:1002524/1‑143
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATG     <  1:878785/143‑1
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATG     >  1:859113/1‑143
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATG     >  1:837830/1‑143
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATAACGTACTTACGTACAGATc     >  1:556626/1‑142
                                                                                                                                               GGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGAGTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGACCTTACGTACAGATG     >  2:538102/1‑143
                                                                                                                                               GGCAAAGGCCTCCCGGAAGCTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATG     >  2:262814/1‑143
                                                                                                                                               GGCAAAGGCCGCCCGGAAGGTCAGCCGGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGAGGTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATG     <  2:937918/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTTTCAGAAAATCTGTTGGAGCAGGCTTTTTACGCCAGTGGCCCGAACCAGGAGTGGGCAGGAGGCATCGCGTACTTACGTACAGATGA    >  1:919198/1‑143
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAGAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGCACCAGAAGTGGGCAGGAGGCATCACGTACTTGCGTACAGCTGA    >  2:605799/1‑143
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCCGTGGCCCGAACCAGACGTGGGCAGGAGACATCACGTACTTACGTCCAGATGA    >  1:77646/1‑143
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGA    <  1:136812/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGA    <  2:841528/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGA    <  1:641397/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGA    <  2:79854/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGA    <  2:587306/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGA    <  2:692968/143‑1
                                                                                                                                                GCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGGACGTACGTCCAGATGA    >  2:32499/1‑143
                                                                                                                                                 CAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTCCCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAA   <  1:592394/143‑1
                                                                                                                                                 CAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGGGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAA   >  2:693342/1‑143
                                                                                                                                                 CAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTAGTTACGTACAGATGAA   >  1:160603/1‑143
                                                                                                                                                 CAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAA   >  1:445135/1‑143
                                                                                                                                                 CAAAGGCCCCCCGGAAGTTCAGCCCTGTCAGCTACCCCGCACACGGCCTGCCTGTGGCAGAAAAGCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAA   <  2:526633/143‑1
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  >  1:433559/1‑143
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  <  1:990220/143‑1
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  <  1:666349/143‑1
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  >  2:348985/1‑143
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  >  2:401540/1‑143
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  >  1:126009/1‑143
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATATTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGACGAAG  >  2:820573/1‑143
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTG                                                                              >  1:997261/1‑67
                                                                                                                                                  AAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCGGTGTCAGAAAATCTGTGGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGGGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  <  2:381472/143‑1
                                                                                                                                                  AAAGGCCTCCCGGAAGTCCAGCCCGGACAGCTACCGCGCCCACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGCTTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTCCTTACGTCCAGACGAAG  >  1:10711/1‑143
                                                                                                                                                  AAAGGCCGCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  <  2:427521/143‑1
                                                                                                                                                  AAAGCCCTCCCGGCAGCTCAGCCCGGCCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTCGAGCATGATTTTTACGCCAGTGGCCCGAACCAGAAGTCGGCAGGAGACATCACGTACTTACGTACAGATGAAG  <  1:239545/143‑1
                                                                                                                                                                                                                                                                                                 
ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGAACTTCCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/315927‑315781
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAG  >  NC_000913/315875‑316016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.