| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,147,993 | A→C | 10.5% | I125L (ATT→CTT) | plsX → | putative phosphate acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,147,993 | 0 | A | C | 10.5% | 145.6 / 6.6 | 67 | I125L (ATT→CTT) | plsX | putative phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (21/34); new base C (4/4); total (28/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.86e-01 | |||||||||||
CTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGTTCTGGCTGAAGAGGT > NC_000913/1147853‑1148135 | cTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGAtt > 2:782536/1‑143 (MQ=255)cTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGAtt < 2:569728/143‑1 (MQ=255)cTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATGATTGCTCAAGCCCCTGGAGGGGagg > 1:157432/1‑141 (MQ=255) tgtcggcgcCAGGCGTGGGAGTTCAAGGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCATTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTg < 2:452771/138‑1 (MQ=255) tgcctcgcCAGTCGTGGGAGTCCAAGGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGa < 2:106397/138‑1 (MQ=255) acccGCGGCAGTCGTGGGAGTGCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATCCCGGGGCGCTGATGGGGCTGGCAAAATTATTCCTCAATCCCCTCCAGGGGCTTGa < 1:994983/141‑1 (MQ=255) aTCCGGGCCAGTCGGGGGCGTTCCCCGCGCGGGGCCCGGTAGGTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGa < 2:94820/143‑1 (MQ=255) aTCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGCGTCAGATCTTGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAATCCCCTCCAGGGGCTTGa < 1:638886/143‑1 (MQ=255) aTCCGCGCCAGTCGTGGGAGTTCAAGGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGa < 2:427395/143‑1 (MQ=255) tCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAACTTATTACTCAAGCCCATCGAGGGGagggag > 2:865842/1‑138 (MQ=255) tCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGACAAAATTAATACTCAAGCCCCTGGAGGGGATTGAg > 1:817353/1‑143 (MQ=255) ccGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCGAGCCTGCGTCAGTGCCGGTAACACAGGGGCGCGGATGGGGCCGGCGAAATTAGTACGCACGCCCCAGGAGGGGACTgcgc > 2:311731/1‑143 (MQ=255) gcgcCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGCAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGCTTGAGCGt > 1:840636/1‑143 (MQ=255) gcgcCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTACTACCGGCGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGAATGAGCGt > 1:155650/1‑143 (MQ=255) cgcCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAATCCCCTCCAGGGGCTTGAgtaat < 2:784076/143‑5 (MQ=255) tgTCGTGGGTTTTGAATGCGCGTGGCCCTGGAGGTGTTGAAAGAATGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGTGCTGATGGGGCTGGCAAAATTATTACTCAAGCCTCTGGAGGGGATTGAGCGTCCGgc < 2:317040/142‑1 (MQ=255) tCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGAGTGAGCGTCCGgcgc > 1:711685/1‑143 (MQ=255) gTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCGGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGAGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTg > 2:829228/1‑143 (MQ=255) tGGGATGTCAATGCGCGCGCCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTgg < 2:562356/143‑1 (MQ=255) gTTCAATGCGCGTGGCCGTGCAGCGGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACg < 1:316521/143‑1 (MQ=255) ttCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACgg > 1:108790/1‑143 (MQ=255) gccAAGGCGCGCGGGCCGGCGGCGGGTGGAAGGGGGTCGGGCCCGAGCGTGGGGCAGGGCCGGTAATCCCGGGGCGTTGCTGGGGCTGGCAAAATTATTACGCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACgg < 2:298225/141‑1 (MQ=255) cAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGCGGCTGGCAAACTTATTACTCAAGCCCCTGGCGGGGGTTGACCGTCCGGCGCTGGTGaggaca > 1:982774/1‑138 (MQ=255) gaggcgcGTGGCTTTGGAGCTGGTGGGGGGGGGGCGAGTGCGAGCCGGGGGCAGTGCCGGTACTGCCGGGGCGGTGAGGGGGCTGGCAAAATTCTTGCTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTAt < 2:963696/140‑1 (MQ=255) tGCGCGTGTCGCTGGGGCTGGTGAGAGAAGGTCGGGCGCGAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTa < 2:138911/143‑1 (MQ=255) gcgcGTGGCCCGGGAGCGGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATATCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTAc < 1:511139/143‑1 (MQ=255) cgTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGATGGGATTGAGCGTCCGGCGCTGATGACGGTATTAcccc > 2:563949/1‑141 (MQ=255) tGGCCCTGGGTCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACAt < 2:953838/143‑1 (MQ=255) gCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCa < 1:664719/143‑1 (MQ=255) cagtGGAGATGGTGAAAGTAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAAGACCGGGGCGCTGATGGGGCTGGCAAAATTATTCCTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAg < 2:141145/140‑1 (MQ=255) gCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAgg < 1:673048/143‑1 (MQ=255) cTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAggg < 2:717433/143‑1 (MQ=255) ggTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCa > 1:45883/1‑143 (MQ=255) gTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCaa > 2:185739/1‑143 (MQ=255) gTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCaa > 1:128721/1‑143 (MQ=255) gTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCaa > 1:890735/1‑143 (MQ=255) tGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCaaa < 1:729658/143‑1 (MQ=255) gAAAGAAGGTGGAGCGCAGGCTTGTGTCGGTGCCGGTGTTACCGGGGCGCTGAGGGGGCTGGCAAAATTATTACTCAAGGCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCaaaa < 2:447340/143‑1 (MQ=255) gAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAACGGGCaaaa > 1:642548/1‑143 (MQ=255) agaagGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCGAAAGGGCAAAAAgg > 1:837545/1‑143 (MQ=255) cGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGTGGGGATGGAGACTAACGCGCTTGTGACGGTATTACCACATCAGCAAGAGGGCAAAACGGTGGTCCt > 2:449758/1‑143 (MQ=255) aGCGCAAGCCTGGGTCAGTGCCGCAAATCTAGTTTTTTTTATGGGGCTGGCAAAATTATTACTCAAGCCCCTGTAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTg < 1:955551/143‑1 (MQ=255) gcgcAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAGTTATTACTCAAGCGCCGGGAGGGGGTTGAGCGGCCGGGGCTGGTGACGGAATCACGACATCAGCAGGGGGGGAAAACGGCGGTCCTTGa > 1:785689/1‑143 (MQ=255) ccTCTGTCAGTGCCGGTAATACCGCGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAggg < 1:857852/143‑1 (MQ=255) tgtgTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGCTTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGCGGTCCTTGACTTAGGGGc > 1:188818/1‑143 (MQ=255) gCCGGTACGACCGGGGCGCTGAGCGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGa < 2:941398/143‑1 (MQ=255) gCCGGTAATGCCGTGGCGCGGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGa < 2:86542/143‑1 (MQ=255) ccGGTAATACCGGGGCGCTGATGGGGCTGGCAAAACTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCCGCAAAAGGGCAAAACGGTGGGCCTTGACTTAGGGGCCAACGTCGAt > 2:628758/1‑143 (MQ=255) ggTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGGTGGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTCGGGGCCAACGTCGAGtg > 1:50124/1‑143 (MQ=255) ggTAATACCGGGGCGCTGAAGGGGCTGGCAAAATTATTACTCAAGCCCCTGGGGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACCTCAGCAAAAAGGCAAAACGGTAGTCCGTGGCGTCGTGGCCAACGCAGATtg > 2:5183/1‑143 (MQ=255) gtacgaCCGGGGCGTTGATGGGGTGGGCAAAATTATTACTCCAGCGCCTGGAGGGGATTGAGCGTCGGGCGCTGGGGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCTTTGACTTAGGGGCCAACGTCGATtgt < 2:579126/138‑1 (MQ=255) aaTGCCGGGGCGCGGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGa < 1:674205/143‑1 (MQ=255) tagcGGGGCGCTGATGGGGCTGGCAAAATTATTACTCCAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACa < 2:421245/140‑1 (MQ=255) gaCCGGGGCGCTGATTGGGCTGGCAAAATTAGTACCCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACCGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACa < 1:760663/142‑1 (MQ=255) aCCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAg < 1:152055/143‑1 (MQ=255) cGGGGCGCTTATGGGGGTGGCAAAATTGTGCCTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGca < 2:835160/143‑1 (MQ=255) gcgcTGAGGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAAt < 1:330292/143‑1 (MQ=255) ggATGGGGTCGTCAAAATGAGCACTCCAGCCCCTGGAGGGGATTGAGCGTCCTGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTg < 2:188541/142‑1 (MQ=255) tGGGGGTGGCAAAATGATTGCTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTg < 2:890735/143‑1 (MQ=255) aaaaTTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGCCGGCACGCTGCTGGTGCAATTTGCCa > 2:505901/1‑143 (MQ=255) attattACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGCGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTa < 2:188818/143‑1 (MQ=255) atagtaCTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTAt < 1:224057/139‑1 (MQ=255) attaCTCAAGCCCCTGGAGGGGCTTGAGCGTCCGGCGCTGGTGACGGTATTGCCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGCCAGCACAATGCTGGTGCAATTTGCCACTCTgg > 2:325167/1‑143 (MQ=255) taCTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACAGCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCGAACGTCGATGGTGGCAGCACAGTGCTGTTGCGACTTGGCGATATGGGc > 1:399334/1‑143 (MQ=255) cTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTc > 1:393758/1‑143 (MQ=255) tCAATCCCCTCCAGGGGCTTGAGCGTCCGGCTCTGGAGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCa > 1:476553/1‑143 (MQ=255) cAAGCCCGTGGAGGGTCATGGGCGTTCGGCGCGAGTGACTCTATTACCACATCAGCATAACGGCAACCCGTAAAGCCTCGACTTAGTGGCCAACGTCGATTGTTACAGCACAATGCTGGTGCAATTTTCCATTATGGGCTCAg < 2:120844/143‑1 (MQ=255) aGCCCCTGGAGGGGATTGAGCGACCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGtt > 1:178173/1‑143 (MQ=255) ccTGGAGGGGGTCGAGGGTCGGGCGGTGGTGACGGTATTACCACATCACCAAAAGGGCAAAACGGGGGGCCTTCACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGTTCTgg < 2:680849/143‑1 (MQ=255) aTTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGGGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGTTCTGGCTGAAGAggt < 1:710427/143‑1 (MQ=255) | CTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGTTCTGGCTGAAGAGGT > NC_000913/1147853‑1148135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |