Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 288,813 T→C 9.8% E117G (GAA→GGA)  xynR ← CP4‑6 prophage; DNA‑binding transcriptional repressor XynR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913288,8130TC 9.8% 138.9 / 2.9 57E117G (GAA→GGA) xynRCP4‑6 prophage; DNA‑binding transcriptional repressor XynR
Reads supporting (aligned to +/- strand):  ref base T (21/29);  new base C (3/3);  total (25/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGGTAGTGTACTGATAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGACAAAATGGCCGCGCT  >  NC_000913/288673‑288954
                                                                                                                                             |                                                                                                                                             
aGGTAGTGTCCTGCTAGCCCGCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTCGCCGCTGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCa                                                                                                                                             <  2:577954/143‑1 (MQ=255)
     gtgtGCCGATAGCCGTCCAGCAGGGCGTTCAGCGCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAAtctt                                                                                                                                        <  2:684178/143‑1 (MQ=255)
     gggtACGGATAGAGCGCCAGGAGGGCGTGCAGCTCGGCCGCGT‑GCAGCCGGGCGAGCAACACCTTGGCGATGGCGGGGGCGGGCACCGGCAGGGGGCGGCCGAGGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAAtctt                                                                                                                                        <  1:356333/141‑1 (MQ=255)
       gtACTGATAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGACGGCGGCCAGCTCGCCTGCAAtcttct                                                                                                                                      >  2:570933/1‑143 (MQ=255)
        tattGACAGCCCTCCAGCTGGGTGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTtctc                                                                                                                                     <  2:563579/140‑1 (MQ=255)
        tACTGATAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CTAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTtctc                                                                                                                                     <  1:958689/143‑1 (MQ=255)
        tACTGATAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTtctc                                                                                                                                     <  2:671578/143‑1 (MQ=255)
        aaCTGATAGCCCGCCAGCAGGGCGTTCAGCCCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTtctc                                                                                                                                     <  1:280932/142‑1 (MQ=255)
          cTGATGGCCCTCCAGCAGGGCGTTCAGGTCGG‑AACGCGCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGa                                                                                                                                   <  2:713825/143‑1 (MQ=255)
            gATAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGata                                                                                                                                 <  1:345548/143‑1 (MQ=255)
             aTAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTTCACCGGCAGGCGGCGGCCGATGCGTGCATAGGCGATCGCGGCCAGCTTGCCTTCCATCTTCTCGatac                                                                                                                                >  1:575967/1‑142 (MQ=255)
                      cggcggggCGTTCGGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTGGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCtt                                                                                                                       <  2:430139/138‑1 (MQ=255)
                      cagcagGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGAAGCCAGACCGCTGTCCTTCAATCTTCTCGATATAGACCCCtt                                                                                                                       >  1:687092/1‑143 (MQ=255)
                        gcagGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATACACTCCTTCa                                                                                                                     <  2:945946/143‑1 (MQ=255)
                           gggCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGACTAGGCGATGGCGGCCAGCTTGCCATCAATCTTCTCGATATAGACACCTTCACGc                                                                                                                  >  1:6070/1‑143 (MQ=255)
                                ttCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCACTCTTCTCGATATAGACCCCTTCACGCCCGTc                                                                                                             >  2:733710/1‑143 (MQ=255)
                                 tCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTcc                                                                                                            >  1:350659/1‑143 (MQ=255)
                                 tCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTcc                                                                                                            >  2:783649/1‑143 (MQ=255)
                                  catcccGGCCTCGC‑CCAGCCAGCCAACCAACCCCTTGCCGATGGCGGTGGCGTGCACAGGCAAGCGGCGTCCTATGCGTGAATAGGCTATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCa                                                                                                           <  1:471024/138‑1 (MQ=255)
                                   aGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAg                                                                                                          <  1:972534/143‑1 (MQ=255)
                                   aGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAg                                                                                                          <  1:536646/143‑1 (MQ=255)
                                        ggCCCCGC‑CCAGCCAGGCAATCGACTGCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATcc                                                                                                     <  2:775910/143‑1 (MQ=255)
                                                    gcccgGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGggtg                                                                                          <  2:235123/143‑1 (MQ=255)
                                                       agGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCGTGCCTTCAATCTTCTCGATAGAAACCGCTTCTCGCCCGTCCAGGCTCCCCCGATGGGTGGTc                                                                                       >  1:514858/1‑143 (MQ=255)
                                                       agGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATACGCGATGGCGGCCAGCATGCCTTCAATCTTCTCGATATAGACCCCTTCCCGCCGGTTCGGGAGCCCCAGATGCGTGGTc                                                                                       >  2:4910/1‑143 (MQ=255)
                                                             tCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGCCGGGTGGTCTGCCCg                                                                                 >  2:276032/1‑143 (MQ=255)
                                                                acacCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGCATAGGCGATGGCGGCCAGCTTGCCTCCAATCTTCTCGATATAGACCCCTTCCCCCCCGTCCAGGCGGCGCCGATGCGTGGCCTGCCCgccc                                                                              >  2:383876/1‑140 (MQ=255)
                                                                acacCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTCCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTc                                                                              >  1:168279/1‑143 (MQ=255)
                                                                acacCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTCCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTc                                                                              >  1:662224/1‑143 (MQ=255)
                                                                          gATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACa                                                                    >  2:687756/1‑143 (MQ=255)
                                                                          gATGGCGGGGGCGGGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACa                                                                    <  1:404622/143‑1 (MQ=255)
                                                                           aTGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCTATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAg                                                                   >  1:808766/1‑143 (MQ=255)
                                                                               cGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTcc                                                               <  2:837871/143‑1 (MQ=255)
                                                                                       tGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGGCAGCTCCGCcaggca                                                       >  1:338473/1‑143 (MQ=255)
                                                                                        gCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTcagcccg                                                      >  2:521520/1‑141 (MQ=255)
                                                                                              gCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCtttt                                                <  1:808990/143‑1 (MQ=255)
                                                                                              gCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGGCCAGGATCCCCAGCTGGGTGGTCCGGCCGGTCCGCCGGGCCACCGCCGTCagccagccgtgt                                                >  2:843532/1‑139 (MQ=255)
                                                                                                           gATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGaa                                   <  1:946903/143‑1 (MQ=255)
                                                                                                           gATGCGGGGATAGGCGATGGCGGCCAGCTTGCCTTCACTCGTCGCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGaa                                   <  2:415540/143‑1 (MQ=255)
                                                                                                            aggCGTGAATGGGGGGTGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAat                                  <  2:59123/141‑1 (MQ=255)
                                                                                                               cGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATc                               >  1:395922/1‑143 (MQ=255)
                                                                                                               cGTGAATAGGCGATGGCGGCCAGCTTGCCTCCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCCGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATc                               <  2:168279/143‑1 (MQ=255)
                                                                                                               cGTGAATAGGCGATGGCGGCCAGCTTGCCTCCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATc                               <  2:662224/143‑1 (MQ=255)
                                                                                                                gTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCg                              <  1:211373/143‑1 (MQ=255)
                                                                                                                   aaTAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATg                           >  1:598570/1‑143 (MQ=255)
                                                                                                                   aaTAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCCCCGTCAGCCAGCCTTTTGCCCTCTGCCGAATAGCGGTg                           >  2:264487/1‑143 (MQ=255)
                                                                                                                         cGATGGCGACCAGCTTGCCTTCAATCTTCTCGATATAAACCCGTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAGTATCGATGGAGccc                     >  2:454860/1‑143 (MQ=255)
                                                                                                                          gATGGCGGCCGGGTTGTCTTCAGGTTTCTCGATATAGCCCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCa                    <  2:568492/143‑1 (MQ=255)
                                                                                                                             ggcggcCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGa                 >  2:222968/1‑143 (MQ=255)
                                                                                                                             ggcggcCAGCTTGCCTCCAATCTGCTCGATAGAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGa                 <  2:856447/143‑1 (MQ=255)
                                                                                                                                cgcCAGCTTCCCTTCAATCTGCTCGATATAGCCCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGACaa              <  1:301639/142‑1 (MQ=255)
                                                                                                                                 gctcgCTTGCCTTCACGCGTCCCGATATAGACCCCTTCGCGCCCGTCCAGGATCCCCAGATGGGTGGTCAGCCCCTTCTTCCTGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGACaaa             <  2:254032/139‑1 (MQ=255)
                                                                                                                                  ccAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGCGCCCACGACaaaa            >  1:831988/1‑143 (MQ=255)
                                                                                                                                    aGCTCGCCTTCAATCTGCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGAGGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGACAAAATg          <  2:966190/143‑1 (MQ=255)
                                                                                                                                       ttGCCTTCAATCTTCTCGATATAGACCCCTTCTCGCCCGTCCAGGATCCCCAGCTGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTTCCTTCTGCCGAATATCGATGGAGCCCACGACAAAATGGcc       <  2:76709/143‑1 (MQ=255)
                                                                                                                                       gggCCTTCAATCTTCTCGATAGAGACCCCGTCACGCCCGTCCAGGAGCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGACAAAATGGcc       <  1:20783/141‑1 (MQ=255)
                                                                                                                                           cTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGGCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCCTCGGCCGACTCTCGCCGGAGCCCACGCCCAAACGGCCccgc   >  2:908046/1‑143 (MQ=255)
                                                                                                                                            ttCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGCTGGAGCCCACGACAAAATGGCCGCGCt  >  1:444388/1‑143 (MQ=255)
                                                                                                                                            ttCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATACGTGGTCTGCCCGGTCCGCCGGGGCAGCTCCGTCAGCCAGGCTCTTGGCTACTGCCGAACATCGCTTGAGCCCACGACAAGATGCCCgcgcc  >  2:350974/1‑142 (MQ=255)
                                                                                                                                             |                                                                                                                                             
AGGTAGTGTACTGATAGCCCTCCAGCAGGGCGTTCAGCTCGGCCTCGC‑CCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGCAGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTCAGCCAGCCTTTTGCCTTCTGCCGAATATCGATGGAGCCCACGACAAAATGGCCGCGCT  >  NC_000913/288673‑288954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑