mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 572411 | 830 (16.120) | 7 (0.140) | 5/248 | NT | 1.1% | coding (44/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572431 | 529 (10.850) | coding (64/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | = 572352 | 1560 (30.300) | 17 (0.340) | 8/252 | NT | 1.2% | intergenic (+101/‑16) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572369 | 1319 (26.630) | coding (2/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | = 570701 | 1708 (33.170) | 17 (0.350) | 10/248 | NT | 1.0% | intergenic (+273/‑192) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | = 570711 | 1637 (33.590) | intergenic (+283/‑182) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570695 = | 1684 (32.710) | 28 (0.570) | 11/248 | NT | 1.7% | intergenic (+267/‑198) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570719 = | 1637 (33.590) | intergenic (+291/‑174) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570627 = | 1932 (37.520) | 4 (0.090) | 4/236 | NT | 0.24% | intergenic (+199/‑266) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570677 = | 1545 (33.310) | intergenic (+249/‑216) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 568556 = | 2094 (40.670) | 36 (0.710) | 14/258 | NT | 1.7% | coding (242/333 nt) | emrE | multidrug/betaine/choline efflux transporter EmrE |
| ? | NC_000913 | 568579 = | 2056 (40.550) | coding (265/333 nt) | emrE | multidrug/betaine/choline efflux transporter EmrE | |||||
| * | ? | NC_000913 | = 568274 | 1717 (33.350) | 3 (0.060) | 3/242 | NT | 0.19% | intergenic (+27/‑41) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| ? | NC_000913 | = 568289 | 1649 (34.670) | intergenic (+42/‑26) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE | |||||
| * | ? | NC_000913 | 568265 = | 1698 (32.980) | 7 (0.150) | 6/242 | NT | 0.43% | intergenic (+18/‑50) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| ? | NC_000913 | 568300 = | 1649 (34.670) | intergenic (+53/‑15) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE | |||||