New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2064765	33 (0.730)	3 (0.070)	3/254	NT	8.4%	coding (458/744 nt)	cobS	cobalamin 5'‑phosphate synthase
	?	NC_000913	= 2064780	34 (0.780)					coding (443/744 nt)	cobS	cobalamin 5'‑phosphate synthase

ATGCATACCCGGCAATAATACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACAAAAATCAATGCCAGACCGCCGTGGGTGCCTAAACGGCTAT  >  NC_000913/2064623‑2064906                                                                                                                                               |                                                                                                                                              aTGCATACCCGGCAATAATACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGG                                                                                                                                               <  1:510674‑M1/143‑1 (MQ=255)  ggCACACCTGCCAATGATAGGGCAGCAAAAATGGCGGCTAAGCCGAGTGTGACGCAGGTTTGTGGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCGTCGTCCCGCGCACAACGATGACGATACATCAATAATGCGGc                                                                                                                                              <  2:522494/142‑1 (MQ=255)   gCATACCCGGCAATAATACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCa                                                                                                                                             <  1:829491/143‑1 (MQ=255)     aaaCCCGGCAATAATACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGt                                                                                                                                           <  1:185888/141‑1 (MQ=255)             cAATAATACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGc                                                                                                                                   >  1:7628/1‑143 (MQ=255)                  aTACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCCGTCCCGCGCCTGAcc                                                                                                                              <  1:644420‑M2/143‑3 (MQ=255)                   taCGGGAGCAAAAAGAGCCGCTAAGCCGAGTGCGACGCAGGTTTGCCGCCCATCAATTTTGCCAATGGACACATTGCCAAGCCCTTCTTCCCGCGCATACCGCAAACGTTTGAGCAATAATGCGGCAGTCCCGCGGCTGACCg                                                                                                                             <  2:275074/143‑1 (MQ=255)                          gcaAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGtcagccgcgggactgccgcattatt                                                                                                                      <  1:416111‑M1/143‑26 (MQ=255)                            aaaaaTAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGCCAGTCCCGCGGCCGACCGCACAtgctg                                                                                                                    >  2:612711/1‑143 (MQ=255)                                     ggCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTTCCGCCAGCg                                                                                                           >  2:791873/1‑143 (MQ=255)                                            ccGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACTATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAg                                                                                                    <  1:512063/143‑1 (MQ=255)                                                 tgtgACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGGTCg                                                                                               >  1:368438/1‑143 (MQ=255)                                                 tgtgACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGACTGACCGCACCTCCTGCCGCCAGCGATGCCAgcaccg                                                                                               >  2:420091/1‑138 (MQ=255)                                                       gCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGc                                                                                         <  2:356428/143‑1 (MQ=255)                                                       gCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGACAGTCCAGCGGCTGAACACACATGCTGCCACAAGCGATGCAAGGAACAATACGc                                                                                         >  2:1471/1‑143 (MQ=255)                                                           gTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCCCg                                                                                     >  1:42705/1‑143 (MQ=255)                                                               gTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCAGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCaga                                                                                 <  1:879301/143‑1 (MQ=255)                                                                    ccATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCaa                                                                            <  1:716007/143‑1 (MQ=255)                                                                      aTCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCCGACCCAACt                                                                          >  1:817298/1‑143 (MQ=255)                                                                           ttttGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAAGGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCtt                                                                     <  2:45175/143‑1 (MQ=255)                                                                                ccAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAacac                                                                >  2:693639/1‑143 (MQ=255)                                                                                 cAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGtcagccgcgggactgcc                                                                                                                              >  1:61578‑M1/1‑63 (MQ=255)                                                                                 cAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGtcagccgcgggactgcc                                                                                                                              <  2:61578‑M1/80‑18 (MQ=255)                                                                                    tGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGa                                                            >  1:675267/1‑143 (MQ=255)                                                                                         acaTTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCCGAGCCGACTCGCTTAACACCAGGATCtt                                                       >  1:611889/1‑143 (MQ=255)                                                                                          caTTGCCAAGCCCTTCTTCTCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCttt                                                      <  1:726628/143‑1 (MQ=255)                                                                                            ttGCCAGGCCCTTCTCCCCGCGCATAACGATGACGATACATGAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGc                                                    <  2:612795/143‑1 (MQ=255)                                                                                              gccacccccTTCTTCCCGGTCGTAACGATGACTATACATCAATAAGCCGGCAGTCCCGCGGCTGACCGCCCATGCTCCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCa                                                  <  1:294082/137‑1 (MQ=255)                                                                                                 aaGCCCCTCTCCCCCCTCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTa                                               <  1:494716/143‑1 (MQ=255)                                                                                                   gCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCAAATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTACCACCAGAATCCTTGCCAGTccc                                             >  2:600600/1‑143 (MQ=255)                                                                                                   gCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCAAATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAAACTTTGCCAGTAcc                                             >  2:600444/1‑143 (MQ=255)                                                                                                    cccTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCATAACCTTTTcccgagaca                                            >  2:793823/1‑136 (MQ=255)                                                                                                    cccTTCTGCCTGCGCATAACGAGGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACTCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACca                                            <  1:9555/143‑1 (MQ=255)                                                                                                        ccctcCCGCGCATAACGACGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACaaa                                        <  1:358108/140‑1 (MQ=255)                                                                                                             ccGCGCATAACGATGGCGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGGCGCCAGCGAGGCAAGGAGCGATGCGCCACGCAGAGCCAGCACGCGAAAACCCAGAATCTTCGCCAGCACGACAAAGATCa                                   >  2:1890/1‑143 (MQ=255)                                                                                                              cgcgCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACAAAAATCaa                                  <  1:377767/143‑1 (MQ=255)                                                                                                               ccgcCTACCGATCACGAGACGCCAATAATGCGGCAGTCCCGCGGCTGACCGCACGTGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACAAAAATCAAt                                 <  2:420463/142‑1 (MQ=255)                                                                                                                 gcatcccGATGACGATACCTCCATACGGCGGCAGTCCTGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACAAAAATCAATGc                               <  2:849382/137‑1 (MQ=255)                                                                                                                 ccagaaCGCTGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAAACTTTGCCAGTACCACAAAAATCAATGc                               <  2:887874/139‑1 (MQ=255)                                                                                                                      aCGAGGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACAAAAATCAATGCCAGAc                          <  1:443988/143‑1 (MQ=255)                                                                                                                                 aCAGCAAGAAGGCGGCAGTCCCGCGGCGGACGGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACGCGCTTAACACCAGAATCTTTGCCAGGACCACAAAAATCAATGCCAGACCGCCGTGGGTg               <  1:63875/143‑1 (MQ=255)                                                                                                                                      aataatGCGGCAGTCCCGCGGCTGAccgcattattgatgtatcgtcatcgttatgcgcgggaagaagggcttggcaatgtgttcattggcaaaattgatgggcgacaaacctgcgtcacactcggcttagccgctatttttgc          <  1:416111‑M2/143‑119 (MQ=255)                                                                                                                                          aggCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGCATCTTTGCCAGTACCAGAAAAATCAATGCCAGACCGCCGTGGGTGCCTAAACgg      <  1:612711/141‑1 (MQ=255)                                                                                                                                              ggtcaggcgcgggacggccgcattattgatgtatcgtcatcgttatgcgcgggaagaagggcttggcaatgtgttcattggcaaaattgatgggcgacaaacctgcgtcacactcggcttagccgctatttttgctgccgtat  <  1:644420‑M1/143‑142 (MQ=255)                                                                                                                                              ggCAGTCCCGCGGCTGAccgcattattgatgtatcgtcatcgttatgcgcgggaagaagggcttggcaatgtgttcattg                                                                 >  1:61578‑M2/1‑17 (MQ=255)                                                                                                                                              ggCAGTCCCGCGGCTGAccgcattattgatgtatcgtcatcgttatgcgcgggaagaagggcttggcaatgtgttcattg                                                                 <  2:61578‑M2/80‑64 (MQ=255)                                                                                                                                               |                                                                                                                                              ATGCATACCCGGCAATAATACGGCAGCAAAAATAGCGGCTAAGCCGAGTGTGACGCAGGTTTGTCGCCCATCAATTTTGCCAATGAACACATTGCCAAGCCCTTCTTCCCGCGCATAACGATGACGATACATCAATAATGCGGCAGTCCCGCGGCTGACCGCACATGCTGCCGCCAGCGATGCAAGGATCGATTCGCCACGCAGAGCCAACTCGCTTAACACCAGAATCTTTGCCAGTACCACAAAAATCAATGCCAGACCGCCGTGGGTGCCTAAACGGCTAT  >  NC_000913/2064623‑2064906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.