New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3690179 =53 (1.170)3 (0.070) 3/250 NT 5.5% coding (83/1107 nt) bcsZ endo‑1,4‑D‑glucanase
?NC_000913 3690205 = 52 (1.210)coding (57/1107 nt) bcsZ endo‑1,4‑D‑glucanase

TATCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCA  >  NC_000913/3690039‑3690321
                                                                                                                                            |                                                                                                                                              
tgatattgctggcatgggtactgtggcgtctgctgcgaattattagtcgtcgtcgtcttaacccggataacgagtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttcag                                                                                                                                              <  2:745841‑M1/3‑1 (MQ=255)
tgatattgctggcatgggtactgtggcgtctgctgcgaattattagtcgtcgtcgtcttaacccggataacgagtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgccttgagtgttcag                                                                                                                                              <  2:661449‑M1/3‑1 (MQ=255)
tatCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCcag                                                                                                                                              <  2:109838/143‑1 (MQ=255)
  tCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCcaggc                                                                                                                                            <  2:533433/143‑1 (MQ=255)
    attgctggcatgggtactgtggcgtctgctgcgaattattagtcgtcgtcgtcttaacccggataacgagtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttcaggcag                                                                                                                                          <  1:490175‑M1/7‑1 (MQ=255)
             aCGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGGGATGTTGCGCGCGTCGCTGGGGTCGATGACGCGGCCTTCCTGGCTGATGTAAACCTTTGTGAACTGCTGCCAGGCGGGCCATGTAc                                                                                                                                 >  2:567180/1‑143 (MQ=255)
                        ccgccAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGa                                                                                                                      >  1:745841/1‑143 (MQ=255)
                         cgccAGGGCGGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGGCGCGCCCTTCCTGACTGATGTACTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGaa                                                                                                                     <  2:204889/143‑1 (MQ=255)
                         cgccAGGGCAGAGAACATGCCGTTGCTTGGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGaa                                                                                                                     <  2:579061/143‑1 (MQ=255)
                              gggCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTa                                                                                                                >  2:762433/1‑143 (MQ=255)
                               ggCAGAGAACATGCCGTAACTTTGGCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTaa                                                                                                               <  2:667774/143‑1 (MQ=255)
                                gCAGAGAACATGCCGTAACTGTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGCTGACGCGCGCTTCCTGACTGATGTAATCCTGTTTAAACTGATCCCAGGCAGGCCAGGGACAGGCCGCCTGAacacagaa                                                                                                              >  2:876224/1‑139 (MQ=255)
                                  agagAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTATGCGCGCGTCGCTGGGGTCGATGACGCGCCCATCCTGAATGATGTAAACCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCAGAACACTAAAgg                                                                                                            >  2:29642/1‑143 (MQ=255)
                                     aattagtagtcgtcgtcgtgttaacccggagcacgagtaagtggaggtgaatgggttgcgtagtggaatcgggacgatgcggctgctggctgcctttagtgttCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGcag                                                                                                         >  2:731008‑M1/104‑143 (MQ=255)
                                      aaCATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGcagc                                                                                                        <  1:339113/143‑1 (MQ=255)
                                         aggCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGcagccag                                                                                                     <  2:743856/141‑1 (MQ=255)
                                            ccGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCcagcag                                                                                                  >  2:476876/1‑143 (MQ=255)
                                              gTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGCCGCTGTGCTCGCTGACGCCCCCTTCCGGTCTGACGCCAGTCTCTTTAAACTCATCCCCCGCCAGCCCCGTACAAGCCCCCCAACCACTAACAGCAACcagcagaa                                                                                                >  2:315544/1‑141 (MQ=255)
                                                  cTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCAt                                                                                            >  1:296867/1‑143 (MQ=255)
                                                    ttGCCTTTCGGGGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCg                                                                                          <  2:699369/143‑1 (MQ=255)
                                                      gCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTc                                                                                        <  1:439138/143‑1 (MQ=255)
                                                        ccTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCAc                                                                                      <  1:655923/143‑1 (MQ=255)
                                                            cGGAGGCGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCGCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGAtt                                                                                  <  1:591304/143‑1 (MQ=255)
                                                             ggAGGTGGTGATTTTGCGCCCGTCGCTGGGGTCGATGACGCGCCCTGCCTGACTGATGTAATCCGTTTGAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGACCACTAAAGGCAGCCAGCAGCAGCCTCGTCACGATTc                                                                                 <  1:573523/143‑1 (MQ=255)
                                                               aGGTGGGGAGTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCGTCCTGACTGATGTAATCCGTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACGAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCa                                                                               <  1:259483/143‑1 (MQ=255)
                                                                    gtgATTTTGTGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCCGAACACTAAAGGCAGCCAGGGGCAGCATCGTCACGATTCCGCGACg                                                                          >  1:504241/1‑143 (MQ=255)
                                                                       aTTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCaa                                                                       <  1:417346/143‑1 (MQ=255)
                                                                         gtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCagcagcagc                                                                                              >  2:297331‑M1/68‑118 (MQ=255)
                                                                         gtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCagcagcagc                                                                                              <  1:297331‑M1/51‑1 (MQ=255)
                                                                                     gCTGGGGTCGATGACGCGCCCTTCATGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCAACGCCACGAATCCACTACGCAACACAAGCATCTTCa                                                         >  2:446853/1‑143 (MQ=255)
                                                                                      cTGGGGTCGATGACGCGCCCTTCCTGATTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCaa                                                        <  1:172193/143‑1 (MQ=255)
                                                                                      cTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATCCATCTTCaa                                                        <  1:505472/143‑1 (MQ=255)
                                                                                      cTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTCCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCACCATCCTCCCGATGCCCCCCCGCCACCCACTCACCTTCaa                                                        >  1:417291/1‑143 (MQ=255)
                                                                                      cTGGGGTCGATGACGCGCCCTGCCTGACTGATGTAATCCTTTTTAAACCGCTACAAGGCAGGACCGGTACGGGCTGCCTGAACACTAAAGACACCAACCAGATGCATAGTTTCGGTTCCACTACGCAACACATTCATCTTCaa                                                        <  2:360198/143‑1 (MQ=255)
                                                                                      cTGGCGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCaa                                                        <  1:768390/143‑1 (MQ=255)
                                                                                       tGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACCCCTTCATCTTCact                                                       >  1:265784/1‑141 (MQ=255)
                                                                                           gTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACt                                                   <  1:476876/143‑1 (MQ=255)
                                                                                            tCGATGACTCGCCCTTCCTGACAGATGTAATCCTTTTTAAACTGCTAGCGGGTAGGCCATCTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTc                                                  <  1:202649/143‑1 (MQ=255)
                                                                                            tCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCCTCAATGACTc                                                  >  2:245576/1‑143 (MQ=255)
                                                                                            ctgctGACGCGCCCTTTCCTACGTATGTAATCCTTTTTAGACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTc                                                  <  2:348550/139‑1 (MQ=255)
                                                                                              gATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCCTCGTCACGCTTCCCCTCCGCCACCCCTTCATCTTCAATTACTCGt                                                >  1:756857/1‑143 (MQ=255)
                                                                                                     cgcCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCgg                                         <  1:762433/143‑1 (MQ=255)
                                                                                                            ccTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAga                                  <  1:98651/143‑1 (MQ=255)
                                                                                                              tgactgaTGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCCTCTTCAATTACTCGTTATCCGGGTTAAgacg                                >  1:494835/1‑143 (MQ=255)
                                                                                                              tgacggaTGTAAGCCTGTTTAAACGGCCCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacg                                <  1:351185/143‑1 (MQ=255)
                                                                                                                actgaTGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCCCGATTCCACTACGCAACACATTCATCTTCAATTACTCGCTATCCGCGTTAAgacgac                              >  2:608923/1‑143 (MQ=255)
                                                                                                                 ctgaTGGACTCCTTTTTAAACTGCTCCCAGGCAGGCCATGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacg                             <  2:247209/143‑1 (MQ=255)
                                                                                                                   ggtGTAATCCGTTTTACACCGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgac                           <  1:504574/141‑1 (MQ=255)
                                                                                                                   gaggTAATCCTTTTTAAACTGCACCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgac                           <  1:824751/140‑1 (MQ=255)
                                                                                                                     tGTAATCCTTTTTAAACTGCGCCCAGGCAGGCCAGGGACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgacga                         <  1:228930/143‑1 (MQ=255)
                                                                                                                       tAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACt                       <  1:423830/143‑1 (MQ=255)
                                                                                                                        aaTCCCTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGAATGAACACTAAATGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACta                      <  1:847100/143‑1 (MQ=255)
                                                                                                                         aTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGCCGACtaa                     >  1:750551/1‑143 (MQ=255)
                                                                                                                         aTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACtaa                     >  1:507405/1‑143 (MQ=255)
                                                                                                                          tCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTCAGACGACGACGACtaat                    >  1:789679/1‑143 (MQ=255)
                                                                                                                              tgttAAACAGCGCCCAGGCAGGCCAGGTACAGGCAGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATGCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAAtt                <  1:168150/141‑1 (MQ=255)
                                                                                                                                ttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTCTCCGGGTAAAGACGACGACGACTACTAATTCg              >  2:158247/1‑143 (MQ=255)
                                                                                                                                   aaCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAACATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcag           >  2:442939/1‑143 (MQ=255)
                                                                                                                                    aCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCCTCTTCAATTACTCGTTATCCGGGTTAAGACGACAACGACTAAAAATTCgcagc          >  1:470845/1‑143 (MQ=255)
                                                                                                                                    aCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTAAACACTAAAGGCAGCCAGCAGCAGCATCGTCCCGATTCCACCACGCAACACATTCAAAAAAAACTACTCGTTAGTCGGGCAAAGACGCAGACGACTAATAATTCgcagc          >  2:583232/1‑143 (MQ=255)
                                                                                                                                     cTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcagca         >  2:491056/1‑143 (MQ=255)
                                                                                                                                           ccAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCCGCCGCAGCGTCGTCACGATTCCACTACGCAACATATTTAGTTTCAATTAATCGTCCTCTGTGTGAAGACGACGACGACTAATAATTCGCAGCAGACGcc   >  1:121976/1‑143 (MQ=255)
                                                                                                                                           ccAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTCATCCGGGTTAAGACGACGACGACTAATAATTCGCGGCCGACGcc   >  1:503875/1‑143 (MQ=255)
                                                                                                                                            CAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGCCGACTAATAATTCGCAGCAGACGCca  <  2:178303‑M1/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                              
TATCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCA  >  NC_000913/3690039‑3690321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.