New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3690179 = | 53 (1.170) | 3 (0.070) | 3/250 | NT | 5.5% | coding (83/1107 nt) | bcsZ | endo‑1,4‑D‑glucanase |
? | NC_000913 | 3690205 = | 52 (1.210) | coding (57/1107 nt) | bcsZ | endo‑1,4‑D‑glucanase |
TATCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCA > NC_000913/3690039‑3690321 | tgatattgctggcatgggtactgtggcgtctgctgcgaattattagtcgtcgtcgtcttaacccggataacgagtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttcag < 2:745841‑M1/3‑1 (MQ=255) tgatattgctggcatgggtactgtggcgtctgctgcgaattattagtcgtcgtcgtcttaacccggataacgagtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgccttgagtgttcag < 2:661449‑M1/3‑1 (MQ=255) tatCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCcag < 2:109838/143‑1 (MQ=255) tCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCcaggc < 2:533433/143‑1 (MQ=255) attgctggcatgggtactgtggcgtctgctgcgaattattagtcgtcgtcgtcttaacccggataacgagtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttcaggcag < 1:490175‑M1/7‑1 (MQ=255) aCGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGGGATGTTGCGCGCGTCGCTGGGGTCGATGACGCGGCCTTCCTGGCTGATGTAAACCTTTGTGAACTGCTGCCAGGCGGGCCATGTAc > 2:567180/1‑143 (MQ=255) ccgccAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGa > 1:745841/1‑143 (MQ=255) cgccAGGGCGGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGGCGCGCCCTTCCTGACTGATGTACTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGaa < 2:204889/143‑1 (MQ=255) cgccAGGGCAGAGAACATGCCGTTGCTTGGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGaa < 2:579061/143‑1 (MQ=255) gggCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTa > 2:762433/1‑143 (MQ=255) ggCAGAGAACATGCCGTAACTTTGGCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTaa < 2:667774/143‑1 (MQ=255) gCAGAGAACATGCCGTAACTGTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGCTGACGCGCGCTTCCTGACTGATGTAATCCTGTTTAAACTGATCCCAGGCAGGCCAGGGACAGGCCGCCTGAacacagaa > 2:876224/1‑139 (MQ=255) agagAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTATGCGCGCGTCGCTGGGGTCGATGACGCGCCCATCCTGAATGATGTAAACCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCAGAACACTAAAgg > 2:29642/1‑143 (MQ=255) aattagtagtcgtcgtcgtgttaacccggagcacgagtaagtggaggtgaatgggttgcgtagtggaatcgggacgatgcggctgctggctgcctttagtgttCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGcag > 2:731008‑M1/104‑143 (MQ=255) aaCATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGcagc < 1:339113/143‑1 (MQ=255) aggCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGcagccag < 2:743856/141‑1 (MQ=255) ccGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCcagcag > 2:476876/1‑143 (MQ=255) gTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGCCGCTGTGCTCGCTGACGCCCCCTTCCGGTCTGACGCCAGTCTCTTTAAACTCATCCCCCGCCAGCCCCGTACAAGCCCCCCAACCACTAACAGCAACcagcagaa > 2:315544/1‑141 (MQ=255) cTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCAt > 1:296867/1‑143 (MQ=255) ttGCCTTTCGGGGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCg < 2:699369/143‑1 (MQ=255) gCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTc < 1:439138/143‑1 (MQ=255) ccTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCAc < 1:655923/143‑1 (MQ=255) cGGAGGCGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCGCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGAtt < 1:591304/143‑1 (MQ=255) ggAGGTGGTGATTTTGCGCCCGTCGCTGGGGTCGATGACGCGCCCTGCCTGACTGATGTAATCCGTTTGAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGACCACTAAAGGCAGCCAGCAGCAGCCTCGTCACGATTc < 1:573523/143‑1 (MQ=255) aGGTGGGGAGTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCGTCCTGACTGATGTAATCCGTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACGAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCa < 1:259483/143‑1 (MQ=255) gtgATTTTGTGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCCGAACACTAAAGGCAGCCAGGGGCAGCATCGTCACGATTCCGCGACg > 1:504241/1‑143 (MQ=255) aTTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCaa < 1:417346/143‑1 (MQ=255) gtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCagcagcagc > 2:297331‑M1/68‑118 (MQ=255) gtaattgaagatgaatgtgttgcgtagtggaatcgtgacgatgctgctgctggctgcctttagtgttCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCagcagcagc < 1:297331‑M1/51‑1 (MQ=255) gCTGGGGTCGATGACGCGCCCTTCATGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCAACGCCACGAATCCACTACGCAACACAAGCATCTTCa > 2:446853/1‑143 (MQ=255) cTGGGGTCGATGACGCGCCCTTCCTGATTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCaa < 1:172193/143‑1 (MQ=255) cTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATCCATCTTCaa < 1:505472/143‑1 (MQ=255) cTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTCCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCACCATCCTCCCGATGCCCCCCCGCCACCCACTCACCTTCaa > 1:417291/1‑143 (MQ=255) cTGGGGTCGATGACGCGCCCTGCCTGACTGATGTAATCCTTTTTAAACCGCTACAAGGCAGGACCGGTACGGGCTGCCTGAACACTAAAGACACCAACCAGATGCATAGTTTCGGTTCCACTACGCAACACATTCATCTTCaa < 2:360198/143‑1 (MQ=255) cTGGCGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCaa < 1:768390/143‑1 (MQ=255) tGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACCCCTTCATCTTCact > 1:265784/1‑141 (MQ=255) gTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACt < 1:476876/143‑1 (MQ=255) tCGATGACTCGCCCTTCCTGACAGATGTAATCCTTTTTAAACTGCTAGCGGGTAGGCCATCTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTc < 1:202649/143‑1 (MQ=255) tCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCCTCAATGACTc > 2:245576/1‑143 (MQ=255) ctgctGACGCGCCCTTTCCTACGTATGTAATCCTTTTTAGACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTc < 2:348550/139‑1 (MQ=255) gATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCCTCGTCACGCTTCCCCTCCGCCACCCCTTCATCTTCAATTACTCGt > 1:756857/1‑143 (MQ=255) cgcCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCgg < 1:762433/143‑1 (MQ=255) ccTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAga < 1:98651/143‑1 (MQ=255) tgactgaTGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCCTCTTCAATTACTCGTTATCCGGGTTAAgacg > 1:494835/1‑143 (MQ=255) tgacggaTGTAAGCCTGTTTAAACGGCCCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacg < 1:351185/143‑1 (MQ=255) actgaTGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCCCGATTCCACTACGCAACACATTCATCTTCAATTACTCGCTATCCGCGTTAAgacgac > 2:608923/1‑143 (MQ=255) ctgaTGGACTCCTTTTTAAACTGCTCCCAGGCAGGCCATGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacg < 2:247209/143‑1 (MQ=255) ggtGTAATCCGTTTTACACCGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgac < 1:504574/141‑1 (MQ=255) gaggTAATCCTTTTTAAACTGCACCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgac < 1:824751/140‑1 (MQ=255) tGTAATCCTTTTTAAACTGCGCCCAGGCAGGCCAGGGACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgacga < 1:228930/143‑1 (MQ=255) tAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACt < 1:423830/143‑1 (MQ=255) aaTCCCTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGAATGAACACTAAATGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACta < 1:847100/143‑1 (MQ=255) aTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGCCGACtaa > 1:750551/1‑143 (MQ=255) aTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACtaa > 1:507405/1‑143 (MQ=255) tCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTCAGACGACGACGACtaat > 1:789679/1‑143 (MQ=255) tgttAAACAGCGCCCAGGCAGGCCAGGTACAGGCAGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATGCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAAtt < 1:168150/141‑1 (MQ=255) ttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTCTCCGGGTAAAGACGACGACGACTACTAATTCg > 2:158247/1‑143 (MQ=255) aaCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAACATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcag > 2:442939/1‑143 (MQ=255) aCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCCTCTTCAATTACTCGTTATCCGGGTTAAGACGACAACGACTAAAAATTCgcagc > 1:470845/1‑143 (MQ=255) aCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTAAACACTAAAGGCAGCCAGCAGCAGCATCGTCCCGATTCCACCACGCAACACATTCAAAAAAAACTACTCGTTAGTCGGGCAAAGACGCAGACGACTAATAATTCgcagc > 2:583232/1‑143 (MQ=255) cTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcagca > 2:491056/1‑143 (MQ=255) ccAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCCGCCGCAGCGTCGTCACGATTCCACTACGCAACATATTTAGTTTCAATTAATCGTCCTCTGTGTGAAGACGACGACGACTAATAATTCGCAGCAGACGcc > 1:121976/1‑143 (MQ=255) ccAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTCATCCGGGTTAAGACGACGACGACTAATAATTCGCGGCCGACGcc > 1:503875/1‑143 (MQ=255) CAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGCCGACTAATAATTCGCAGCAGACGCca < 2:178303‑M1/143‑1 (MQ=255) | TATCGAAAGCTGCACGGTCGTTAGCCGCCAGGGCAGAGAACATGCCGTAACTTTGCCCTTCGGAGGTGGTGATTTTGCGCGCGTCGCTGGGGTCGATGACGCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCA > NC_000913/3690039‑3690321 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |