New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3322035 =71 (1.560)4 (0.090) 4/254 NT 5.4% intergenic (‑422/+37) yhbX/leuU putative hydrolase, inner membrane/tRNA‑Leu
?NC_000913 3322065 = 72 (1.650)intergenic (‑452/+7) yhbX/leuU putative hydrolase, inner membrane/tRNA‑Leu

TTTATAACTAAGGCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGA  >  NC_000913/3321926‑3322206
                                                                                                                                            |                                                                                                                                             
tttATAACTAAGGCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAACCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGCCCAAAAAGAAAGAAGACGCTTTGCAGCGTCGCTTTTCTggc                                                                                                                                            >  2:347146/1‑142 (MQ=255)
        tAAGGCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGCATTTGGTa                                                                                                                                    >  2:568182/1‑143 (MQ=255)
        tAAGGCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTa                                                                                                                                    <  2:149764/143‑1 (MQ=255)
         aaGGCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGTCAACCATTCCTCAGACCAGGACCAAAACGCAAAAAGACGCTTTTCAGCGTCTCCTTTCTGGAATTTGGGAc                                                                                                                                   >  2:576067/1‑143 (MQ=255)
            gCGTGCCGTCACCATCGTTTCAAGGTTCCAGCTACGAGTAAAGCAATTTGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGa                                                                                                                                <  2:264793/143‑1 (MQ=255)
            gCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTCCTGGGATCTCGTACCGa                                                                                                                                >  2:177395/1‑143 (MQ=255)
             ctgaCCGGCACGATGGTTTCAAGGTACCAGCTACTAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAg                                                                                                                               <  2:252017/140‑1 (MQ=255)
             cGTACCGTCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAg                                                                                                                               <  2:701319/143‑1 (MQ=255)
              ggaCCGGCACCGTCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAgg                                                                                                                              <  2:718180/141‑1 (MQ=255)
               tACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAACTTGGTACCGAGGa                                                                                                                             >  2:661666/1‑143 (MQ=255)
                 ccGGCACCAGCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACg                                                                                                                           <  1:212779/143‑1 (MQ=255)
                  cGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTCTCTGGACTTTGGTACCGAGGACgg                                                                                                                          >  2:262068/1‑143 (MQ=255)
                  cGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCGTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACgg                                                                                                                          >  1:36168/1‑143 (MQ=255)
                   ggCACCATCGTTTCAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGa                                                                                                                        >  2:338240/1‑143 (MQ=255)
                    gCACCATCGTCTCCAGGTACCAGCGACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGa                                                                                                                        <  1:236138/143‑1 (MQ=255)
                      aCCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAACAAAGACGCTTTTCAGCGTCTCTTTTCCGGAATTTGGTACCGAGGACggacct                                                                                                                      >  2:712592/1‑139 (MQ=255)
                      aCCATCGTTCCAAGGTACCAGCTACGAGTAAAGCAACTGGCCGAGATACAGACACCCGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACt                                                                                                                      <  1:539/143‑1 (MQ=255)
                          tCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGaa                                                                                                                  >  2:257104/1‑143 (MQ=255)
                          tCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGaa                                                                                                                  <  1:472931/143‑1 (MQ=255)
                          tCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGAACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGAACTTTGGCAACGAGGACGGGACTTaaa                                                                                                                  >  2:157046/1‑143 (MQ=255)
                          gcGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGaa                                                                                                                  <  2:760174/142‑1 (MQ=255)
                           cGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAGACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAAc                                                                                                                 <  2:52238/143‑1 (MQ=255)
                             tttCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGATTTACAGCGCCCCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAAccc                                                                                                               >  2:30115/1‑143 (MQ=255)
                               tCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGt                                                                                                             >  2:849243/1‑143 (MQ=255)
                                 aaGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGCGACTTAAACCCGTaa                                                                                                           >  1:632406/1‑143 (MQ=255)
                                  aGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGCTAGGTGCCAGCATTTCCTCAGAACCGGACACCACACATAGGAGTTGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAg                                                                                                          >  1:655539/1‑143 (MQ=255)
                                   ggaaCCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGc                                                                                                         >  1:735467/4‑143 (MQ=255)
                                   ggTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGc                                                                                                         >  1:60688/1‑143 (MQ=255)
                                    gTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGCACATAGTACCGAGGACGGGACTTGCACCCGTAAGcc                                                                                                        >  2:182912/1‑143 (MQ=255)
                                    gTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTAAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGACCACGTAAggc                                                                                                        >  2:108092/1‑141 (MQ=255)
                                          gCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGTATTTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTg                                                                                                  >  1:455784/1‑143 (MQ=255)
                                            tACGAGTAAAGCAACTGGACGAGATACAGGTACCTGACACCCATTCCTCAGACCAGGACCAACCCGCGTCTAGTCTCTATTCTGCGTCGGTGTTCTGGAATTTGGTACCGACGACTTGTTTTGAACCCGTAAGCCCTATTggg                                                                                                <  2:188802/143‑1 (MQ=255)
                                             aCGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTGTTGGGc                                                                                               >  1:814357/1‑143 (MQ=255)
                                                 gTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTa                                                                                           >  1:290555/1‑143 (MQ=255)
                                                      gCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTaccacc                                                                                      >  2:601196/1‑143 (MQ=255)
                                                        aaCTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTc                                                                                    <  1:116109/143‑1 (MQ=255)
                                                          cTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTGTTCAGCGTCTCTTTTCTGGAATTTGCTACCGAGGACGGGACTTGCACCCGTAAACCCTATTGGGCACTACCACCTCaa                                                                                  >  2:771653/1‑143 (MQ=255)
                                                           tgtccGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGGCGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAg                                                                                 <  2:344527/139‑1 (MQ=255)
                                                             gACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTCTTCTGGAATTTGGTACCGCGGATGGGACCTGATCCCGTAAGCCCTATCGGGCACTACCACCTCacgct                                                                               >  2:770284/1‑139 (MQ=255)
                                                                gagaTACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAGGGTAGc                                                                            >  1:17933/1‑143 (MQ=255)
                                                                     acagatacCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTc                                                                       <  1:568182/143‑1 (MQ=255)
                                                                       agatacCTGACACCCATTCCTCAGACCAGGACCCAACCTACGTGAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTa                                                                     <  2:629782/143‑1 (MQ=255)
                                                                        gatacCTGACAGCCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTAc                                                                    <  2:875554/143‑1 (MQ=255)
                                                                        gatacCGGACAACCATGCCTCATACCAGGACCAAAACGAAAAAAGACGCTTTCCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTAc                                                                    <  1:152788/143‑1 (MQ=255)
                                                                         atacCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCCTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTATCTAcg                                                                   >  2:415041/1‑142 (MQ=255)
                                                                           acCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCGACCaa                                                                 >  1:186513/1‑143 (MQ=255)
                                                                              tGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGCATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTCCCACCTCACGGTAGCGTGTCTACCAATTc                                                              >  2:790166/1‑143 (MQ=255)
                                                                              tGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTc                                                              >  1:865188/1‑143 (MQ=255)
                                                                                aCAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTcca                                                            <  1:338240/143‑1 (MQ=255)
                                                                                 tcaagtcccgtcctcggtaccaaattccaGAAAAAAGACGCTTTTCAGCGTCTCTTTTCt                                                                                                                                               <  1:235908‑M1/31‑1 (MQ=255)
                                                                                 tcaagtcccgtcctcggtaccaaattccaGAAAAAAGACGCTTTTCAGCGTCTCTTTTCt                                                                                                                                               >  2:235908‑M1/30‑60 (MQ=255)
                                                                                 ccaCCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATGGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTccac                                                           <  1:701361/141‑1 (MQ=255)
                                                                                      aTTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTCGCGTGTCTACCAATTCCACCACCt                                                      >  1:74456/1‑143 (MQ=255)
                                                                                         ccTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCgg                                                   <  2:231215/143‑1 (MQ=255)
                                                                                          cgcAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGc                                                  >  1:757335/3‑143 (MQ=255)
                                                                                           tCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCa                                                 >  1:373479/1‑143 (MQ=255)
                                                                                           tCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATGCCACAACCTCGGCa                                                 >  2:220958/1‑143 (MQ=255)
                                                                                             aGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCCCg                                               >  1:722433/1‑143 (MQ=255)
                                                                                              gACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACgg                                              <  2:60688/143‑1 (MQ=255)
                                                                                               tccAGGACCAAAACGAAAAGAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCGCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGa                                             <  2:651734/142‑1 (MQ=255)
                                                                                               aCCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGTGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGa                                             <  2:439152/143‑1 (MQ=255)
                                                                                               aCCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGa                                             <  1:834221/143‑1 (MQ=255)
                                                                                                 cAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCCCGGAta                                           >  1:764546/1‑143 (MQ=255)
                                                                                                 cAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGAta                                           <  1:716436/143‑1 (MQ=255)
                                                                                                 cAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGAta                                           >  2:198680/1‑143 (MQ=255)
                                                                                                 cAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACAACCAACTTAATGTTGGGTGTCTCCCAATTCCACCACCTCAGCACAGAta                                           >  1:556702/1‑143 (MQ=255)
                                                                                                 cAGAACCAAAACAAAAAAACACGCTTTTCATCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGAta                                           <  1:72720/143‑1 (MQ=255)
                                                                                                           caCGAGAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGTACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACttttt                                  <  2:518845/142‑1 (MQ=255)
                                                                                                            aCGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGTACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTa                                 <  2:561633/143‑1 (MQ=255)
                                                                                                            aCGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTa                                 <  1:849243/143‑1 (MQ=255)
                                                                                                             agaaaagagacgctgaaaagcgtcttttttcTGGAATTTGGTACCGAGGACGGGACTTGa                                                                                                                   >  2:235908‑M2/32‑60 (MQ=255)
                                                                                                             agaaaagagacgctgaaaagcgtcttttttcTGGAATTTGGTACCGAGGACGGGACTTGa                                                                                                                   <  1:235908‑M2/29‑1 (MQ=255)
                                                                                                              GAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCCCGGATACTACTTTTTagg                               <  1:774688‑M1/143‑2 (MQ=255)
                                                                                                              GAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGCAGCGAGTCTGACAATTGCACCACCCCGCCACGGATACTCCCTTTTaga                               <  2:409707‑M1/143‑2 (MQ=255)
                                                                                                                aaagagacgctgaaaagcgtcttttttcTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTc                             >  1:780052‑M2/29‑143 (MQ=255)
                                                                                                                  AAAGCCGCTTTGCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCgg                           >  1:753398‑M1/1‑143 (MQ=255)
                                                                                                                   gagacgctgaaaagcgtctcttttcTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCggg                          >  2:746401‑M2/26‑143 (MQ=255)
                                                                                                                   caGACCCATTTCGGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCggg                          <  2:766817/142‑1 (MQ=255)
                                                                                                                      aCGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGata                       <  1:389385/143‑1 (MQ=255)
                                                                                                                        gCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGttatt                     >  1:24172/1‑142 (MQ=255)
                                                                                                                        gCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAAGACGGGGCTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCCCGTCCACCACCTCGGCCCGCATACGCCTTTTTAGTTCtggctgtc                     >  1:286121/1‑138 (MQ=255)
                                                                                                                            ttCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTg                 >  1:674072/1‑143 (MQ=255)
                                                                                                                                  gTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTCCTTTCTAGTTCGGGATATCGCTGGTCGGc           >  2:617965/1‑143 (MQ=255)
                                                                                                                                    ctctTTTCTGGTATTTGGTACCGAGGACGTGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCtt         <  2:496940/143‑1 (MQ=255)
                                                                                                                                     tctTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCttg        >  1:428038/1‑142 (MQ=255)
                                                                                                                                      ctTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAg       <  1:182912/143‑1 (MQ=255)
                                                                                                                                           cTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGa  <  2:865188‑M2/142‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                             
TTTATAACTAAGGCGTACCGGCACCATCGTTTCAAGGTACCAGCTACGAGTAAAGCAACTGGACGAGATACAGATACCTGACAACCATTCCTCAGACCAGGACCAAAACGAAAAAAGACGCTTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGA  >  NC_000913/3321926‑3322206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.