New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	572405 =	1266 (19.420)	11 (0.220) +AGCGTTTGACCTCTGCGGAGGGGAAGCGTGA	9/220	5.0	1.1%	coding (38/102 nt)	ylcH	DLP12 prophage; uncharacterized protein YlcH
	?	NC_000913	= 1095504	NA (NA)					intergenic (‑67/‑40)	insE‑4/ymdE	IS3 element protein InsE/protein YmdE
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAA  >  NC_000913/1095363‑1095646                                                                                                                                               |                                                                                                                                               cgtCAGGGCTTCGCTGCGGAATTCGGGCGAGTGCTGTTTACGGGGTTTTTTGCTGGTTGATACTGTGTGTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTg                                                                                                                                               <  2:805542/141‑1 (MQ=11)    cAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCt                                                                                                                                            <  1:161703/143‑1 (MQ=33)     aGGGCTTCACTGCGAAATTCAGGCGAATGCTGTATGCGGGGTGTCGTGCTGGTTGATACTGTGTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACCATTGCGGGGTAA‑GATCAGTGctcg                                                                                                                                           >  2:856682/1‑140 (MQ=11)      gggCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTgg                                                                                                                                          >  2:864003/1‑143 (MQ=35)      gggCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTgg                                                                                                                                          >  2:788101/1‑143 (MQ=35)       ggCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTGACTTAGCCGCGTGTCCGCTATTGCTGGGTAA‑GATCAGTGCCTGGc                                                                                                                                         >  1:394662/1‑143 (MQ=25)       ggCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGc                                                                                                                                         <  1:1092860/143‑1 (MQ=35)        gCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGca                                                                                                                                        >  2:775905/1‑143 (MQ=37)          ttCACTGCGATATTCGGGCGAATGCTGTTTTCGGGGTTTTTTACTTGTTGATACTGTTTTTGTCATGTGAGTCGCCTCGGACTGAGAGTGTACTCACTTAGCGGCGTGTCCACTTTTGCTGGGTAA‑GATCAGTGCCTGGcaca                                                                                                                                      <  2:510113/143‑1 (MQ=14)          ttCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCATTGCCTGGcaca                                                                                                                                      >  2:782185/1‑143 (MQ=37)          ttCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGcaca                                                                                                                                      >  2:496921/1‑143 (MQ=38)          ttCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGGTGTTTACTGGTTGATACTGTGTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGcaca                                                                                                                                      >  1:839339/1‑143 (MQ=255)               tGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGt                                                                                                                                 <  1:787809/143‑1 (MQ=255)               tGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGAACACGCGt                                                                                                                                 <  1:1081726/143‑1 (MQ=255)                  gAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCAGGGTAA‑GATCAGTGCCTGGCACACGCGTTTg                                                                                                                              >  2:375147/1‑143 (MQ=255)                     agtCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATg                                                                                                                           <  1:254831/141‑1 (MQ=255)                     aTTCTGTCGTATGCTGTTTACGTGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGTGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATg                                                                                                                           <  2:921440/143‑1 (MQ=17)                        cAGGCTACTGCTCTGTACGGCGTTTTCTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGaa                                                                                                                        <  1:113032/143‑1 (MQ=17)                        cAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGaa                                                                                                                        <  1:979511/143‑1 (MQ=255)                        cAGGCGAATGCTGTTCACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGATTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGaa                                                                                                                        <  1:983025/143‑1 (MQ=255)                         aGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCGGGCACACGCGTTTGCTGGAAg                                                                                                                       >  1:691593/1‑143 (MQ=255)                         aGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTGTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATAAGTGCCTGGCACGCCCGTGTGATTGAAg                                                                                                                       >  2:31665/1‑143 (MQ=14)                              aaTGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGc                                                                                                                  <  1:406317/143‑1 (MQ=255)                                  cTGTTTACGGGGTTTTGTACTGGTTGATACTGTTTTGGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTc                                                                                                              <  1:406631/143‑1 (MQ=255)                                  cTGTTTACGGGGTTGTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTc                                                                                                              <  1:404870/143‑1 (MQ=255)                                   tGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCa                                                                                                             <  1:775905/143‑1 (MQ=255)                                   tGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCa                                                                                                             >  2:1191231/1‑143 (MQ=255)                                     tttACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAgg                                                                                                           <  1:202030/143‑1 (MQ=255)                                     tttACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCGCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAgg                                                                                                           <  1:116158/143‑1 (MQ=255)                                                 tttACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGAtt                                                                                               <  1:208146/143‑1 (MQ=255)                                                      tGGTTGATACTGTTTTTGCCATGTGAGTCAACTCTGACTTAGAGTTTACTCATTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACCCGAGCTTGATCGAAGCAGGCGATGAGGCAGTGCGCGagcatgtc                                                                                          >  2:108428/1‑136 (MQ=14)                                                                ttgtgttGCCATGCGAGTCGCCCCTGACGGAGAGCTTACTCACTGCGCCGCGTGTCCACGATCGCTGGGCAA‑GAGCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTgg                                                                                <  2:358818/138‑1 (MQ=255)                                                                tGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTgg                                                                                >  1:745114/1‑143 (MQ=255)                                                                    tttGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATATTGCCGGACTGGatat                                                                            >  1:628488/1‑143 (MQ=255)                                                                                gTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCaga                                                                >  2:296867/1‑143 (MQ=255)                                                                                  cACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGCTGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACCGGATCTCGCTCCCCCAGAGc                                                              >  2:20549/1‑143 (MQ=37)                                                                                   aCCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTAACGAGAAAGGATATTTTGGTGGC‑CGCACCCCGGAGTCAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCa                                                             >  1:1198399/1‑143 (MQ=12)                                                                                      tctGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTACTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCa                                                          >  2:267540/1‑143 (MQ=255)                                                                                          acggggagTTTACTCGCTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCCTCGCCAGAGCATCAGGtt                                                      <  2:1139935/138‑1 (MQ=255)                                                                                            tgaGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCACCAGGTTCt                                                    >  1:364888/1‑143 (MQ=255)                                                                                              actgTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCtga                                                  <  1:828829/140‑1 (MQ=255)                                                                                               gagTTTGCTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCtgat                                                 <  1:551078/143‑1 (MQ=255)                                                                                                 gTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGACGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGCACTGGATATCGCTTCCGCAGGGCATCAGGTTCtgatgc                                               >  1:830602/1‑142 (MQ=38)                                                                                                  ttttCTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGCTATCGCTTCGCCAGAGAATCAGGTTCggattga                                              >  2:1060098/1‑140 (MQ=38)                                                                                                  tttACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGaa                                              >  2:554383/1‑143 (MQ=255)                                                                                                   cggcgaaCTGAGCCGCGTGTCCACTGTTGCTGGGTAA‑GATCCGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAAc                                             <  1:1075162/137‑1 (MQ=255)                                                                                                    tACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGCGCATCAGGTTCTGATGAACg                                            >  2:308583/1‑143 (MQ=255)                                                                                                    tACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATAGCTTCGCCCGAGCATCAGGTTCTGATGAACg                                            >  2:821777/1‑143 (MQ=255)                                                                                                       tcacggggCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGGGCCTGGCACACGCGGTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTaa                                         <  1:933671/136‑1 (MQ=255)                                                                                                       tCACTTGGCCGCGTGTCCACCATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTaa                                         <  1:33831/143‑1 (MQ=255)                                                                                                         aCTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGACTCTCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGGTCTGATGAACgccaaa                                       >  2:518836/1‑138 (MQ=255)                                                                                                         aCTTAGCCGCGTGTCCACTATTGCTGGGGAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACa                                       <  1:496921/143‑1 (MQ=255)                                                                                                          cTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATGATCTTGCCGGACTGGATATCGCTTCGCCAGAGCAGCCGGGTCTGAAGAACGGAACAg                                      >  2:67020/1‑143 (MQ=39)                                                                                                                cgcgTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGCTGTAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCaaaaa                                <  1:1191231/143‑1 (MQ=255)                                                                                                                  cgcgtCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGc                              <  1:390676/140‑1 (MQ=255)                                                                                                                     gtCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAg                           >  1:1025561/1‑143 (MQ=255)                                                                                                                       ccACTCTTGCTCCGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGt                         <  1:167313/143‑1 (MQ=255)                                                                                                                        cacttgtGCTGGGTGA‑GATCAGTGCCTGGCACGCGCGTTTGATGGGAGACGGCGTTCAGGCAATGCGCGCTTATCTTGTCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTc                        <  2:1109510/137‑1 (MQ=255)                                                                                                                        cACTATTGTCGGGCAA‑GATGAGCGGCTGCCACACGCGTTTGCTGGAAGACGGCGTGCAGGCAATGCGCGATTATCTTCCCGGACTGGATATCGCTTCGCGAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTc                        <  1:1109247/143‑1 (MQ=255)                                                                                                                            aTTGCTGGGTAA‑CATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTc                    <  1:113766/143‑1 (MQ=255)                                                                                                                             ttGCTGTGTAA‑GATCAGTGCCTGCCACACGCGTTGGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCTGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTcc                   <  2:979201/143‑1 (MQ=255)                                                                                                                                cTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGCTCTGCTGACCGTCACAGCACAAAGCGAGGTCGGCCCGTc                >  2:937780/1‑143 (MQ=255)                                                                                                                                 tGGGTAA‑GATCAGTGCCTGTCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCa               <  1:680676/143‑1 (MQ=255)                                                                                                                                 tGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGTTCGCTCCGTCa               >  1:138451/1‑143 (MQ=255)                                                                                                                                  ggggAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCaa              <  1:667647/143‑1 (MQ=255)                                                                                                                                   ggTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGGTGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAAt             <  1:282831/143‑1 (MQ=255)                                                                                                                                   ggTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAAt             <  1:481183/143‑1 (MQ=255)                                                                                                                                      aa‑GCTCAGTTCCTGTCACACGCTTTTGTTGGAAGACGGCGTTCAGGCAATGCGCGATTATCGTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACCTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTAt          <  2:168614/143‑1 (MQ=255)                                                                                                                                      aa‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTAt          <  2:596410/143‑1 (MQ=255)                                                                                                                                       a‑GATCCGTGCCTCGCACACGCGTTTGACGGAAGACGGCGTTCAGGCAAGGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATc         <  1:897717/143‑1 (MQ=255)                                                                                                                                       a‑GATCAGGGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAGAAGCGAGGTCGCTCCGTCAATTATc         <  1:595975/143‑1 (MQ=255)                                                                                                                                         gATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCGAGAGGATCAGGTTCTGATGAACGTCACAGCAACACGGGAGGGCGCTCCGTCacgtctcg        >  1:295664/1‑136 (MQ=255)                                                                                                                                          aTCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAGAGCGAGGTCGCTCCGTCAATTATCaa       >  1:1101493/1‑143 (MQ=255)                                                                                                                                           tCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCaaa      <  1:78332/143‑1 (MQ=255)                                                                                                                                              gTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGAAATCGCATAGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGaa   >  1:532629/1‑143 (MQ=255)                                                                                                                                               tGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAAGAGCAAAAAGCGAGGTCGCTCCGTCAATTAACAAAGaaa  >  2:996183/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                               CTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAA‑GATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAA  >  NC_000913/1095363‑1095646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.