Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,123,110 | G→A | P77L (CCA→CTA) | ftsN ← | cell division protein FtsN |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,123,110 | 0 | G | A | 97.6% | 111.8 / NA | 42 | P77L (CCA→CTA) | ftsN | cell division protein FtsN |
Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (24/17); total (24/18) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.29e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTGGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAG > NC_000913/4122970‑4123242 | gTTCAAGCAGCTGACGTTGGTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTtagt < 2:1069229/143‑1 (MQ=255) tCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTtagtgg < 1:1114237/143‑1 (MQ=255) aagaagCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTa > 2:432096/1‑143 (MQ=255) tGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACGACCGGCTGGAGGTTCTGTGGGCGCGGGGGCTCTCTGCTGGCGCCTTGCTGGCTGTTTTATGGGGCGCCAGCGTTCTCCTGGTTTTAGTGTTGGTCCGtt > 2:160906/1‑143 (MQ=255) gttgttCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTTGCGACTGCCCAGCTCTCTAATGTAGCGCCAGCGTGTTTCTCCTTTTAGTGATAGTCCGTTTCCg > 2:1033035/1‑143 (MQ=255) ttCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTACCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCGGCGCGCTGCTGGTTTTAGTGGTCGTCCGTTGcccggcc > 2:833067/1‑138 (MQ=255) gtCTGGTGTCAGTTGCTCCGGCGTGTTCACTGCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTGTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCa < 2:1129333/142‑1 (MQ=255) tgtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCt < 1:1056068/143‑1 (MQ=255) gtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTg < 2:514701/143‑1 (MQ=255) gtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTg > 1:514701/1‑143 (MQ=255) tCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCTGTCACTTTCTgg > 1:534328/1‑143 (MQ=255) tGCTCTGCCGTTATCATTTCTCTACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTg < 2:961710/143‑1 (MQ=255) ttttCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCTtctct > 1:329676/1‑142 (MQ=255) ttttCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCg > 1:485363/1‑143 (MQ=255) ttcacttcacCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTGTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGa > 1:103760/1‑143 (MQ=255) acttcacCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGCTTTAGTGGTAGTCCGTTTCCGGTCACCTTCTGGCTTTGCAGCGtctctgccca > 2:956250/1‑137 (MQ=255) cttcacCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGACAGCGTTCTTCTGGGTTTAGTGGTAGTCCGTTTACGGACACTGTCTGGCCTGGCAGCGTCTGGGActgt > 1:216503/1‑141 (MQ=255) tcacCACCGGCAGATGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACtcttc < 1:838041/143‑1 (MQ=255) cctctgcGGCCGAGGTTTCTGGGGGCGGACGGTCTCCCGTGTGGGGACTTTCCAGCTCTTTGGTGTGGCGGCGGCGGTCTTCTGGTTTTAGTGGTAGTCCGTGTCCGGTCACTTGCTGGCTGTGCAGCGTCTCGGACtcttct < 2:704909/137‑1 (MQ=255) caccGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCGTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACtcttggttg > 1:480652/1‑138 (MQ=255) ccGGCAGAAGGTTCTGTGGGCGCACGCACGCCCGGCTGGTGTCTTTCCAGCTCTGTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTtctttctt < 2:869830/143‑1 (MQ=255) ggccggaGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTACTGTCGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTTACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTtgt < 2:303259/137‑1 (MQ=255) aaGGTTCTGTGGGCGCACGCACGCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGc < 1:432096/143‑1 (MQ=255) tgtgGTCACACGCGCTCCCGGCTGGCGTCTTTCCAGCTCTTTAATGTAGCGCCATCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGa < 2:889719/143‑1 (MQ=255) gtgGGCGCACGCACTCTCGGCAGGCGAATTGCCAGCTCTGTAATGTAGCGCCAGCGTTCTTCCGGTTTTAGGGGTAGTCCTTTTCCGGTCACTTTCTGGCTTTGCCGCGTCACGCACTCTCACTGCGTGTGAAGCGTatcgga > 2:692280/1‑138 (MQ=255) gggCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGt < 1:918392/143‑1 (MQ=255) ggCGCACGCGCGCCCGTCTGGCGACTTGCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTGTAGTGCTAGTCCGTTACCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTa < 2:17678/143‑1 (MQ=255) cgcacggcCCCCCGGCTGGCGACTTTCCAGCTCTTTGGTGTGGCGCCAGCGTTCTTCGGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGGCTCGGACTCTTCTTTCCTGTGATGCGTAATGAAGTACa < 2:399262/143‑1 (MQ=255) cgcacgcaCTCCCGGCTGGCGACTCTCCAGCGCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACa < 2:745344/143‑1 (MQ=255) acgcacTCCCGGCTGGCGACTTTCCAGCTCTTTATTGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGac < 1:710327/143‑1 (MQ=255) acgcacTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTCGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGac > 1:909789/1‑143 (MQ=255) acgcacTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGTTGCGTACTGAAGTACAgcc > 2:191829/1‑141 (MQ=255) tttCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTCTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCCCGGAGTCTTCTCGCTTGTGCTGCGCAGTGAAGTGCAGACCCCCGCTATAGGGcacacgc > 2:335764/1‑140 (MQ=255) tCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTCCAGACAACCGATAAAGGTCACaacaac > 1:185596/1‑143 (MQ=255) tCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAAc < 1:1199918/143‑1 (MQ=255) cctgCTCTTGAATGTAGCTCCAGCGTGCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTGGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAAcg < 2:239419/140‑1 (MQ=255) cAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACGACCGATGAAGGTCACAAGAAcgg > 1:677365/1‑143 (MQ=255) aGCTCTTTAATGTAGCGCCAGCGTTCTTCNGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTCCAGGCCACCTATACAGGTCGCAAGAAcggc > 1:1190420/1‑143 (MQ=255) tttAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAGTGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGgcag > 1:550399/1‑143 (MQ=255) aTGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTACTGATGTACAGACCACCGATAAAGCTCACAATACcggcgggaccagg > 1:924311/1‑136 (MQ=255) aTGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGACGGCAGCAAt > 1:1045382/1‑143 (MQ=255) ccAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGCCCACCGATGAAGGTCACACGAACGGCGGCAGCAACGGCGGCCa > 2:399241/1‑143 (MQ=255) gTTCGTTTGGTTTTGGCGTGAGTCCGTTTCGGGTCACTTGCTGGCTTTGCGGCGTCTCGGACTCTGCTTTCTTGTGATGTGTAATGAAGTAGAGACCACCGAGAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCg < 2:106718/143‑1 (MQ=255) ttctGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGgag > 1:1096939/1‑143 (MQ=255) | GTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTGGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAG > NC_000913/4122970‑4123242 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |