| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4189862 = | 30 (0.920) | 3 (0.100) | 3/254 | NT | 9.5% | coding (77/540 nt) | yjaZ | conserved protein YjaZ |
| ? | NC_000913 | 4189894 = | 28 (0.890) | coding (109/540 nt) | yjaZ | conserved protein YjaZ | |||||
AACTAATTGAGTCAAACTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAA > NC_000913/4189720‑4189983 | ggtgctggcagaagggacgagattctttaggcgcgtggtacattaacgattgtttttcttcgttcgtctgatgttcataatcttttgtgaatcagtgaagagagtaggtaacccaaaagcgatcccctctaggccctttcccc < 1:153020‑M1/1‑1 (MQ=255)aaCTAATTGAGTCAAACTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGc > 1:377148/1‑143 (MQ=255) tgctggcagaagggacgagattctttaggcgcgtggtacattaacgattgtttttcttcgttcgtctgatgttcataatcttttgtgaagcagtgaagagagtaggtaacccaaaagcgatactctaaaggctctttgccCtc > 1:491408‑M1/141‑143 (MQ=255) tAATTGAGTCAAACTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTGTTGATGCtca > 2:515588/1‑143 (MQ=255) gAGTCAAACTTGGCACGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGCAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGCTTCTCATCCgg > 2:61548/1‑143 (MQ=255) gTCAAGCTCGGCAGGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCt < 2:384295/143‑1 (MQ=255) gTCAAACTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACCGGAAGTGGAAAAGTGGCGACCTTTTGGACATACGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCt > 2:169663/1‑143 (MQ=255) tCAAACTCAGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTAGCGGATGCATATATAGCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTg > 1:470577/1‑143 (MQ=255) aaaCTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATTCTCATCAGGCTGTc > 2:209918/1‑143 (MQ=255) aCTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCAGATGGTGATATTCGTGATTTATCATTACTTGATGGTAATCATGCGGTcga > 2:36751/1‑141 (MQ=255) gCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCGTTTGGACATCCGGATGGAGATATTCGTGATTTATCATTTCTTGATCCTCATCGGGCTGTCTACGTTc > 1:594270/1‑143 (MQ=255) aaGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAg > 2:246215/1‑143 (MQ=255) ctgtttCGATCCTATTGCTGTGTAACTTTCTTAAGGAACTAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGc < 1:464307/139‑1 (MQ=255) gATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGcat > 1:343955/1‑143 (MQ=255) ttCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGcatca < 1:447919/143‑1 (MQ=255) aCTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAggg < 1:165926/143‑1 (MQ=255) gtagtacattaacgattgtgtttgttcgttcgtcagatgttcagaaccttgtgtgaagcagtgaagagagtaggtaacccaaaagcgatactctaaaggctctttgccCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGc > 1:327787‑M1/109‑143 (MQ=255) atcTTTCTCAAGGTCCGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTa < 1:41425/141‑1 (MQ=255) aaCTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTa < 1:488362/143‑1 (MQ=255) cgtgctgaaGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTaga < 2:606234/136‑1 (MQ=255) ttAAGGAACGAGAATAAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATc < 1:66456/143‑1 (MQ=255) aaCGCGCATGAACCAGCAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCtttt < 1:171048/143‑1 (MQ=255) aaCGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCtttt < 2:151491/143‑1 (MQ=255) cGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTgg < 1:129172/143‑1 (MQ=255) gAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGGTACCt > 1:550967/1‑143 (MQ=255) gAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTATTGGGTTACCt > 1:232064/1‑143 (MQ=255) atcAGGGAGTGGAAAGGTGGGGACCGTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCGTGAGGGCAAAGAGCCTTTAGAGTAGCGCTTTTGGGTTACCTAc < 2:30474/141‑1 (MQ=255) aCAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTAct < 1:542131/143‑1 (MQ=255) gAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTg < 1:115238/143‑1 (MQ=255) gTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAGGATCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTcc > 1:206930/1‑142 (MQ=255) aTCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACAt < 1:477965/143‑1 (MQ=255) ccGGATGGTCATATCCGTGATTTATCATGTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCa < 1:637359/143‑1 (MQ=255) ttCGTGATTTATCACTTCTTGATGCTCATCAGGCTGTCTCCTTTCAGCATCATGAGGGCAAAGTGCCTTTCGTGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACgaagaa < 2:561409/143‑1 (MQ=255) tCGTGATTTATCATTTCTGGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGaaa < 2:446882/143‑1 (MQ=255) gTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAACGATTATGAACATCAGACGAACGCAGaaaac > 2:422985/1‑142 (MQ=255) taaaggctctttgccCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTa < 2:198256‑M1/47‑1 (MQ=255) taaaggctctttgccCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTa > 1:198256‑M1/16‑62 (MQ=255) | AACTAATTGAGTCAAACTCGGCAAGGATTCGATACTATTCCTGTGTAACTTTCTTAAGGAACGAGAATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAA > NC_000913/4189720‑4189983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |