New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4252303	51 (1.110)	3 (0.070)	3/246	NT	5.6%	intergenic (+20/‑203)	yjbI/ubiC	pentapeptide repeats‑containing protein YjbI/chorismate lyase
	?	NC_000913	= 4252317	53 (1.240)					intergenic (+34/‑189)	yjbI/ubiC	pentapeptide repeats‑containing protein YjbI/chorismate lyase

ACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4252154‑4252303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaccgtCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCTGAGTAAG  <  NC_000913/4252317‑4252176                                                                                                                                                                                                                                                                                                      ACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACA                                                                                                                                                       >  1:894900/1‑143                         TACTCAGGAAACACTTTGCAGCTCCAAATCTCTTGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTCCAGGATGCCAGGAACG                                                                                                                               <  2:354999/143‑1                                       TTTTCAGCTCCAAAGCGCATGGTAAATAGGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTCCAGGATGCCAGGAACGGTGATGTTTTCCTT                                                                                                                 <  1:746222/143‑1                                                                     CGCTTTCCCCCATTTTTGCTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATG                                                                                   <  1:320032/143‑1                                                                                                                                               atcgtCGTCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCGTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCT         <  2:240564/138‑1                                                                                                                                                TCACCGTCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCTG        >  2:139299/1‑143                                                                                                                                                 CACCGTGCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATCGGGCAACCCGCCTCATCATCCCGATATTTGGAGCTGAAAAGTGTTTCCTGA       <  1:426119/143‑1                                                                                                                                                    CGTCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCTGAGTA    >  2:777272/1‑143                                                                                                                                                     GTCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCTGAGTAA   <  1:678030/143‑1                                                                                                                                                      TCCAGGATGCCAGGAACGGTGAAAATATCCGTTGCTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCTGAGTAAG  >  2:324934/1‑143                                                                                                                                                                                                                                                                                                      ACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4252154‑4252303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaccgtCCAGGATGCCAGGAACGGTGATGTTTTCCTTTACTTAAACACCCTTATTCATTATACGATGAGCTCGCCAACTCGCAGTAAAAATGGGGAAAAGCGCATATTTACCATGAGATTTGGAGCTGAAAAGTGTTTCCTGAGTAAG  <  NC_000913/4252317‑4252176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.