| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2731065 = | 40 (0.870) | 5 (0.120) | 4/248 | NT | 11.7% | noncoding (93/1542 nt) | rrsG | 16S ribosomal RNA |
| ? | NC_000913 | 2731083 = | 38 (0.880) | noncoding (75/1542 nt) | rrsG | 16S ribosomal RNA | |||||
GGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCAC > NC_000913/2730923‑2731207 | aataccaagtctcaagagtgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagg < 2:9893‑M1/1‑1 (MQ=255)aataccaagtctcaagagtgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagg > 1:479806‑M1/143‑143 (MQ=255) acaTCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACTTTTTGCGGTACCAACTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAagc < 1:418359/143‑1 (MQ=11) caagtctcaagagtgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgttcgcggcaggcctaacacatgcaagtcgaacggtaacagGAagca < 2:359447‑M1/6‑1 (MQ=255) caagtctcaagagtgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggccggccgaacacatgcaagtcgcacgggaacagGAagca < 1:107526‑M1/6‑1 (MQ=255) caagtctcaagagtgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgcacggtaacaggacaca < 1:624783‑M1/6‑5 (MQ=255) aagtctcaagagtgaacacgtaattcattacgaagtttaatactttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagGAagcag < 2:798848‑M1/7‑1 (MQ=255) gtgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagGAAGCAGCAAGCTGCTTc > 2:189518‑M1/126‑143 (MQ=255) agagGCCTGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGCTATCCCCCTCCATCAGGCAGCTTCCTAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTc < 2:873785/143‑1 (MQ=255) tgaacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagGAAACAGCAAGCTGTTTcc > 1:618208‑M1/125‑143 (MQ=255) aacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagaatgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagGAAGCAGCAAGCTGCTTCCTg > 1:574247‑M1/123‑143 (MQ=255) aacacgtaattcattacgaagtttaattctttgagcatcaaacttttaaattgaagagtttgatcatggcgcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagGAAGCAGCAAGCTGCTTCCTg > 1:257158‑M1/123‑143 (MQ=255) gctggAAGTTCCCCCTCTGTGGTCGTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTAGCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGt < 2:262720/139‑1 (MQ=14) cccGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCCGCAATCTGCTTCCTGtt > 1:699653/1‑143 (MQ=255) ccccTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGAc > 2:7146/1‑143 (MQ=40) ctctTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGACGCAGCCAGCTGCTTCCTGTTACCGTTCGACTTg > 1:796499/1‑143 (MQ=255) ttttGTCGTGCGACATTAGGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCAt < 1:753013/143‑1 (MQ=255) ttGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCTTTCGACTTGCAtg > 1:148139/1‑143 (MQ=255) gTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTCCGACTCGCaggggt > 2:52768/1‑138 (MQ=255) gTCGTGCGACAGTATTCGGTATGAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATgtgt < 2:439562/143‑1 (MQ=255) aattctttgagcatcaaacttttaaattgaagagtttgatcatggctcagattgaacgctggcggcaggcctaacacatgcaagtcgaacggtaacagGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTa > 1:745647‑M1/99‑143 (MQ=255) tATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTGCCGTTCGCCTTTCATGTGTTCGGCCTgccgc > 1:129004/1‑143 (MQ=255) ggTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCg < 2:241597/143‑1 (MQ=38) gTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCCGACATTGCTCACCCGCCAGCCACTCGTCAGCGAAGCAGCAAGCTGCTTACTGCTACCGTTCGACTTGCATGAGTTAGGCCCGCCGCCAGCGt > 2:107526/1‑143 (MQ=11) gTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTCGGCCTGCCGCCAGCGt > 1:852566/1‑143 (MQ=255) tATTAGCTACCGGTTCCAGTAGTTAGCCCCCTCCATCAGGCAGCTTCCCAGACATGACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGtt < 2:280471/143‑1 (MQ=255) aTTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTc < 1:159379/143‑1 (MQ=38) cTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTCCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCt > 2:503127/1‑143 (MQ=38) aCCGTTTCCAGGAGTGATCCCCTTCCATCATGGAGCGTCCCAGACATTACTCACCCGTCGGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGa < 2:676666/143‑1 (MQ=11) tttCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCa > 1:739977/1‑143 (MQ=38) agtagtTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCACTCTGAGCCaggctc > 1:686430/1‑138 (MQ=255) agtTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCaaa < 2:377352/143‑1 (MQ=38) ttATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCCGCCAGCTGCTTCCTGTTACCGTTCCACTTTCCTGTGTTCGCCCTGCCGCCAGCGTTCAACCTGAGCCATCCTCAAAct > 1:724436/1‑143 (MQ=11) aTCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTc > 1:400550/1‑75 (MQ=255) aTCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTc < 2:400550/75‑1 (MQ=255) tCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCCTGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCtt > 1:803598/1‑143 (MQ=255) ccccTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTGGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCa > 1:359447/1‑143 (MQ=38) ccccTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGACATGATAAAACTCTTcg > 1:714883/1‑142 (MQ=255) cccTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCaa > 1:756928/1‑143 (MQ=38) cTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGGGTTGGGGGGCGGAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAAtt > 1:206165/1‑143 (MQ=14) ttCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGCTCAAACTCTTCACTTTAAAAGTTtgctgc > 2:838437/1‑143 (MQ=255) ttCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGc > 1:798848/1‑143 (MQ=35) ccAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCa > 2:788036/1‑143 (MQ=35) cAGACACTACGCACCCGTCCGCCACTCGGCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCTAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCaa < 1:109044/143‑1 (MQ=255) aGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGGGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCCATTTAAAAGTTCAATGccccac > 2:371324/1‑138 (MQ=11) cATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCGGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGaa > 1:469733/1‑143 (MQ=21) aTTACTCACCAGTCTGAAACTCGTCAGCAAAGCCGCTAACTGCAGCCTGTTACCCTTAGACTTACCAGTGTTAGGCCTGCCCCCAGCGTTCAATCTGAGCCATGATCAAACTCTCCACTTTAAAAGTTTGCTCCTCACAGAAt > 2:153443/1‑143 (MQ=2) cTCCCCCGTCCGCCACGCGTCAGCGGAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTAAACGGATGaaa < 2:607220/143‑1 (MQ=11) tCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGCTCGACTTGAATGTGTTAGGCCTGCAGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTCAAAAATTTGATACACAAAAAATTaaaa > 2:149510/1‑142 (MQ=11) cccGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTCTTAGGTCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTc < 2:888842/143‑1 (MQ=25) ccGTCCGCCACTCGTCAGCGCAGCAGCAAGATGCTTCCTGTTACCATTCGAATCGCATGTGTTAGGCATGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGCTGCTCAGAGAATTAAACTTCg > 1:404250/1‑143 (MQ=11) cGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGt < 1:788036/143‑1 (MQ=35) ggcAGCGAAGCAGCAAGCTGCTTCCTGCTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAATTACgt < 2:135579/141‑1 (MQ=21) gCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTCCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATCAATTACGTGTTc > 2:128770/1‑143 (MQ=25) cGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCa > 2:449716/1‑143 (MQ=35) GAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCAc < 1:592569‑M1/143‑1 (MQ=255) | GGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCAC > NC_000913/2730923‑2731207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |