| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,113,548 | T→C | 8.5% | intergenic (+142/‑31) | opgH → / → yceK | osmoregulated periplasmic glucans (OPGs) biosynthesis protein H/DUF1375 domain‑containing lipoprotein YceK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,113,548 | 0 | T | C | 8.5% | 177.3 / 7.6 | 71 | intergenic (+142/‑31) | opgH/yceK | osmoregulated periplasmic glucans (OPGs) biosynthesis protein H/DUF1375 domain‑containing lipoprotein YceK |
| Reads supporting (aligned to +/- strand): ref base T (37/28); new base C (3/3); total (40/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.26e-02 | |||||||||||
CGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAATATTATCCCGGTGTGC > NC_000913/1113410‑1113690 | cGTGGTTGCGGGATGCGCGACGCTTAGCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCg < 1:361060/143‑1 (MQ=37) ttGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTGTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAtt < 2:416047/143‑1 (MQ=255) gtcttaTGCGCTACGCGAATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAtttt < 1:239356/138‑1 (MQ=255) gCCTGATGCGCTACGCTTAGCAGGCCTACAGCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCATAACGCCGGTAtttt < 1:383643/143‑1 (MQ=25) ccTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCATAACGCCGGTAttttt < 2:700494/143‑1 (MQ=255) cTGATACGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGAGTTATGCCGGCGtttttt > 2:852744/1‑143 (MQ=255) cgcTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAATCATACCGGCGTTTTGTCGGCACTATATTACGaa > 1:119532/1‑143 (MQ=25) cTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGCTAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCACTAACATTCCCGGCTTTATGCAGGGATTTTTTTACGAAag > 1:572329/1‑143 (MQ=37) cTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAag > 1:55653/1‑143 (MQ=255) gCTTATCAGGCCTACATCGTCCCTGCAATTTATTGATTTTGCAAGACTGCGTGGGTCGGATAAGTCGTTCACGCCGCATCCGGCAAAAACAACTAGCCAATAAAACTACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGt < 2:499407/143‑1 (MQ=38) ccTTACCGGGCCTACATCGTTCCTGCAAGTTATTGCTTTTGCCAGACTTGGTGGGTCGGAGAAGGCGTTCACGCCGCATCCGGTAAAAACACCGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGt < 2:15332/142‑1 (MQ=38) ttATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATGAGGCGTTCACGCCGCAGCCGGCAAGAACAACGAGCCAATAAAAATAACGGCGCGATGCCCGGATTCTTTTACGAAagggaaaa > 2:676832/1‑137 (MQ=255) ttATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCACTCAAAATACCGGCGGTATGCCGGGAGTTTTTTACGAAAGAGGT‑At > 1:759487/1‑143 (MQ=38) cAGGCGTACCTGGTTCCTCCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCaaa < 2:786288/143‑1 (MQ=255) cTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTGCGGAAGAGGA‑ATTAAGTGCGt > 1:520402/1‑143 (MQ=38) cTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGCAAGAGGT‑ATCAAATGCGt > 1:640/1‑143 (MQ=255) tACACCGTGCCCGTAATTTGTTGATTTTGCAAGACTTTGTGGGCCTGATAAGGCGTTCACGCCGCATCCGTCACAAACAATGAGCCAATAAAAATACCGGCGGTATGCCGTTATTTTTTTACGAAAGAGGT‑ATCAAATGCGtt < 2:255322/143‑1 (MQ=37) cATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATACGGCAAAAACAACGAGACAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTa < 2:739837/143‑1 (MQ=255) tCGTTGCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCTAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAAt > 2:759014/1‑143 (MQ=255) gTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATCACAAAACACGCGTTATGCAGTTATTTTCTTACGAAAACAGT‑ATCAAAGTCGTTCaaata > 2:791757/1‑140 (MQ=21) ggccTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATtgt < 1:656056/141‑1 (MQ=255) tGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTCCGAAAGAGGT‑ATCAAATGCGTTTACTGgtggtg > 1:832472/1‑143 (MQ=255) tGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCCAATGCGGTTAATTgtggtg > 2:833349/1‑143 (MQ=255) tGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTgtggtg > 2:709644/1‑143 (MQ=255) cAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGATCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAg > 1:126883/1‑143 (MQ=255) gATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGt > 2:207803/1‑143 (MQ=255) gATTTTGCAAGACTTTGTGGGTCGGAAAAGACGTTCAGGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGCTATGCCGGTATTTTTTTACGAAAGAGGC‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGt > 2:604168/1‑143 (MQ=255) aTTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATCAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATTCGTTTAAATGGGGTGACCCTCCTGGTg > 2:513919/1‑143 (MQ=38) aTTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTGTTTTTTTACGAAAGAGGT‑ATCACATGCGATCAGTTGCGGTGAGCATCATGGTg > 2:207378/1‑143 (MQ=38) ttttGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGa < 1:518756/143‑1 (MQ=255) ttttGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGa > 2:605381/1‑143 (MQ=255) tttGCAAGACTTTGTGGGTCGGCTAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAACTGCGTTTATTTGTGGTGAGCATCATGGTGAc > 1:275601/1‑143 (MQ=255) tttGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCATAACGCCGGTAt > 2:302070/1‑89 (MQ=25) tttGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCATAACGCCGGTAt < 1:302070/89‑1 (MQ=25) ttGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTGTAATTGTGGTGAGCATCATGGTGAcc > 1:367817/1‑143 (MQ=255) aaGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGc > 1:398422/1‑143 (MQ=255) aGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGGTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCt > 1:523434/1‑143 (MQ=255) gACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATAGCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAGTGCGTTTAAGTGTGGTGAGCATCGTGGTGACCGTGCTg > 2:566538/1‑143 (MQ=39) tgtgGGTCGGATAAGGCGCTCACGCCCCATCCGGCAAAAATAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAATGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTgg < 2:708029/143‑1 (MQ=255) ggTCGGATAAGGCGTTCACGCCGCACCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCtgt < 1:410446/143‑1 (MQ=255) tCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTgg > 1:333638/1‑143 (MQ=255) cGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGTCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGgc < 1:265047/143‑1 (MQ=255) gtaTAAGGCTTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGgca < 2:865710/141‑1 (MQ=255) ggCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTCCGAAAGAGGT‑ATCAAATGCGATGAATTGTGGTGAGACTCATGGTGACCTTGCTGCGTGGCTGTGGCAGCatta > 2:47290/1‑143 (MQ=255) aCGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑AGCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTCCTGAGTGGCCGTGGCAGCATTATTAGTCg > 2:177828/1‑143 (MQ=255) gctgcATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATGTTTTTACGAAGGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCa < 1:250143/140‑1 (MQ=255) gcATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACta < 2:55653/143‑1 (MQ=255) ccGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTCTGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAACTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACtatagc > 2:360819/1‑141 (MQ=255) ccGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTACTTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTCTGAGTCGCCCTACAcc > 2:701883/1‑143 (MQ=255) ggCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCgg < 1:605381/143‑1 (MQ=255) gCAACAACCACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCggg < 1:502554/143‑1 (MQ=255) gCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCCAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCggg > 1:361931/1‑143 (MQ=255) aacaacGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCggggcagg < 2:329121/143‑1 (MQ=255) aacaacGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCggggcagg < 1:207803/143‑1 (MQ=255) caacGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCCTTATTAGTCGCACTATACCggggcagggg > 2:828360/1‑143 (MQ=255) gAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTAAACCATTGTTCATTAAGT‑CGTTTCATCGGGATGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATg < 2:402516/143‑1 (MQ=255) ccAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCa > 1:799243/1‑143 (MQ=255) cAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCaa < 1:709644/143‑1 (MQ=255) taaaaaaaTACCGGCATAACGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTAACTCGAGGAGAGCATCATGGTGACATTGCTGAGTGGCTGTGGTCGCACTATTAGTCGCACTGTACTGGGGCAGGGGCATGGCAAc > 2:844279/4‑143 (MQ=255) aaTAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTAGTAGTCGCACTATACCGGGGCAGGGGCATGGCAAc > 1:672639/1‑143 (MQ=255) aaaaaTACCGGCGTTATGCCGGTATTTTTTTACGAACGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTCTACCGCGCCAGGGGCATCGccaccac > 2:117109/1‑142 (MQ=255) aaaaaTACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCaa < 2:615690/143‑1 (MQ=255) aaaaaTACCGGCGTTATGACGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCaa < 1:149752/143‑1 (MQ=255) aaaaTACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAat < 1:897577/143‑1 (MQ=255) aaaaTACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGCTGACCTTGCTGAGTGGCTGCGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAat > 1:464240/1‑143 (MQ=255) aaaTACCGGCGTTATGGCGGTATTTTTTGACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTGGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAata < 1:177828/143‑1 (MQ=255) aaaTACCGGCATAACGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGATGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCACCCAata > 1:752901/1‑143 (MQ=255) cGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTGGCACGATACCGGGGCAGGGGCATGGCGAGCACTATTATcc > 1:30694/1‑143 (MQ=255) cGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACTGGGGCAGGGGCATGGCAACCAATATTATcc > 1:315669/1‑143 (MQ=255) tATGCGGGTATTTTTTTACGAAAGAGGG‑ATCGAGTGCGTGTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAATATTATCCCGgtgt < 2:900750/143‑1 (MQ=255) aTGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAATATTATCCCGGtgtg < 2:126883/143‑1 (MQ=255) tGCCGGTATTTTTTTACGAAAGAGGT‑GTCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGCGTGGCTGTGGCCGGCGTATTAGTCGCGCTCTACCGGGGCAGGGGCATGGGAACCTATATGCTCCCGGTGTGc > 1:749648/1‑143 (MQ=255) | CGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGT‑ATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAATATTATCCCGGTGTGC > NC_000913/1113410‑1113690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |