| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3760164 | 27 (0.680) | 3 (0.080) | 3/256 | NT | 9.8% | coding (1086/1392 nt) | selA | selenocysteine synthase |
| ? | NC_000913 | = 3760190 | 29 (0.750) | coding (1060/1392 nt) | selA | selenocysteine synthase | |||||
TTAATGCCGCGCTCGGCAGGCGATCAACCGGCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCA > NC_000913/3760022‑3760306 | ttAGTGCCGCGCTCGGCAGGCGATCAACCGGCAGCGAACCACTGCCAATCTGTGAAAGACATGGAGTAACTTGTGCCGCAAGATCCGCGGCGTAATGTGCGGCATGGGGGGCATGTAAACGTTGTGCCTGGATTTGAATGACC < 2:730288‑M1/143‑1 (MQ=255) ccGCGCACGGCAGGCGATCAACCGGCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTctgcg < 2:748728/143‑1 (MQ=255) gcgcTCGGCAGGCGATCAACCGGCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTctgcgct > 1:681502/1‑143 (MQ=255) aGGCGATCAACCGGCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAACCACCTCTGCGCTGCGGGTAAg > 2:308379/1‑143 (MQ=255) cGGCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGCTTTGAATGACCTCTGCGCTGCGGGTACGCAGGCGCAGgg < 1:304766‑M2/143‑3 (MQ=255) ggCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGggt > 1:689509‑M2/1‑140 (MQ=255) gcatctaaccacgtCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCtctgcgcctgcttacccgcagcgcagaggt < 1:758760‑M1/137‑31 (MQ=255) aGCGAGCCACTGCCAATCTGCGAAAGACATGGCAGAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCgg < 2:139141/143‑1 (MQ=255) aGCGAACCACTGCCAATCTGCGAACGCCATGGCATAACCTGTGCCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCgg < 2:755120/143‑1 (MQ=255) gacgcACTGCCAATCTCCGAAATACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTaa < 1:37375/139‑1 (MQ=255) aaCCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAAt < 1:434014/143‑1 (MQ=255) aaCCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGACGGTAAt > 1:285650/1‑143 (MQ=255) ggCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCa < 1:348318/142‑1 (MQ=255) gAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCctgcgcctgcttacccgcagcgcagaggtc > 1:704462‑M1/1‑90 (MQ=255) gAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCctgcgcctgcttacccgcagcgcagaggtc < 2:704462‑M1/120‑31 (MQ=255) aaaGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCCGAGCTTCa > 1:429104/1‑143 (MQ=255) cATGGCATAACCGGTACCGCAAACTCCGCGCCATAATGTGCTTCTA‑GGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGgtgt < 1:144477/143‑1 (MQ=255) tGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCCAGGTACAGGTTACCGCTGCGCAGAACGTGAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGta > 1:536862/1‑143 (MQ=255) cTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGGCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGAc > 1:388995/1‑143 (MQ=255) aacccccGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAACCGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTgg < 1:384292/138‑1 (MQ=255) cTCCGCGCCGGAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCtt < 1:694166/143‑1 (MQ=255) cgcgCCGTACTGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCGGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATCTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCa < 2:157132/143‑1 (MQ=255) ggggcggaaTGTGCGGTCAGGGGGGCTCGTAAACGTTGTGCCTGGATTTGAAGGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAg < 2:328142/136‑1 (MQ=255) gcgcCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAg > 2:330008/1‑143 (MQ=255) ccGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAgcgc > 1:160429/1‑143 (MQ=255) ccGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGGAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAGCGTGGCTTCCAgcgc > 1:277597/1‑143 (MQ=255) cGTAATGTGCCGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGcgcc < 1:568063/143‑1 (MQ=255) gtgCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGAAGGGTCTGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAgg > 2:637925/1‑143 (MQ=255) aGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCAtttt < 1:715724/143‑1 (MQ=255) ccTTGATTTGAATGACCTCCGCGCTGCGGCTACGCAGGCGCAGGGTCGGTAATTTTTCACTCAGACCTTCAGCGTGTATATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTGATGCACGCTTc < 1:109702/143‑1 (MQ=255) tGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCAATCTATCCGCGCGTGATGCACGCTCCAg > 2:190435/1‑143 (MQ=255) ggATGTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGc < 2:23948/143‑1 (MQ=255) tttGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCGGGGTGTGACTAAAGAGGGAACGGTGCTTCCAGCGCCGCGAGGGTCATTTTATCCGGGCGTACTGCACGCTCCAGCggg > 2:682719/1‑143 (MQ=255) gACCTCTGCGCTGCGGGTAAGCAGGCGCAGggtcattcaaatccaggcacaacgtttacaggccccccttgccgcacattacggcgcggagtttgcggtacaggttatgccatgtctttc < 2:704462‑M2/120‑91 (MQ=255) gACCTCTGCGCTGCGGGTAAGCAGGCGCAGggtcattcaaatccaggcacaacgtttacaggccccccttgccgcacattacggcgcggagtttgcggtacaggttatgccatgtctttc > 1:704462‑M2/1‑30 (MQ=255) cccTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTg < 1:455498/142‑1 (MQ=255) aCCctgcgcctgcttacccgcagcgcagaggtcattcaaatccaggcacaacgtttacaggccccccttgccgcacattacggcgcggagtttgcggtacaggttatgccatgtctttcgcagattggcagtggttcgctgcc > 1:689509‑M1/1‑3 (MQ=255) aCCTCTGCGCTGCGGGTAAGCAGGCGCAGaggtcattcaaatccaggcacaacgtttacaggccccccttgccgcacattacggcgcggagtttgcggtacaggttatgccatgtctttcgcagattggacgtggttagatgc < 1:758760‑M2/143‑115 (MQ=255) ccctgcgcctgcgtacccgcagcgcagaggtcattcaaagccaggcacaacgtttacaggccccccttgccgcacattacggcgcggagtttgcggtacaggttatgccatgtctttcgcagattggcagtggttcgctgccg < 1:304766‑M1/143‑142 (MQ=255) ctctGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCCTTTTATCCGCGCGTAGTGCACGCTTCAGCGGGCGGCTTTGCa > 2:272643/1‑143 (MQ=255) | TTAATGCCGCGCTCGGCAGGCGATCAACCGGCAGCGAACCACTGCCAATCTGCGAAAGACATGGCATAACCTGTACCGCAAACTCCGCGCCGTAATGTGCGGCAAGGGGGGCCTGTAAACGTTGTGCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCA > NC_000913/3760022‑3760306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |